RNA–Protein interactions for RNA: ENST00000465282.5

USP39-211, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-211ENST00000465282 AXLP30530 894 aa18.72■□□□□ 0.59
USP39-211ENST00000465282 ABCD1P33897 745 aa18.72■□□□□ 0.59
USP39-211ENST00000465282 ZNF131P52739 623 aa18.72■□□□□ 0.59
USP39-211ENST00000465282 GIT2Q14161 759 aa18.72■□□□□ 0.59
USP39-211ENST00000465282 TCTN1Q2MV58 587 aa18.72■□□□□ 0.59
USP39-211ENST00000465282 CNNM4Q6P4Q7 775 aa18.72■□□□□ 0.59
USP39-211ENST00000465282 CLEC17AQ6ZS10 378 aa18.72■□□□□ 0.59
USP39-211ENST00000465282 CATSPER4Q7RTX7 472 aa18.72■□□□□ 0.59
USP39-211ENST00000465282 CEP57L1Q8IYX8 460 aa18.72■□□□□ 0.59
USP39-211ENST00000465282 SLC17A8Q8NDX2 589 aa18.72■□□□□ 0.59
USP39-211ENST00000465282 KCNN1Q92952 543 aa18.72■□□□□ 0.59
USP39-211ENST00000465282 PRIMPOLQ96LW4 560 aa18.72■□□□□ 0.59
USP39-211ENST00000465282 REEP2Q9BRK0 252 aa18.72■□□□□ 0.59
USP39-211ENST00000465282 PARVGQ9HBI0 331 aa18.72■□□□□ 0.59
USP39-211ENST00000465282 RGS18Q9NS28 235 aa18.72■□□□□ 0.59
USP39-211ENST00000465282 CXXC1Q9P0U4 656 aaPredicted RBP18.72■□□□□ 0.59
USP39-211ENST00000465282 TRIOBPQ9H2D6 2365 aa18.72■□□□□ 0.59
USP39-211ENST00000465282 PTPRSQ13332 1948 aa18.72■□□□□ 0.59
USP39-211ENST00000465282 DENND3A2RUS2 1198 aa18.71■□□□□ 0.59
USP39-211ENST00000465282 INO80B-WBP1J3KQ70 363 aa18.71■□□□□ 0.59
USP39-211ENST00000465282 TBCAO75347 108 aaKnown RBP18.71■□□□□ 0.59
USP39-211ENST00000465282 ERLIN2O94905 339 aa18.71■□□□□ 0.59
USP39-211ENST00000465282 FAM13AO94988 1023 aa18.71■□□□□ 0.59
USP39-211ENST00000465282 SLFN14P0C7P3 912 aa18.71■□□□□ 0.59
USP39-211ENST00000465282 SYKP43405 635 aa18.71■□□□□ 0.59
USP39-211ENST00000465282 NPTX2P47972 431 aa18.71■□□□□ 0.59
USP39-211ENST00000465282 PEX3P56589 373 aa18.71■□□□□ 0.59
USP39-211ENST00000465282 MBTD1Q05BQ5 628 aa18.71■□□□□ 0.59
USP39-211ENST00000465282 DSC3Q14574 896 aa18.71■□□□□ 0.59
USP39-211ENST00000465282 FAM187BQ17R55 369 aa18.71■□□□□ 0.59
USP39-211ENST00000465282 FSIP1Q8NA03 581 aa18.71■□□□□ 0.59
USP39-211ENST00000465282 TMEM87AQ8NBN3 555 aa18.71■□□□□ 0.59
USP39-211ENST00000465282 BSNDQ8WZ55 320 aa18.71■□□□□ 0.59
USP39-211ENST00000465282 DDX12PQ92771 950 aa18.71■□□□□ 0.59
USP39-211ENST00000465282 TRAIPQ9BWF2 469 aa18.71■□□□□ 0.59
USP39-211ENST00000465282 TMX1Q9H3N1 280 aa18.71■□□□□ 0.59
USP39-211ENST00000465282 TMEM134Q9H6X4 195 aa18.71■□□□□ 0.59
USP39-211ENST00000465282 MINDY3Q9H8M7 445 aa18.71■□□□□ 0.59
USP39-211ENST00000465282 AGPAT5Q9NUQ2 364 aa18.71■□□□□ 0.59
USP39-211ENST00000465282 PRMT7Q9NVM4 692 aaPredicted RBP18.71■□□□□ 0.59
USP39-211ENST00000465282 MYMKA6NI61 221 aa18.7■□□□□ 0.58
USP39-211ENST00000465282 CCDC169A6NNP5 214 aa18.7■□□□□ 0.58
USP39-211ENST00000465282 SKIP12755 728 aa18.7■□□□□ 0.58
USP39-211ENST00000465282 ATP2A2P16615 1042 aaKnown RBP18.7■□□□□ 0.58
USP39-211ENST00000465282 GAP43P17677 238 aa18.7■□□□□ 0.58
USP39-211ENST00000465282 RAD51AP2Q09MP3 1159 aa18.7■□□□□ 0.58
USP39-211ENST00000465282 MAPK6Q16659 721 aa18.7■□□□□ 0.58
USP39-211ENST00000465282 PPP4R3CPQ6ZMV5 832 aa18.7■□□□□ 0.58
USP39-211ENST00000465282 SLC24A5Q71RS6 500 aa18.7■□□□□ 0.58
USP39-211ENST00000465282 CCDC51Q96ER9 411 aa18.7■□□□□ 0.58
USP39-211ENST00000465282 CCDC34Q96HJ3 373 aa18.7■□□□□ 0.58
USP39-211ENST00000465282 ADAM2Q99965 735 aa18.7■□□□□ 0.58
USP39-211ENST00000465282 FZD8Q9H461 694 aa18.7■□□□□ 0.58
USP39-211ENST00000465282 KMT5AQ9NQR1 393 aa18.7■□□□□ 0.58
USP39-211ENST00000465282 SEL1LQ9UBV2 794 aa18.7■□□□□ 0.58
USP39-211ENST00000465282 NPHP3-ACAD11A0A0J9YXS1 232 aa18.69■□□□□ 0.58
USP39-211ENST00000465282 LOC101059915A0A1B0GWI6 518 aaPredicted RBP18.69■□□□□ 0.58
USP39-211ENST00000465282 SFI1A8K8P3 1242 aa18.69■□□□□ 0.58
USP39-211ENST00000465282 K7ERI5 159 aa18.69■□□□□ 0.58
USP39-211ENST00000465282 CSDE1O75534 798 aaKnown RBP18.69■□□□□ 0.58
USP39-211ENST00000465282 MYL1P05976 194 aa18.69■□□□□ 0.58
USP39-211ENST00000465282 NDUFA8P51970 172 aa18.69■□□□□ 0.58
USP39-211ENST00000465282 SMAD3P84022 425 aaKnown RBP18.69■□□□□ 0.58
USP39-211ENST00000465282 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.69■□□□□ 0.58
USP39-211ENST00000465282 RTN4RL1Q86UN2 441 aaPredicted RBP18.69■□□□□ 0.58
USP39-211ENST00000465282 TOP1MTQ969P6 601 aa18.69■□□□□ 0.58
USP39-211ENST00000465282 DNAJC19Q96DA6 116 aa18.69■□□□□ 0.58
USP39-211ENST00000465282 C7orf25Q9BPX7 421 aa18.69■□□□□ 0.58
USP39-211ENST00000465282 POLD4Q9HCU8 107 aa18.69■□□□□ 0.58
USP39-211ENST00000465282 ARHGAP28Q9P2N2 729 aa18.69■□□□□ 0.58
USP39-211ENST00000465282 GBF1Q92538 1859 aa18.69■□□□□ 0.58
USP39-211ENST00000465282 ACKR2O00590 384 aa18.68■□□□□ 0.58
USP39-211ENST00000465282 STAG3L1P0CL83 205 aa18.68■□□□□ 0.58
USP39-211ENST00000465282 MAPTP10636 758 aaKnown RBP18.68■□□□□ 0.58
USP39-211ENST00000465282 FGFR4P22455 802 aa18.68■□□□□ 0.58
USP39-211ENST00000465282 SARSP49591 514 aaKnown RBP18.68■□□□□ 0.58
USP39-211ENST00000465282 FAM189BP81408 668 aa18.68■□□□□ 0.58
USP39-211ENST00000465282 AMHR2Q16671 573 aa18.68■□□□□ 0.58
USP39-211ENST00000465282 KANK3Q6NY19 840 aa18.68■□□□□ 0.58
USP39-211ENST00000465282 NOTUMQ6P988 496 aa18.68■□□□□ 0.58
USP39-211ENST00000465282 DYMQ7RTS9 669 aa18.68■□□□□ 0.58
USP39-211ENST00000465282 HERC6Q8IVU3 1022 aa18.68■□□□□ 0.58
USP39-211ENST00000465282 CCDC65Q8IXS2 484 aa18.68■□□□□ 0.58
USP39-211ENST00000465282 MYCT1Q8N699 235 aa18.68■□□□□ 0.58
USP39-211ENST00000465282 TRIM9Q9C026 710 aa18.68■□□□□ 0.58
USP39-211ENST00000465282 CCDC113Q9H0I3 377 aa18.68■□□□□ 0.58
USP39-211ENST00000465282 ELAC1Q9H777 363 aaKnown RBP18.68■□□□□ 0.58
USP39-211ENST00000465282 PIN4Q9Y237 131 aaKnown RBP18.68■□□□□ 0.58
USP39-211ENST00000465282 LAMA3Q16787 3333 aa18.68■□□□□ 0.58
USP39-211ENST00000465282 A0A0U1RQF3 1178 aa18.67■□□□□ 0.58
USP39-211ENST00000465282 FRMD3A2A2Y4 597 aa18.67■□□□□ 0.58
USP39-211ENST00000465282 C9IYK1 514 aa18.67■□□□□ 0.58
USP39-211ENST00000465282 ACTN4O43707 911 aaKnown RBP18.67■□□□□ 0.58
USP39-211ENST00000465282 TRAK2O60296 914 aa18.67■□□□□ 0.58
USP39-211ENST00000465282 MGEA5O60502 916 aa18.67■□□□□ 0.58
USP39-211ENST00000465282 TSPAN1O60635 241 aa18.67■□□□□ 0.58
USP39-211ENST00000465282 GJB5O95377 273 aa18.67■□□□□ 0.58
USP39-211ENST00000465282 EOMESO95936 686 aa18.67■□□□□ 0.58
USP39-211ENST00000465282 HOXA11P31270 313 aaPredicted RBP18.67■□□□□ 0.58
USP39-211ENST00000465282 RAB27AP51159 221 aa18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms