RNA–Protein interactions for RNA: ENST00000466392.1

EDEM3-204, Transcript of ER degradation enhancing alpha-mannosidase like protein 3, humanhuman

TSL 5

Gene EDEM3, Length 491 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM3-204ENST00000466392 KIFC3Q9BVG8 833 aa13.1□□□□□ -0.31
EDEM3-204ENST00000466392 RUSC1Q9BVN2 902 aa13.1□□□□□ -0.31
EDEM3-204ENST00000466392 USP20Q9Y2K6 914 aa13.1□□□□□ -0.31
EDEM3-204ENST00000466392 A0A0U1RQF3 1178 aa13.09□□□□□ -0.31
EDEM3-204ENST00000466392 GRM6O15303 877 aa13.09□□□□□ -0.31
EDEM3-204ENST00000466392 GTPBP6O43824 516 aaPredicted RBP13.09□□□□□ -0.31
EDEM3-204ENST00000466392 TSPAN1O60635 241 aa13.09□□□□□ -0.31
EDEM3-204ENST00000466392 ERLIN2O94905 339 aa13.09□□□□□ -0.31
EDEM3-204ENST00000466392 EYA4O95677 639 aa13.09□□□□□ -0.31
EDEM3-204ENST00000466392 EDN1P05305 212 aa13.09□□□□□ -0.31
EDEM3-204ENST00000466392 SSBP05455 408 aaKnown RBP eCLIP13.09□□□□□ -0.31
EDEM3-204ENST00000466392 LIG1P18858 919 aa13.09□□□□□ -0.31
EDEM3-204ENST00000466392 CYP11B2P19099 503 aa13.09□□□□□ -0.31
EDEM3-204ENST00000466392 MUTP22033 750 aa13.09□□□□□ -0.31
EDEM3-204ENST00000466392 BMPR1AP36894 532 aa13.09□□□□□ -0.31
EDEM3-204ENST00000466392 PBX3P40426 434 aa13.09□□□□□ -0.31
EDEM3-204ENST00000466392 RAD51AP2Q09MP3 1159 aa13.09□□□□□ -0.31
EDEM3-204ENST00000466392 TFDP1Q14186 410 aa13.09□□□□□ -0.31
EDEM3-204ENST00000466392 AMHR2Q16671 573 aa13.09□□□□□ -0.31
EDEM3-204ENST00000466392 UBXN11Q5T124 520 aa13.09□□□□□ -0.31
EDEM3-204ENST00000466392 SPOUT1Q5T280 376 aaKnown RBP13.09□□□□□ -0.31
EDEM3-204ENST00000466392 ARL6IP4Q66PJ3 421 aaKnown RBP13.09□□□□□ -0.31
EDEM3-204ENST00000466392 LRRC55Q6ZSA7 311 aa13.09□□□□□ -0.31
EDEM3-204ENST00000466392 ZNF598Q86UK7 904 aaKnown RBP13.09□□□□□ -0.31
EDEM3-204ENST00000466392 CABP7Q86V35 215 aa13.09□□□□□ -0.31
EDEM3-204ENST00000466392 SLC17A8Q8NDX2 589 aa13.09□□□□□ -0.31
EDEM3-204ENST00000466392 MCPH1Q8NEM0 835 aa13.09□□□□□ -0.31
EDEM3-204ENST00000466392 PRUNE2Q8WUY3 3088 aa13.09□□□□□ -0.31
EDEM3-204ENST00000466392 CLP1Q92989 425 aaKnown RBP13.09□□□□□ -0.31
EDEM3-204ENST00000466392 CASD1Q96PB1 797 aa13.09□□□□□ -0.31
EDEM3-204ENST00000466392 USP28Q96RU2 1077 aa13.09□□□□□ -0.31
EDEM3-204ENST00000466392 EIF2AQ9BY44 585 aaKnown RBP13.09□□□□□ -0.31
EDEM3-204ENST00000466392 ELAC1Q9H777 363 aaKnown RBP13.09□□□□□ -0.31
EDEM3-204ENST00000466392 ALG13Q9NP73 1137 aaKnown RBP13.09□□□□□ -0.31
EDEM3-204ENST00000466392 FAM105AQ9NUU6 356 aa13.09□□□□□ -0.31
EDEM3-204ENST00000466392 TYW1Q9NV66 732 aaKnown RBP13.09□□□□□ -0.31
EDEM3-204ENST00000466392 DACT1Q9NYF0 836 aa13.09□□□□□ -0.31
EDEM3-204ENST00000466392 TTLL13PA6NNM8 815 aa13.08□□□□□ -0.32
EDEM3-204ENST00000466392 H3BNC9 293 aa13.08□□□□□ -0.32
EDEM3-204ENST00000466392 CACNB1Q02641 598 aaPredicted RBP13.08□□□□□ -0.32
EDEM3-204ENST00000466392 KARSQ15046 597 aaKnown RBP13.08□□□□□ -0.32
EDEM3-204ENST00000466392 USP49Q70CQ1 688 aa13.08□□□□□ -0.32
EDEM3-204ENST00000466392 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.08□□□□□ -0.32
EDEM3-204ENST00000466392 SAMD11Q96NU1 681 aa13.08□□□□□ -0.32
EDEM3-204ENST00000466392 CLIC6Q96NY7 704 aa13.08□□□□□ -0.32
EDEM3-204ENST00000466392 CSRNP2Q9H175 543 aa13.08□□□□□ -0.32
EDEM3-204ENST00000466392 CWH43Q9H720 699 aa13.08□□□□□ -0.32
EDEM3-204ENST00000466392 CHST12Q9NRB3 414 aa13.08□□□□□ -0.32
EDEM3-204ENST00000466392 FBXO2Q9UK22 296 aaPredicted RBP13.08□□□□□ -0.32
EDEM3-204ENST00000466392 DNM3Q9UQ16 869 aa13.08□□□□□ -0.32
EDEM3-204ENST00000466392 HES2Q9Y543 173 aa13.08□□□□□ -0.32
EDEM3-204ENST00000466392 TDRD15B5MCY1 1934 aaKnown RBP13.07□□□□□ -0.32
EDEM3-204ENST00000466392 NPHP3-ACAD11A0A0J9YXS1 232 aa13.07□□□□□ -0.32
EDEM3-204ENST00000466392 SFI1A8K8P3 1242 aa13.07□□□□□ -0.32
EDEM3-204ENST00000466392 C5orf67F2Z3F1 127 aa13.07□□□□□ -0.32
EDEM3-204ENST00000466392 ARF4P18085 180 aaPredicted RBP13.07□□□□□ -0.32
EDEM3-204ENST00000466392 POU3F3P20264 500 aaPredicted RBP13.07□□□□□ -0.32
EDEM3-204ENST00000466392 DNAJB1P25685 340 aa13.07□□□□□ -0.32
EDEM3-204ENST00000466392 AFF1P51825 1210 aaKnown RBP13.07□□□□□ -0.32
EDEM3-204ENST00000466392 DHX8Q14562 1220 aaKnown RBP13.07□□□□□ -0.32
EDEM3-204ENST00000466392 SKIV2LQ15477 1246 aaKnown RBP13.07□□□□□ -0.32
EDEM3-204ENST00000466392 TMEM119Q4V9L6 283 aa13.07□□□□□ -0.32
EDEM3-204ENST00000466392 HYIQ5T013 277 aa13.07□□□□□ -0.32
EDEM3-204ENST00000466392 RINT1Q6NUQ1 792 aa13.07□□□□□ -0.32
EDEM3-204ENST00000466392 IFNLR1Q8IU57 520 aaPredicted RBP13.07□□□□□ -0.32
EDEM3-204ENST00000466392 ABI1Q8IZP0 508 aa13.07□□□□□ -0.32
EDEM3-204ENST00000466392 DAW1Q8N136 415 aa13.07□□□□□ -0.32
EDEM3-204ENST00000466392 KLHL23Q8NBE8 558 aa13.07□□□□□ -0.32
EDEM3-204ENST00000466392 EPSTI1Q96J88 318 aa13.07□□□□□ -0.32
EDEM3-204ENST00000466392 CDK5RAP3Q96JB5 506 aa13.07□□□□□ -0.32
EDEM3-204ENST00000466392 TMEM117Q9H0C3 514 aa13.07□□□□□ -0.32
EDEM3-204ENST00000466392 TFIP11Q9UBB9 837 aaKnown RBP13.07□□□□□ -0.32
EDEM3-204ENST00000466392 INPP5FQ9Y2H2 1132 aa13.07□□□□□ -0.32
EDEM3-204ENST00000466392 PCDHB2Q9Y5E7 798 aa13.07□□□□□ -0.32
EDEM3-204ENST00000466392 STK24Q9Y6E0 443 aa13.07□□□□□ -0.32
EDEM3-204ENST00000466392 UNC80Q8N2C7 3258 aa13.07□□□□□ -0.32
EDEM3-204ENST00000466392 HIP1RO75146 1068 aa13.06□□□□□ -0.32
EDEM3-204ENST00000466392 BMP15O95972 392 aa13.06□□□□□ -0.32
EDEM3-204ENST00000466392 ITGB1P05556 798 aa13.06□□□□□ -0.32
EDEM3-204ENST00000466392 UBA7P41226 1012 aa13.06□□□□□ -0.32
EDEM3-204ENST00000466392 MAPK7Q13164 816 aa13.06□□□□□ -0.32
EDEM3-204ENST00000466392 CDCA2Q69YH5 1023 aaPredicted RBP13.06□□□□□ -0.32
EDEM3-204ENST00000466392 AGMOQ6ZNB7 445 aa13.06□□□□□ -0.32
EDEM3-204ENST00000466392 C1orf186Q6ZWK4 172 aa13.06□□□□□ -0.32
EDEM3-204ENST00000466392 COLGALT1Q8NBJ5 622 aa13.06□□□□□ -0.32
EDEM3-204ENST00000466392 SMG8Q8ND04 991 aaKnown RBP13.06□□□□□ -0.32
EDEM3-204ENST00000466392 C11orf84Q9BUA3 381 aaPredicted RBP13.06□□□□□ -0.32
EDEM3-204ENST00000466392 TRAIPQ9BWF2 469 aa13.06□□□□□ -0.32
EDEM3-204ENST00000466392 APOL6Q9BWW8 343 aa13.06□□□□□ -0.32
EDEM3-204ENST00000466392 RNF39Q9H2S5 420 aa13.06□□□□□ -0.32
EDEM3-204ENST00000466392 ZSCAN16Q9H4T2 348 aaPredicted RBP13.06□□□□□ -0.32
EDEM3-204ENST00000466392 DAXXQ9UER7 740 aaPredicted RBP13.06□□□□□ -0.32
EDEM3-204ENST00000466392 IPPQ9Y573 584 aa13.06□□□□□ -0.32
EDEM3-204ENST00000466392 PCDHGC5Q9Y5F6 944 aa13.06□□□□□ -0.32
EDEM3-204ENST00000466392 MYO7AQ13402 2215 aa13.06□□□□□ -0.32
EDEM3-204ENST00000466392 NT5C1B-RDH14C9J2C7 533 aa13.05□□□□□ -0.32
EDEM3-204ENST00000466392 B4GALT3O60512 393 aa13.05□□□□□ -0.32
EDEM3-204ENST00000466392 NPTXRO95502 500 aa13.05□□□□□ -0.32
EDEM3-204ENST00000466392 EOMESO95936 686 aa13.05□□□□□ -0.32
EDEM3-204ENST00000466392 PLA2G4BP0C869 781 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms