RNA–Protein interactions for RNA: ENST00000465980.1

ATG3-203, Transcript of autophagy related 3, humanhuman

TSL 2

Gene ATG3, Length 560 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-203ENST00000465980 IFIH1Q9BYX4 1025 aaKnown RBP10.59□□□□□ -0.71
ATG3-203ENST00000465980 FAM49AQ9H0Q0 323 aaPredicted RBP10.59□□□□□ -0.71
ATG3-203ENST00000465980 GLT8D2Q9H1C3 349 aa10.59□□□□□ -0.71
ATG3-203ENST00000465980 SMARCAD1Q9H4L7 1026 aa10.59□□□□□ -0.71
ATG3-203ENST00000465980 AZI2Q9H6S1 392 aa10.59□□□□□ -0.71
ATG3-203ENST00000465980 AGO4Q9HCK5 861 aaKnown RBP10.59□□□□□ -0.71
ATG3-203ENST00000465980 RCOR1Q9UKL0 485 aa10.59□□□□□ -0.71
ATG3-203ENST00000465980 LOC100996750A0A140TA64 210 aa10.58□□□□□ -0.72
ATG3-203ENST00000465980 CAND2O75155 1236 aa10.58□□□□□ -0.72
ATG3-203ENST00000465980 PRPF40AO75400 957 aaKnown RBP10.58□□□□□ -0.72
ATG3-203ENST00000465980 CHRNA1P02708 482 aa10.58□□□□□ -0.72
ATG3-203ENST00000465980 INSRRP14616 1297 aa10.58□□□□□ -0.72
ATG3-203ENST00000465980 NASPP49321 788 aaPredicted RBP10.58□□□□□ -0.72
ATG3-203ENST00000465980 MRPS5P82675 430 aaKnown RBP10.58□□□□□ -0.72
ATG3-203ENST00000465980 TMEM62Q0P6H9 643 aa10.58□□□□□ -0.72
ATG3-203ENST00000465980 NR6A1Q15406 480 aa10.58□□□□□ -0.72
ATG3-203ENST00000465980 RILPL1Q5EBL4 403 aa10.58□□□□□ -0.72
ATG3-203ENST00000465980 RSPH3Q86UC2 560 aa10.58□□□□□ -0.72
ATG3-203ENST00000465980 PLA2G4DQ86XP0 818 aa10.58□□□□□ -0.72
ATG3-203ENST00000465980 TEX2Q8IWB9 1127 aa10.58□□□□□ -0.72
ATG3-203ENST00000465980 REXO1Q8N1G1 1221 aaKnown RBP10.58□□□□□ -0.72
ATG3-203ENST00000465980 LEO1Q8WVC0 666 aaPredicted RBP10.58□□□□□ -0.72
ATG3-203ENST00000465980 SPATA32Q96LK8 384 aa10.58□□□□□ -0.72
ATG3-203ENST00000465980 ASB2Q96Q27 587 aa10.58□□□□□ -0.72
ATG3-203ENST00000465980 TGS1Q96RS0 853 aaKnown RBP10.58□□□□□ -0.72
ATG3-203ENST00000465980 USP28Q96RU2 1077 aa10.58□□□□□ -0.72
ATG3-203ENST00000465980 YME1L1Q96TA2 773 aa10.58□□□□□ -0.72
ATG3-203ENST00000465980 KRTAP4-6Q9BYQ5 205 aa10.58□□□□□ -0.72
ATG3-203ENST00000465980 GDPD2Q9HCC8 539 aa10.58□□□□□ -0.72
ATG3-203ENST00000465980 INSL6Q9Y581 213 aa10.58□□□□□ -0.72
ATG3-203ENST00000465980 MYH15Q9Y2K3 1946 aa10.58□□□□□ -0.72
ATG3-203ENST00000465980 NFASCO94856 1347 aa10.58□□□□□ -0.72
ATG3-203ENST00000465980 TRIOO75962 3097 aa10.57□□□□□ -0.72
ATG3-203ENST00000465980 LOC101059915A0A1B0GWI6 518 aaPredicted RBP10.57□□□□□ -0.72
ATG3-203ENST00000465980 FAM86B1E9PN63 330 aa10.57□□□□□ -0.72
ATG3-203ENST00000465980 MEIS1O00470 390 aa10.57□□□□□ -0.72
ATG3-203ENST00000465980 BACH1O14867 736 aa10.57□□□□□ -0.72
ATG3-203ENST00000465980 MAFGO15525 162 aa10.57□□□□□ -0.72
ATG3-203ENST00000465980 LPXNO60711 386 aa10.57□□□□□ -0.72
ATG3-203ENST00000465980 YEATS4O95619 227 aa10.57□□□□□ -0.72
ATG3-203ENST00000465980 CCNE2O96020 404 aa10.57□□□□□ -0.72
ATG3-203ENST00000465980 FAM86B2P0C5J1 330 aa10.57□□□□□ -0.72
ATG3-203ENST00000465980 TRAPPC10P48553 1259 aa10.57□□□□□ -0.72
ATG3-203ENST00000465980 TOB1P50616 345 aaPredicted RBP10.57□□□□□ -0.72
ATG3-203ENST00000465980 STAT5BP51692 787 aa10.57□□□□□ -0.72
ATG3-203ENST00000465980 KCNQ1P51787 676 aa10.57□□□□□ -0.72
ATG3-203ENST00000465980 MRPS6P82932 125 aaKnown RBP10.57□□□□□ -0.72
ATG3-203ENST00000465980 LPIN1Q14693 890 aa10.57□□□□□ -0.72
ATG3-203ENST00000465980 PLCB4Q15147 1175 aa10.57□□□□□ -0.72
ATG3-203ENST00000465980 SKOR2Q2VWA4 1001 aaPredicted RBP10.57□□□□□ -0.72
ATG3-203ENST00000465980 EARS2Q5JPH6 523 aaKnown RBP10.57□□□□□ -0.72
ATG3-203ENST00000465980 FAM26DQ5JW98 314 aa10.57□□□□□ -0.72
ATG3-203ENST00000465980 MARCH8Q5T0T0 291 aa10.57□□□□□ -0.72
ATG3-203ENST00000465980 TAF2Q6P1X5 1199 aa10.57□□□□□ -0.72
ATG3-203ENST00000465980 KRT25Q7Z3Z0 450 aa10.57□□□□□ -0.72
ATG3-203ENST00000465980 ADAMTS19Q8TE59 1207 aa10.57□□□□□ -0.72
ATG3-203ENST00000465980 ATXN2LQ8WWM7 1075 aaKnown RBP10.57□□□□□ -0.72
ATG3-203ENST00000465980 OCSTAMPQ9BR26 566 aa10.57□□□□□ -0.72
ATG3-203ENST00000465980 C17orf80Q9BSJ5 609 aa10.57□□□□□ -0.72
ATG3-203ENST00000465980 NOL7Q9UMY1 257 aaKnown RBP10.57□□□□□ -0.72
ATG3-203ENST00000465980 CDY2AQ9Y6F7 541 aa10.57□□□□□ -0.72
ATG3-203ENST00000465980 FNDC1Q4ZHG4 1894 aaPredicted RBP10.57□□□□□ -0.72
ATG3-203ENST00000465980 CCDC194A0A1B0GVG4 234 aa10.56□□□□□ -0.72
ATG3-203ENST00000465980 MBLAC1A4D2B0 266 aaPredicted RBP10.56□□□□□ -0.72
ATG3-203ENST00000465980 RRN3P2A6NIE6 340 aa10.56□□□□□ -0.72
ATG3-203ENST00000465980 IBSPP21815 317 aaPredicted RBP10.56□□□□□ -0.72
ATG3-203ENST00000465980 ERVK-21P61565 698 aa10.56□□□□□ -0.72
ATG3-203ENST00000465980 HTRA4P83105 476 aaPredicted RBP10.56□□□□□ -0.72
ATG3-203ENST00000465980 MGAT3Q09327 533 aa10.56□□□□□ -0.72
ATG3-203ENST00000465980 FBXO47Q5MNV8 452 aa10.56□□□□□ -0.72
ATG3-203ENST00000465980 MCTP2Q6DN12 878 aa10.56□□□□□ -0.72
ATG3-203ENST00000465980 PIK3AP1Q6ZUJ8 805 aa10.56□□□□□ -0.72
ATG3-203ENST00000465980 TRMT1LQ7Z2T5 733 aaKnown RBP10.56□□□□□ -0.72
ATG3-203ENST00000465980 TMEM151AQ8N4L1 468 aa10.56□□□□□ -0.72
ATG3-203ENST00000465980 LINC00301Q8NCQ3 95 aa10.56□□□□□ -0.72
ATG3-203ENST00000465980 NECAB3Q96P71 396 aaPredicted RBP10.56□□□□□ -0.72
ATG3-203ENST00000465980 SUGCTQ9HAC7 445 aa10.56□□□□□ -0.72
ATG3-203ENST00000465980 TCEAL9Q9UHQ7 104 aa10.56□□□□□ -0.72
ATG3-203ENST00000465980 CLIC4Q9Y696 253 aa10.56□□□□□ -0.72
ATG3-203ENST00000465980 IGLV3-22A0A075B6J6 115 aa10.55□□□□□ -0.72
ATG3-203ENST00000465980 M0QZ92 97 aa10.55□□□□□ -0.72
ATG3-203ENST00000465980 IPO5O00410 1097 aaKnown RBP10.55□□□□□ -0.72
ATG3-203ENST00000465980 POU3F3P20264 500 aaPredicted RBP10.55□□□□□ -0.72
ATG3-203ENST00000465980 CD52P31358 61 aa10.55□□□□□ -0.72
ATG3-203ENST00000465980 CTSOP43234 321 aaPredicted RBP10.55□□□□□ -0.72
ATG3-203ENST00000465980 UBE2HP62256 183 aa10.55□□□□□ -0.72
ATG3-203ENST00000465980 CEBPZQ03701 1054 aaKnown RBP10.55□□□□□ -0.72
ATG3-203ENST00000465980 SLC39A14Q15043 492 aa10.55□□□□□ -0.72
ATG3-203ENST00000465980 STK38Q15208 465 aa10.55□□□□□ -0.72
ATG3-203ENST00000465980 NONOQ15233 471 aaKnown RBP eCLIP10.55□□□□□ -0.72
ATG3-203ENST00000465980 PTPAQ15257 358 aa10.55□□□□□ -0.72
ATG3-203ENST00000465980 SF3A1Q15459 793 aaKnown RBP10.55□□□□□ -0.72
ATG3-203ENST00000465980 PRR16Q569H4 304 aa10.55□□□□□ -0.72
ATG3-203ENST00000465980 FAM160B1Q5W0V3 765 aa10.55□□□□□ -0.72
ATG3-203ENST00000465980 ZNF385CQ66K41 422 aaPredicted RBP10.55□□□□□ -0.72
ATG3-203ENST00000465980 SV2AQ7L0J3 742 aa10.55□□□□□ -0.72
ATG3-203ENST00000465980 NIPA1Q7RTP0 329 aa10.55□□□□□ -0.72
ATG3-203ENST00000465980 CCDC60Q8IWA6 550 aaPredicted RBP10.55□□□□□ -0.72
ATG3-203ENST00000465980 ADAM32Q8TC27 787 aa10.55□□□□□ -0.72
ATG3-203ENST00000465980 KCNG4Q8TDN1 519 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms