RNA–Protein interactions for RNA: ENST00000466054.1

LRCH3-211, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 2

Gene LRCH3, Length 683 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-211ENST00000466054 CXXC5Q7LFL8 322 aaKnown RBP5.97□□□□□ -1.45
LRCH3-211ENST00000466054 STRA8Q7Z7C7 330 aa5.97□□□□□ -1.45
LRCH3-211ENST00000466054 C11orf74Q86VG3 221 aa5.97□□□□□ -1.45
LRCH3-211ENST00000466054 SYNE4Q8N205 404 aa5.97□□□□□ -1.45
LRCH3-211ENST00000466054 KIAA1958Q8N8K9 716 aa5.97□□□□□ -1.45
LRCH3-211ENST00000466054 GPR150Q8NGU9 434 aa5.97□□□□□ -1.45
LRCH3-211ENST00000466054 CHTF18Q8WVB6 975 aa5.97□□□□□ -1.45
LRCH3-211ENST00000466054 THG1LQ9NWX6 298 aaKnown RBP5.97□□□□□ -1.45
LRCH3-211ENST00000466054 ATP8A1Q9Y2Q0 1164 aa5.97□□□□□ -1.45
LRCH3-211ENST00000466054 PRAMEF25A6NGN4 478 aa5.96□□□□□ -1.46
LRCH3-211ENST00000466054 FOXP2O15409 715 aa5.96□□□□□ -1.46
LRCH3-211ENST00000466054 CDK4P11802 303 aa5.96□□□□□ -1.46
LRCH3-211ENST00000466054 C21orf58P58505 322 aa5.96□□□□□ -1.46
LRCH3-211ENST00000466054 SEC23AQ15436 765 aa5.96□□□□□ -1.46
LRCH3-211ENST00000466054 EPHA10Q5JZY3 1008 aa5.96□□□□□ -1.46
LRCH3-211ENST00000466054 STRIP1Q5VSL9 837 aa5.96□□□□□ -1.46
LRCH3-211ENST00000466054 MBNL2Q5VZF2 373 aaKnown RBP5.96□□□□□ -1.46
LRCH3-211ENST00000466054 BHLHA9Q7RTU4 235 aa5.96□□□□□ -1.46
LRCH3-211ENST00000466054 GSPT2Q8IYD1 628 aaKnown RBP5.96□□□□□ -1.46
LRCH3-211ENST00000466054 ZZZ3Q8IYH5 903 aa5.96□□□□□ -1.46
LRCH3-211ENST00000466054 GPATCH3Q96I76 525 aa5.96□□□□□ -1.46
LRCH3-211ENST00000466054 GPR101Q96P66 508 aaPredicted RBP5.96□□□□□ -1.46
LRCH3-211ENST00000466054 ASB1Q9Y576 335 aa5.96□□□□□ -1.46
LRCH3-211ENST00000466054 NEMP1O14524 444 aa5.95□□□□□ -1.46
LRCH3-211ENST00000466054 DVL2O14641 736 aa5.95□□□□□ -1.46
LRCH3-211ENST00000466054 AOAHP28039 575 aa5.95□□□□□ -1.46
LRCH3-211ENST00000466054 CD38P28907 300 aa5.95□□□□□ -1.46
LRCH3-211ENST00000466054 IL13RA1P78552 427 aa5.95□□□□□ -1.46
LRCH3-211ENST00000466054 SLC25A3Q00325 362 aa5.95□□□□□ -1.46
LRCH3-211ENST00000466054 TMEM132BQ14DG7 1078 aa5.95□□□□□ -1.46
LRCH3-211ENST00000466054 GPR158Q5T848 1215 aa5.95□□□□□ -1.46
LRCH3-211ENST00000466054 RNF219Q5W0B1 726 aaPredicted RBP5.95□□□□□ -1.46
LRCH3-211ENST00000466054 SPTY2D1Q68D10 685 aaPredicted RBP5.95□□□□□ -1.46
LRCH3-211ENST00000466054 DDX42Q86XP3 938 aaKnown RBP eCLIP5.95□□□□□ -1.46
LRCH3-211ENST00000466054 NME9Q86XW9 330 aa5.95□□□□□ -1.46
LRCH3-211ENST00000466054 ATL2Q8NHH9 583 aa5.95□□□□□ -1.46
LRCH3-211ENST00000466054 EMC7Q9NPA0 242 aa5.95□□□□□ -1.46
LRCH3-211ENST00000466054 GPRC5BQ9NZH0 403 aa5.95□□□□□ -1.46
LRCH3-211ENST00000466054 HECAQ9UBI9 543 aaPredicted RBP5.95□□□□□ -1.46
LRCH3-211ENST00000466054 hCG_2014768A0A024R1R8 64 aa5.94□□□□□ -1.46
LRCH3-211ENST00000466054 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP5.94□□□□□ -1.46
LRCH3-211ENST00000466054 A0A1W2PRX2 142 aa5.94□□□□□ -1.46
LRCH3-211ENST00000466054 ZAR1LA6NP61 321 aa5.94□□□□□ -1.46
LRCH3-211ENST00000466054 KRTAP29-1A8MX34 341 aaPredicted RBP5.94□□□□□ -1.46
LRCH3-211ENST00000466054 ULK1O75385 1050 aa5.94□□□□□ -1.46
LRCH3-211ENST00000466054 SLC9A1P19634 815 aa5.94□□□□□ -1.46
LRCH3-211ENST00000466054 PTGS1P23219 599 aa5.94□□□□□ -1.46
LRCH3-211ENST00000466054 MAN2A2P49641 1150 aa5.94□□□□□ -1.46
LRCH3-211ENST00000466054 IGBP1P78318 339 aa5.94□□□□□ -1.46
LRCH3-211ENST00000466054 PHC1P78364 1004 aa5.94□□□□□ -1.46
LRCH3-211ENST00000466054 ADCY1Q08828 1119 aa5.94□□□□□ -1.46
LRCH3-211ENST00000466054 STAT4Q14765 748 aa5.94□□□□□ -1.46
LRCH3-211ENST00000466054 EIF4HQ15056 248 aaKnown RBP5.94□□□□□ -1.46
LRCH3-211ENST00000466054 EPHA7Q15375 998 aa5.94□□□□□ -1.46
LRCH3-211ENST00000466054 CATSPEREQ5SY80 951 aa5.94□□□□□ -1.46
LRCH3-211ENST00000466054 WDR66Q8TBY9 1149 aa5.94□□□□□ -1.46
LRCH3-211ENST00000466054 E2F7Q96AV8 911 aa5.94□□□□□ -1.46
LRCH3-211ENST00000466054 ELF4Q99607 663 aaPredicted RBP5.94□□□□□ -1.46
LRCH3-211ENST00000466054 FAM126AQ9BYI3 521 aaPredicted RBP5.94□□□□□ -1.46
LRCH3-211ENST00000466054 INCENPQ9NQS7 918 aa5.94□□□□□ -1.46
LRCH3-211ENST00000466054 SPTLC3Q9NUV7 552 aa5.94□□□□□ -1.46
LRCH3-211ENST00000466054 PACSIN3Q9UKS6 424 aa5.94□□□□□ -1.46
LRCH3-211ENST00000466054 GPR39O43194 453 aa5.93□□□□□ -1.46
LRCH3-211ENST00000466054 SCNN1GP51170 649 aa5.93□□□□□ -1.46
LRCH3-211ENST00000466054 ANAPC15P60006 121 aa5.93□□□□□ -1.46
LRCH3-211ENST00000466054 FAPQ12884 760 aa5.93□□□□□ -1.46
LRCH3-211ENST00000466054 RIN1Q13671 783 aa5.93□□□□□ -1.46
LRCH3-211ENST00000466054 LRRC32Q14392 662 aa5.93□□□□□ -1.46
LRCH3-211ENST00000466054 PTPAQ15257 358 aa5.93□□□□□ -1.46
LRCH3-211ENST00000466054 ATP13A4Q4VNC1 1196 aa5.93□□□□□ -1.46
LRCH3-211ENST00000466054 NECAB2Q7Z6G3 386 aa5.93□□□□□ -1.46
LRCH3-211ENST00000466054 SPATS2Q86XZ4 545 aaKnown RBP5.93□□□□□ -1.46
LRCH3-211ENST00000466054 SLC25A43Q8WUT9 341 aaPredicted RBP5.93□□□□□ -1.46
LRCH3-211ENST00000466054 ASB15Q8WXK1 588 aa5.93□□□□□ -1.46
LRCH3-211ENST00000466054 MIEF2Q96C03 454 aa5.93□□□□□ -1.46
LRCH3-211ENST00000466054 C16orf92Q96LL3 132 aa5.93□□□□□ -1.46
LRCH3-211ENST00000466054 GBP4Q96PP9 640 aa5.93□□□□□ -1.46
LRCH3-211ENST00000466054 GALNT8Q9NY28 637 aa5.93□□□□□ -1.46
LRCH3-211ENST00000466054 H2AFY2Q9P0M6 372 aaPredicted RBP5.93□□□□□ -1.46
LRCH3-211ENST00000466054 BTBD7Q9P203 1132 aa5.93□□□□□ -1.46
LRCH3-211ENST00000466054 SH3BP1Q9Y3L3 701 aa5.93□□□□□ -1.46
LRCH3-211ENST00000466054 A0A0A6YYK5 440 aaPredicted RBP5.92□□□□□ -1.46
LRCH3-211ENST00000466054 A0A0G2JNJ9 132 aa5.92□□□□□ -1.46
LRCH3-211ENST00000466054 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP5.92□□□□□ -1.46
LRCH3-211ENST00000466054 RASSF10A6NK89 507 aa5.92□□□□□ -1.46
LRCH3-211ENST00000466054 ALG1L2C9J202 215 aa5.92□□□□□ -1.46
LRCH3-211ENST00000466054 GOLGA6L22H0YM25 854 aa5.92□□□□□ -1.46
LRCH3-211ENST00000466054 TGM5O43548 720 aa5.92□□□□□ -1.46
LRCH3-211ENST00000466054 FAM20BO75063 409 aa5.92□□□□□ -1.46
LRCH3-211ENST00000466054 MMEP08473 750 aa5.92□□□□□ -1.46
LRCH3-211ENST00000466054 CDK11BP21127 795 aaKnown RBP5.92□□□□□ -1.46
LRCH3-211ENST00000466054 PROZP22891 400 aa5.92□□□□□ -1.46
LRCH3-211ENST00000466054 CD40P25942 277 aa5.92□□□□□ -1.46
LRCH3-211ENST00000466054 LSP1P33241 339 aa5.92□□□□□ -1.46
LRCH3-211ENST00000466054 KRTAP10-11P60412 298 aa5.92□□□□□ -1.46
LRCH3-211ENST00000466054 SMAD3P84022 425 aaKnown RBP5.92□□□□□ -1.46
LRCH3-211ENST00000466054 Q6ZRM9 215 aa5.92□□□□□ -1.46
LRCH3-211ENST00000466054 ADGRG3Q86Y34 549 aa5.92□□□□□ -1.46
LRCH3-211ENST00000466054 ZNF610Q8N9Z0 462 aa5.92□□□□□ -1.46
LRCH3-211ENST00000466054 TOMM22Q9NS69 142 aa5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms