RNA–Protein interactions for RNA: ENST00000465727.5

SDF4-205, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,095 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-205ENST00000465727 CCNB1P14635 433 aa21.27■□□□□ 0.99
SDF4-205ENST00000465727 ABCB4P21439 1286 aa21.27■□□□□ 0.99
SDF4-205ENST00000465727 FGFR4P22455 802 aa21.27■□□□□ 0.99
SDF4-205ENST00000465727 CCDC15Q0P6D6 951 aa21.27■□□□□ 0.99
SDF4-205ENST00000465727 ZNF211Q13398 564 aaPredicted RBP21.27■□□□□ 0.99
SDF4-205ENST00000465727 BLMHQ13867 455 aa21.27■□□□□ 0.99
SDF4-205ENST00000465727 MIS18BP1Q6P0N0 1132 aa21.27■□□□□ 0.99
SDF4-205ENST00000465727 GJB7Q6PEY0 223 aa21.27■□□□□ 0.99
SDF4-205ENST00000465727 BICDL1Q6ZP65 573 aa21.27■□□□□ 0.99
SDF4-205ENST00000465727 PRELID2Q8N945 189 aa21.27■□□□□ 0.99
SDF4-205ENST00000465727 SYT2Q8N9I0 419 aaPredicted RBP21.27■□□□□ 0.99
SDF4-205ENST00000465727 ZNF483Q8TF39 744 aaPredicted RBP21.27■□□□□ 0.99
SDF4-205ENST00000465727 RTFDC1Q9BY42 306 aaPredicted RBP21.27■□□□□ 0.99
SDF4-205ENST00000465727 FRMPD4Q14CM0 1322 aa21.26■□□□□ 0.99
SDF4-205ENST00000465727 MED24O75448 989 aa21.26■□□□□ 0.99
SDF4-205ENST00000465727 PLCG2P16885 1265 aa21.26■□□□□ 0.99
SDF4-205ENST00000465727 SLCO1A2P46721 670 aa21.26■□□□□ 0.99
SDF4-205ENST00000465727 NFIL3Q16649 462 aa21.26■□□□□ 0.99
SDF4-205ENST00000465727 CYP1B1Q16678 543 aa21.26■□□□□ 0.99
SDF4-205ENST00000465727 CCDC137Q6PK04 289 aaKnown RBP21.26■□□□□ 0.99
SDF4-205ENST00000465727 ERMNQ8TAM6 284 aa21.26■□□□□ 0.99
SDF4-205ENST00000465727 GJA10Q969M2 543 aa21.26■□□□□ 0.99
SDF4-205ENST00000465727 RAB3IPQ96QF0 476 aaPredicted RBP21.26■□□□□ 0.99
SDF4-205ENST00000465727 USP40Q9NVE5 1235 aa21.26■□□□□ 0.99
SDF4-205ENST00000465727 PRKAG3Q9UGI9 489 aa21.26■□□□□ 0.99
SDF4-205ENST00000465727 ZNF568Q3ZCX4 644 aa21.25■□□□□ 0.99
SDF4-205ENST00000465727 ANKRD20A2Q5SQ80 823 aa21.25■□□□□ 0.99
SDF4-205ENST00000465727 ANKRD20A1Q5TYW2 823 aa21.25■□□□□ 0.99
SDF4-205ENST00000465727 ANKRD20A3Q5VUR7 823 aa21.25■□□□□ 0.99
SDF4-205ENST00000465727 NUGGCQ68CJ6 796 aa21.25■□□□□ 0.99
SDF4-205ENST00000465727 MOXD1Q6UVY6 613 aa21.25■□□□□ 0.99
SDF4-205ENST00000465727 TEX9Q8N6V9 391 aa21.25■□□□□ 0.99
SDF4-205ENST00000465727 MORC4Q8TE76 937 aa21.25■□□□□ 0.99
SDF4-205ENST00000465727 BORCS6Q96GS4 357 aa21.25■□□□□ 0.99
SDF4-205ENST00000465727 NLRP3Q96P20 1036 aa21.25■□□□□ 0.99
SDF4-205ENST00000465727 REEP2Q9BRK0 252 aa21.25■□□□□ 0.99
SDF4-205ENST00000465727 DNM3Q9UQ16 869 aa21.25■□□□□ 0.99
SDF4-205ENST00000465727 ATF5Q9Y2D1 282 aaPredicted RBP21.25■□□□□ 0.99
SDF4-205ENST00000465727 SBF2Q86WG5 1849 aa21.25■□□□□ 0.99
SDF4-205ENST00000465727 PASKQ96RG2 1323 aa21.25■□□□□ 0.99
SDF4-205ENST00000465727 CYP3A7-CYP3A51PA0A087WV96 503 aa21.25■□□□□ 0.99
SDF4-205ENST00000465727 SKAP2O75563 359 aaPredicted RBP21.25■□□□□ 0.99
SDF4-205ENST00000465727 TNFAIP3P21580 790 aa21.25■□□□□ 0.99
SDF4-205ENST00000465727 CYP3A7P24462 503 aa21.25■□□□□ 0.99
SDF4-205ENST00000465727 PDE6BP35913 854 aa21.25■□□□□ 0.99
SDF4-205ENST00000465727 SF3A3Q12874 501 aaKnown RBP eCLIP21.25■□□□□ 0.995e-6■■■■■ 35.2
SDF4-205ENST00000465727 DRAP1Q14919 205 aaPredicted RBP21.25■□□□□ 0.99
SDF4-205ENST00000465727 SEL1L2Q5TEA6 688 aa21.25■□□□□ 0.99
SDF4-205ENST00000465727 RNF43Q68DV7 783 aa21.25■□□□□ 0.99
SDF4-205ENST00000465727 CKAP2Q8WWK9 683 aa21.25■□□□□ 0.99
SDF4-205ENST00000465727 ARHGEF2Q92974 986 aaKnown RBP21.25■□□□□ 0.99
SDF4-205ENST00000465727 GRAMD1AQ96CP6 724 aa21.25■□□□□ 0.99
SDF4-205ENST00000465727 ARHGEF26Q96DR7 871 aa21.25■□□□□ 0.99
SDF4-205ENST00000465727 RPS6KC1Q96S38 1066 aa21.25■□□□□ 0.99
SDF4-205ENST00000465727 MKNK1Q9BUB5 465 aa21.25■□□□□ 0.99
SDF4-205ENST00000465727 NYXQ9GZU5 481 aa21.25■□□□□ 0.99
SDF4-205ENST00000465727 THAP2Q9H0W7 228 aa21.25■□□□□ 0.99
SDF4-205ENST00000465727 JMJD4Q9H9V9 463 aa21.25■□□□□ 0.99
SDF4-205ENST00000465727 MTMR4Q9NYA4 1195 aa21.25■□□□□ 0.99
SDF4-205ENST00000465727 ALG6Q9Y672 507 aa21.25■□□□□ 0.99
SDF4-205ENST00000465727 SPATA31A1Q5TZJ5 1347 aa21.24■□□□□ 0.99
SDF4-205ENST00000465727 TMEM120BA0PK00 339 aa21.24■□□□□ 0.99
SDF4-205ENST00000465727 POTEFA5A3E0 1075 aa21.24■□□□□ 0.99
SDF4-205ENST00000465727 POTEIP0CG38 1075 aa21.24■□□□□ 0.99
SDF4-205ENST00000465727 RFX1P22670 979 aa21.24■□□□□ 0.99
SDF4-205ENST00000465727 CASP4P49662 377 aa21.24■□□□□ 0.99
SDF4-205ENST00000465727 POTEGQ6S5H5 508 aa21.24■□□□□ 0.99
SDF4-205ENST00000465727 POTEEQ6S8J3 1075 aa21.24■□□□□ 0.99
SDF4-205ENST00000465727 ERICH1Q86X53 443 aa21.24■□□□□ 0.99
SDF4-205ENST00000465727 MBOAT7Q96N66 472 aa21.24■□□□□ 0.99
SDF4-205ENST00000465727 ZSWIM1Q9BR11 485 aa21.24■□□□□ 0.99
SDF4-205ENST00000465727 PSTPIP2Q9H939 334 aa21.24■□□□□ 0.99
SDF4-205ENST00000465727 ADAM22Q9P0K1 906 aa21.24■□□□□ 0.99
SDF4-205ENST00000465727 DBR1Q9UK59 544 aaKnown RBP21.24■□□□□ 0.99
SDF4-205ENST00000465727 DNAJC12Q9UKB3 198 aa21.24■□□□□ 0.99
SDF4-205ENST00000465727 MTUS1Q9ULD2 1270 aa21.24■□□□□ 0.99
SDF4-205ENST00000465727 COL5A3P25940 1745 aaPredicted RBP21.24■□□□□ 0.99
SDF4-205ENST00000465727 E7ENQ6 273 aa21.24■□□□□ 0.99
SDF4-205ENST00000465727 TTLL1O95922 423 aa21.24■□□□□ 0.99
SDF4-205ENST00000465727 PSMC2P35998 433 aaKnown RBP21.24■□□□□ 0.99
SDF4-205ENST00000465727 ACVR2BQ13705 512 aa21.24■□□□□ 0.99
SDF4-205ENST00000465727 MICAL1Q8TDZ2 1067 aa21.24■□□□□ 0.99
SDF4-205ENST00000465727 PRCCQ92733 491 aaPredicted RBP21.24■□□□□ 0.99
SDF4-205ENST00000465727 TMOD4Q9NZQ9 345 aa21.24■□□□□ 0.99
SDF4-205ENST00000465727 COG5Q9UP83 839 aa21.24■□□□□ 0.99
SDF4-205ENST00000465727 POTEJP0CG39 1038 aa21.23■□□□□ 0.99
SDF4-205ENST00000465727 RPA1P27694 616 aa21.23■□□□□ 0.99
SDF4-205ENST00000465727 RFC4P35249 363 aa21.23■□□□□ 0.99
SDF4-205ENST00000465727 BTDP43251 543 aa21.23■□□□□ 0.99
SDF4-205ENST00000465727 ZNF543Q08ER8 600 aa21.23■□□□□ 0.99
SDF4-205ENST00000465727 CALCOCO2Q13137 446 aa21.23■□□□□ 0.99
SDF4-205ENST00000465727 TTC27Q6P3X3 843 aa21.23■□□□□ 0.99
SDF4-205ENST00000465727 CATSPER3Q86XQ3 398 aa21.23■□□□□ 0.99
SDF4-205ENST00000465727 ADGRF4Q8IZF3 695 aa21.23■□□□□ 0.99
SDF4-205ENST00000465727 FITM2Q8N6M3 262 aa21.23■□□□□ 0.99
SDF4-205ENST00000465727 SH3GL3Q99963 347 aa21.23■□□□□ 0.99
SDF4-205ENST00000465727 OLFML3Q9NRN5 406 aa21.23■□□□□ 0.99
SDF4-205ENST00000465727 KLHL14Q9P2G3 628 aa21.23■□□□□ 0.99
SDF4-205ENST00000465727 MYO3BQ8WXR4 1341 aa21.23■□□□□ 0.99
SDF4-205ENST00000465727 COL14A1Q05707 1796 aaKnown RBP21.23■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms