RNA–Protein interactions for RNA: ENST00000466415.1

VPS16-206, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 2

Gene VPS16, Length 708 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-206ENST00000466415 KLHDC9Q8NEP7 349 aa13.32□□□□□ -0.28
VPS16-206ENST00000466415 VTI1AQ96AJ9 217 aa13.32□□□□□ -0.28
VPS16-206ENST00000466415 ZBTB10Q96DT7 871 aa13.32□□□□□ -0.28
VPS16-206ENST00000466415 NTPCRQ9BSD7 190 aaKnown RBP13.32□□□□□ -0.28
VPS16-206ENST00000466415 STRA6Q9BX79 667 aa13.32□□□□□ -0.28
VPS16-206ENST00000466415 HSD3B7Q9H2F3 369 aa13.32□□□□□ -0.28
VPS16-206ENST00000466415 IFNKQ9P0W0 207 aa13.32□□□□□ -0.28
VPS16-206ENST00000466415 CGNQ9P2M7 1197 aaKnown RBP13.32□□□□□ -0.28
VPS16-206ENST00000466415 ADGRA3Q8IWK6 1321 aa13.32□□□□□ -0.28
VPS16-206ENST00000466415 K7ERI5 159 aa13.31□□□□□ -0.28
VPS16-206ENST00000466415 PES1O00541 588 aaKnown RBP13.31□□□□□ -0.28
VPS16-206ENST00000466415 CLIC2O15247 247 aa13.31□□□□□ -0.28
VPS16-206ENST00000466415 GNA14O95837 355 aa13.31□□□□□ -0.28
VPS16-206ENST00000466415 NR3C1P04150 777 aa13.31□□□□□ -0.28
VPS16-206ENST00000466415 EPB41P11171 864 aaKnown RBP13.31□□□□□ -0.28
VPS16-206ENST00000466415 HOXD13P35453 343 aa13.31□□□□□ -0.28
VPS16-206ENST00000466415 PHKA2P46019 1235 aa13.31□□□□□ -0.28
VPS16-206ENST00000466415 LIG4P49917 911 aa13.31□□□□□ -0.28
VPS16-206ENST00000466415 ZNF75DP51815 510 aa13.31□□□□□ -0.28
VPS16-206ENST00000466415 UBASH3AP57075 661 aa13.31□□□□□ -0.28
VPS16-206ENST00000466415 SNRPFP62306 86 aaKnown RBP13.31□□□□□ -0.28
VPS16-206ENST00000466415 MKRN4PQ13434 485 aaPredicted RBP13.31□□□□□ -0.28
VPS16-206ENST00000466415 ADAM9Q13443 819 aa13.31□□□□□ -0.28
VPS16-206ENST00000466415 TCP11X2Q5H9J9 407 aa13.31□□□□□ -0.28
VPS16-206ENST00000466415 ARMCX5Q6P1M9 558 aa13.31□□□□□ -0.28
VPS16-206ENST00000466415 CTU1Q7Z7A3 348 aaKnown RBP13.31□□□□□ -0.28
VPS16-206ENST00000466415 DRC7Q8IY82 874 aa13.31□□□□□ -0.28
VPS16-206ENST00000466415 ARRDC4Q8NCT1 418 aa13.31□□□□□ -0.28
VPS16-206ENST00000466415 PPP1R13LQ8WUF5 828 aa13.31□□□□□ -0.28
VPS16-206ENST00000466415 FAM49AQ9H0Q0 323 aaPredicted RBP13.31□□□□□ -0.28
VPS16-206ENST00000466415 AGPAT3Q9NRZ7 376 aa13.31□□□□□ -0.28
VPS16-206ENST00000466415 TAB2Q9NYJ8 693 aa13.31□□□□□ -0.28
VPS16-206ENST00000466415 HDAC6Q9UBN7 1215 aa13.31□□□□□ -0.28
VPS16-206ENST00000466415 SMIM35A0A1B0GVV1 85 aa13.3□□□□□ -0.28
VPS16-206ENST00000466415 MOXD2PA6NHM9 499 aa13.3□□□□□ -0.28
VPS16-206ENST00000466415 KBTBD13C9JR72 458 aa13.3□□□□□ -0.28
VPS16-206ENST00000466415 HNRNPDLO14979 420 aaKnown RBP13.3□□□□□ -0.28
VPS16-206ENST00000466415 TGFB1I1O43294 461 aa13.3□□□□□ -0.28
VPS16-206ENST00000466415 AP5Z1O43299 807 aa13.3□□□□□ -0.28
VPS16-206ENST00000466415 MYCP01106 439 aaPredicted RBP13.3□□□□□ -0.28
VPS16-206ENST00000466415 VTNP04004 478 aa13.3□□□□□ -0.28
VPS16-206ENST00000466415 PRKCSHP14314 528 aaPredicted RBP13.3□□□□□ -0.28
VPS16-206ENST00000466415 MATR3P43243 847 aaKnown RBP eCLIP13.3□□□□□ -0.28
VPS16-206ENST00000466415 CTCFP49711 727 aaPredicted RBP13.3□□□□□ -0.28
VPS16-206ENST00000466415 CYP2J2P51589 502 aa13.3□□□□□ -0.28
VPS16-206ENST00000466415 KRT31Q15323 416 aa13.3□□□□□ -0.28
VPS16-206ENST00000466415 NFIL3Q16649 462 aa13.3□□□□□ -0.28
VPS16-206ENST00000466415 TMEM132AQ24JP5 1023 aa13.3□□□□□ -0.28
VPS16-206ENST00000466415 NBPF20Q3BBV1 942 aa13.3□□□□□ -0.28
VPS16-206ENST00000466415 MARCH8Q5T0T0 291 aa13.3□□□□□ -0.28
VPS16-206ENST00000466415 CEP135Q66GS9 1140 aa13.3□□□□□ -0.28
VPS16-206ENST00000466415 CDCA2Q69YH5 1023 aaPredicted RBP13.3□□□□□ -0.28
VPS16-206ENST00000466415 LRRC55Q6ZSA7 311 aa13.3□□□□□ -0.28
VPS16-206ENST00000466415 FILIP1Q7Z7B0 1213 aa13.3□□□□□ -0.28
VPS16-206ENST00000466415 LINC01465Q8N7H1 131 aa13.3□□□□□ -0.28
VPS16-206ENST00000466415 NLRP7Q8WX94 980 aa13.3□□□□□ -0.28
VPS16-206ENST00000466415 EEF2KMTQ96G04 330 aa13.3□□□□□ -0.28
VPS16-206ENST00000466415 PPP1R16BQ96T49 567 aa13.3□□□□□ -0.28
VPS16-206ENST00000466415 XPO4Q9C0E2 1151 aaKnown RBP13.3□□□□□ -0.28
VPS16-206ENST00000466415 UNC93B1Q9H1C4 597 aa13.3□□□□□ -0.28
VPS16-206ENST00000466415 TMEM134Q9H6X4 195 aa13.3□□□□□ -0.28
VPS16-206ENST00000466415 LIMA1Q9UHB6 759 aaKnown RBP13.3□□□□□ -0.28
VPS16-206ENST00000466415 FRMD4BQ9Y2L6 1034 aa13.3□□□□□ -0.28
VPS16-206ENST00000466415 MBLAC1A4D2B0 266 aaPredicted RBP13.29□□□□□ -0.28
VPS16-206ENST00000466415 GOLGA6L6A8MZA4 724 aa13.29□□□□□ -0.28
VPS16-206ENST00000466415 INO80B-WBP1J3KQ70 363 aa13.29□□□□□ -0.28
VPS16-206ENST00000466415 SLC16A3O15427 465 aaKnown RBP13.29□□□□□ -0.28
VPS16-206ENST00000466415 EXOC3O60645 756 aa13.29□□□□□ -0.28
VPS16-206ENST00000466415 PRKCBP05771 671 aa13.29□□□□□ -0.28
VPS16-206ENST00000466415 GJB1P08034 283 aa13.29□□□□□ -0.28
VPS16-206ENST00000466415 HSPA1AP0DMV8 641 aaKnown RBP13.29□□□□□ -0.28
VPS16-206ENST00000466415 HSPA1BP0DMV9 641 aaKnown RBP13.29□□□□□ -0.28
VPS16-206ENST00000466415 ACLYP53396 1101 aa13.29□□□□□ -0.28
VPS16-206ENST00000466415 COPB1P53618 953 aaKnown RBP13.29□□□□□ -0.28
VPS16-206ENST00000466415 CDC42EP1Q00587 391 aa13.29□□□□□ -0.28
VPS16-206ENST00000466415 MYBPC2Q14324 1141 aa13.29□□□□□ -0.28
VPS16-206ENST00000466415 MAPK6Q16659 721 aa13.29□□□□□ -0.28
VPS16-206ENST00000466415 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.29□□□□□ -0.28
VPS16-206ENST00000466415 ZNF410Q86VK4 478 aa13.29□□□□□ -0.28
VPS16-206ENST00000466415 ZC3H3Q8IXZ2 948 aaKnown RBP13.29□□□□□ -0.28
VPS16-206ENST00000466415 KCNN1Q92952 543 aa13.29□□□□□ -0.28
VPS16-206ENST00000466415 MRFAP1L1Q96HT8 127 aa13.29□□□□□ -0.28
VPS16-206ENST00000466415 ZNF668Q96K58 619 aaPredicted RBP13.29□□□□□ -0.28
VPS16-206ENST00000466415 GLT1D1Q96MS3 346 aa13.29□□□□□ -0.28
VPS16-206ENST00000466415 TSEN34Q9BSV6 310 aaKnown RBP13.29□□□□□ -0.28
VPS16-206ENST00000466415 MRPL4Q9BYD3 311 aaKnown RBP13.29□□□□□ -0.28
VPS16-206ENST00000466415 INO80BQ9C086 356 aaPredicted RBP13.29□□□□□ -0.28
VPS16-206ENST00000466415 GTF2IRD1Q9UHL9 959 aa13.29□□□□□ -0.28
VPS16-206ENST00000466415 M0QZ92 97 aa13.28□□□□□ -0.28
VPS16-206ENST00000466415 N4BP3O15049 544 aa13.28□□□□□ -0.28
VPS16-206ENST00000466415 TREHO43280 583 aa13.28□□□□□ -0.28
VPS16-206ENST00000466415 PTMAP06454 111 aaKnown RBP13.28□□□□□ -0.28
VPS16-206ENST00000466415 CCL5P13501 91 aa13.28□□□□□ -0.28
VPS16-206ENST00000466415 CDC25BP30305 580 aa13.28□□□□□ -0.28
VPS16-206ENST00000466415 PSMC2P35998 433 aaKnown RBP13.28□□□□□ -0.28
VPS16-206ENST00000466415 PTENP60484 403 aa13.28□□□□□ -0.28
VPS16-206ENST00000466415 HSP90AA2PQ14568 343 aaPredicted RBP13.28□□□□□ -0.28
VPS16-206ENST00000466415 LHX8Q68G74 356 aa13.28□□□□□ -0.28
VPS16-206ENST00000466415 CCSAPQ6IQ19 270 aaPredicted RBP13.28□□□□□ -0.28
VPS16-206ENST00000466415 TAF2Q6P1X5 1199 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms