RNA–Protein interactions for RNA: ENST00000465860.5

EXOSC3-204, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-204ENST00000465860 NOL9Q5SY16 702 aaKnown RBP5.79□□□□□ -1.48
EXOSC3-204ENST00000465860 METTL16Q86W50 562 aaKnown RBP5.79□□□□□ -1.48
EXOSC3-204ENST00000465860 ERO1BQ86YB8 467 aa5.79□□□□□ -1.48
EXOSC3-204ENST00000465860 SDR42E1Q8WUS8 393 aa5.79□□□□□ -1.48
EXOSC3-204ENST00000465860 FCRL2Q96LA5 508 aaPredicted RBP5.79□□□□□ -1.48
EXOSC3-204ENST00000465860 SEC62Q99442 399 aaKnown RBP5.79□□□□□ -1.48
EXOSC3-204ENST00000465860 PUS7LQ9H0K6 701 aaKnown RBP5.79□□□□□ -1.48
EXOSC3-204ENST00000465860 ARMT1Q9H993 441 aa5.79□□□□□ -1.48
EXOSC3-204ENST00000465860 CRTAC1Q9NQ79 661 aa5.79□□□□□ -1.48
EXOSC3-204ENST00000465860 SAGE1Q9NXZ1 904 aa5.79□□□□□ -1.48
EXOSC3-204ENST00000465860 FBXL21Q9UKT6 434 aa5.79□□□□□ -1.48
EXOSC3-204ENST00000465860 PCDHB12Q9Y5F1 795 aa5.79□□□□□ -1.48
EXOSC3-204ENST00000465860 FAM86C2PA6NEL3 165 aa5.78□□□□□ -1.48
EXOSC3-204ENST00000465860 MANSC4A6NHS7 340 aaPredicted RBP5.78□□□□□ -1.48
EXOSC3-204ENST00000465860 BTBD19C9JJ37 291 aa5.78□□□□□ -1.48
EXOSC3-204ENST00000465860 MBD4O95243 580 aa5.78□□□□□ -1.48
EXOSC3-204ENST00000465860 INHBBP09529 407 aa5.78□□□□□ -1.48
EXOSC3-204ENST00000465860 ACRP10323 421 aa5.78□□□□□ -1.48
EXOSC3-204ENST00000465860 PNLIPP16233 465 aa5.78□□□□□ -1.48
EXOSC3-204ENST00000465860 ZNF16P17020 682 aaPredicted RBP5.78□□□□□ -1.48
EXOSC3-204ENST00000465860 RTP1P59025 263 aa5.78□□□□□ -1.48
EXOSC3-204ENST00000465860 SRSF3P84103 164 aaKnown RBP5.78□□□□□ -1.48
EXOSC3-204ENST00000465860 MAP3K12Q12852 859 aa5.78□□□□□ -1.48
EXOSC3-204ENST00000465860 PPIL2Q13356 520 aa5.78□□□□□ -1.48
EXOSC3-204ENST00000465860 AUHQ13825 339 aaKnown RBP5.78□□□□□ -1.48
EXOSC3-204ENST00000465860 ANKRD45Q5TZF3 282 aa5.78□□□□□ -1.48
EXOSC3-204ENST00000465860 DCAF15Q66K64 600 aa5.78□□□□□ -1.48
EXOSC3-204ENST00000465860 LILRA6Q6PI73 481 aa5.78□□□□□ -1.48
EXOSC3-204ENST00000465860 SMC5Q8IY18 1101 aa5.78□□□□□ -1.48
EXOSC3-204ENST00000465860 OSBP2Q969R2 916 aa5.78□□□□□ -1.48
EXOSC3-204ENST00000465860 XPO5Q9HAV4 1204 aaKnown RBP eCLIP5.78□□□□□ -1.48
EXOSC3-204ENST00000465860 ECHDC1Q9NTX5 307 aa5.78□□□□□ -1.48
EXOSC3-204ENST00000465860 TNFRSF10DQ9UBN6 386 aa5.78□□□□□ -1.48
EXOSC3-204ENST00000465860 MBD1Q9UIS9 605 aaPredicted RBP5.78□□□□□ -1.48
EXOSC3-204ENST00000465860 CNOT6Q9ULM6 557 aaKnown RBP5.78□□□□□ -1.48
EXOSC3-204ENST00000465860 GPR55Q9Y2T6 319 aaPredicted RBP5.78□□□□□ -1.48
EXOSC3-204ENST00000465860 AFG3L2Q9Y4W6 797 aa5.78□□□□□ -1.48
EXOSC3-204ENST00000465860 ZHX2Q9Y6X8 837 aa5.78□□□□□ -1.48
EXOSC3-204ENST00000465860 PARP14Q460N5 1801 aa5.78□□□□□ -1.48
EXOSC3-204ENST00000465860 RLFQ13129 1914 aa5.78□□□□□ -1.48
EXOSC3-204ENST00000465860 GREB1LQ9C091 1923 aaPredicted RBP5.78□□□□□ -1.48
EXOSC3-204ENST00000465860 ADGRA2Q96PE1 1338 aa5.77□□□□□ -1.49
EXOSC3-204ENST00000465860 PLXNB2O15031 1838 aa5.77□□□□□ -1.49
EXOSC3-204ENST00000465860 C9IYK1 514 aa5.77□□□□□ -1.49
EXOSC3-204ENST00000465860 M0R2C6 588 aa5.77□□□□□ -1.49
EXOSC3-204ENST00000465860 FOXP2O15409 715 aa5.77□□□□□ -1.49
EXOSC3-204ENST00000465860 CA12O43570 354 aa5.77□□□□□ -1.49
EXOSC3-204ENST00000465860 CTNND1O60716 968 aaKnown RBP5.77□□□□□ -1.49
EXOSC3-204ENST00000465860 ZNF205O95201 554 aa5.77□□□□□ -1.49
EXOSC3-204ENST00000465860 BAG3O95817 575 aa5.77□□□□□ -1.49
EXOSC3-204ENST00000465860 MX1P20591 662 aa5.77□□□□□ -1.49
EXOSC3-204ENST00000465860 CTGFP29279 349 aa5.77□□□□□ -1.49
EXOSC3-204ENST00000465860 BMP8BP34820 402 aa5.77□□□□□ -1.49
EXOSC3-204ENST00000465860 SHMT1P34896 483 aa5.77□□□□□ -1.49
EXOSC3-204ENST00000465860 GTF2A2P52657 109 aa5.77□□□□□ -1.49
EXOSC3-204ENST00000465860 PDE1AP54750 535 aa5.77□□□□□ -1.49
EXOSC3-204ENST00000465860 PPATQ06203 517 aa5.77□□□□□ -1.49
EXOSC3-204ENST00000465860 SREBF2Q12772 1141 aa5.77□□□□□ -1.49
EXOSC3-204ENST00000465860 SSPNQ14714 243 aa5.77□□□□□ -1.49
EXOSC3-204ENST00000465860 TTF1Q15361 905 aaPredicted RBP5.77□□□□□ -1.49
EXOSC3-204ENST00000465860 HSF5Q4G112 596 aaPredicted RBP5.77□□□□□ -1.49
EXOSC3-204ENST00000465860 TREML2Q5T2D2 321 aa5.77□□□□□ -1.49
EXOSC3-204ENST00000465860 CRTC3Q6UUV7 619 aa5.77□□□□□ -1.49
EXOSC3-204ENST00000465860 SKAP1Q86WV1 359 aa5.77□□□□□ -1.49
EXOSC3-204ENST00000465860 SCYL3Q8IZE3 742 aa5.77□□□□□ -1.49
EXOSC3-204ENST00000465860 KBTBD3Q8NAB2 608 aa5.77□□□□□ -1.49
EXOSC3-204ENST00000465860 SLC44A5Q8NCS7 719 aa5.77□□□□□ -1.49
EXOSC3-204ENST00000465860 DYNLL2Q96FJ2 89 aa5.77□□□□□ -1.49
EXOSC3-204ENST00000465860 LNPKQ9C0E8 428 aa5.77□□□□□ -1.49
EXOSC3-204ENST00000465860 ARHGAP39Q9C0H5 1083 aa5.77□□□□□ -1.49
EXOSC3-204ENST00000465860 EPB41L4AQ9HCS5 686 aaPredicted RBP5.77□□□□□ -1.49
EXOSC3-204ENST00000465860 ERVK13-1Q9NX77 482 aa5.77□□□□□ -1.49
EXOSC3-204ENST00000465860 SUCOQ9UBS9 1254 aaKnown RBP5.77□□□□□ -1.49
EXOSC3-204ENST00000465860 KCTD3Q9Y597 815 aa5.77□□□□□ -1.49
EXOSC3-204ENST00000465860 MKI67P46013 3256 aaKnown RBP5.77□□□□□ -1.49
EXOSC3-204ENST00000465860 COL11A1P12107 1806 aaPredicted RBP5.76□□□□□ -1.49
EXOSC3-204ENST00000465860 MYH4Q9Y623 1939 aa5.76□□□□□ -1.49
EXOSC3-204ENST00000465860 A0A0G2JLL6 359 aaPredicted RBP5.76□□□□□ -1.49
EXOSC3-204ENST00000465860 TRIM75PA6NK02 468 aa5.76□□□□□ -1.49
EXOSC3-204ENST00000465860 GSG1L2A8MUP6 293 aa5.76□□□□□ -1.49
EXOSC3-204ENST00000465860 HRKO00198 91 aa5.76□□□□□ -1.49
EXOSC3-204ENST00000465860 SHOXO15266 292 aa5.76□□□□□ -1.49
EXOSC3-204ENST00000465860 RNF113AO15541 343 aaKnown RBP5.76□□□□□ -1.49
EXOSC3-204ENST00000465860 CYP2C8P10632 490 aa5.76□□□□□ -1.49
EXOSC3-204ENST00000465860 CETPP11597 493 aa5.76□□□□□ -1.49
EXOSC3-204ENST00000465860 VAV1P15498 845 aa5.76□□□□□ -1.49
EXOSC3-204ENST00000465860 VIPR1P32241 457 aa5.76□□□□□ -1.49
EXOSC3-204ENST00000465860 GUCY1A2P33402 732 aa5.76□□□□□ -1.49
EXOSC3-204ENST00000465860 ZNF76P36508 570 aa5.76□□□□□ -1.49
EXOSC3-204ENST00000465860 INHBEP58166 350 aa5.76□□□□□ -1.49
EXOSC3-204ENST00000465860 NUCB1Q02818 461 aa5.76□□□□□ -1.49
EXOSC3-204ENST00000465860 GABPAQ06546 454 aa5.76□□□□□ -1.49
EXOSC3-204ENST00000465860 SNAPC2Q13487 334 aa5.76□□□□□ -1.49
EXOSC3-204ENST00000465860 UBE3CQ15386 1083 aa5.76□□□□□ -1.49
EXOSC3-204ENST00000465860 TATDN1Q6P1N9 297 aa5.76□□□□□ -1.49
EXOSC3-204ENST00000465860 CCDC129Q6ZRS4 1044 aa5.76□□□□□ -1.49
EXOSC3-204ENST00000465860 PRRT2Q7Z6L0 340 aaPredicted RBP5.76□□□□□ -1.49
EXOSC3-204ENST00000465860 CD99L2Q8TCZ2 262 aa5.76□□□□□ -1.49
EXOSC3-204ENST00000465860 GCC1Q96CN9 775 aa5.76□□□□□ -1.49
EXOSC3-204ENST00000465860 HOOK2Q96ED9 719 aa5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms