RNA–Protein interactions for RNA: ENST00000465209.1

COL11A1-207, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 2

Gene COL11A1, Length 297 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-207ENST00000465209 IFT122Q9HBG6 1241 aa12.31□□□□□ -0.44
COL11A1-207ENST00000465209 TSHZ2Q9NRE2 1034 aa12.31□□□□□ -0.44
COL11A1-207ENST00000465209 FAM105AQ9NUU6 356 aa12.31□□□□□ -0.44
COL11A1-207ENST00000465209 DNAJB4Q9UDY4 337 aa12.31□□□□□ -0.44
COL11A1-207ENST00000465209 SEPT9Q9UHD8 586 aaPredicted RBP12.31□□□□□ -0.44
COL11A1-207ENST00000465209 FAM186AA6NE01 2351 aa12.31□□□□□ -0.44
COL11A1-207ENST00000465209 SPTBN4Q9H254 2564 aa12.31□□□□□ -0.44
COL11A1-207ENST00000465209 RIF1Q5UIP0 2472 aaKnown RBP12.31□□□□□ -0.44
COL11A1-207ENST00000465209 GALR2O43603 387 aaPredicted RBP12.3□□□□□ -0.44
COL11A1-207ENST00000465209 GFRA3O60609 400 aa12.3□□□□□ -0.44
COL11A1-207ENST00000465209 OFD1O75665 1012 aa12.3□□□□□ -0.44
COL11A1-207ENST00000465209 CXCL14O95715 111 aa12.3□□□□□ -0.44
COL11A1-207ENST00000465209 ASGR2P07307 311 aa12.3□□□□□ -0.44
COL11A1-207ENST00000465209 MTHFRP42898 656 aa12.3□□□□□ -0.44
COL11A1-207ENST00000465209 ALDH7A1P49419 539 aaKnown RBP12.3□□□□□ -0.44
COL11A1-207ENST00000465209 AFF1P51825 1210 aaKnown RBP12.3□□□□□ -0.44
COL11A1-207ENST00000465209 FGD1P98174 961 aa12.3□□□□□ -0.44
COL11A1-207ENST00000465209 PTPN14Q15678 1187 aa12.3□□□□□ -0.44
COL11A1-207ENST00000465209 RARS2Q5T160 578 aaKnown RBP12.3□□□□□ -0.44
COL11A1-207ENST00000465209 CES5AQ6NT32 575 aa12.3□□□□□ -0.44
COL11A1-207ENST00000465209 MOXD1Q6UVY6 613 aa12.3□□□□□ -0.44
COL11A1-207ENST00000465209 MIER3Q7Z3K6 550 aa12.3□□□□□ -0.44
COL11A1-207ENST00000465209 KSR1Q8IVT5 923 aa12.3□□□□□ -0.44
COL11A1-207ENST00000465209 DAGLBQ8NCG7 672 aa12.3□□□□□ -0.44
COL11A1-207ENST00000465209 SCLT1Q96NL6 688 aa12.3□□□□□ -0.44
COL11A1-207ENST00000465209 AGPAT5Q9NUQ2 364 aa12.3□□□□□ -0.44
COL11A1-207ENST00000465209 DZANK1Q9NVP4 752 aa12.3□□□□□ -0.44
COL11A1-207ENST00000465209 PCDHA4Q9UN74 947 aa12.3□□□□□ -0.44
COL11A1-207ENST00000465209 USTQ9Y2C2 406 aa12.3□□□□□ -0.44
COL11A1-207ENST00000465209 FRYLO94915 3013 aa12.3□□□□□ -0.44
COL11A1-207ENST00000465209 TDRD15B5MCY1 1934 aaKnown RBP12.29□□□□□ -0.44
COL11A1-207ENST00000465209 MTCL1Q9Y4B5 1905 aaKnown RBP12.29□□□□□ -0.44
COL11A1-207ENST00000465209 H0Y858 1186 aa12.29□□□□□ -0.44
COL11A1-207ENST00000465209 EML1O00423 815 aa12.29□□□□□ -0.44
COL11A1-207ENST00000465209 SLC37A4O43826 429 aa12.29□□□□□ -0.44
COL11A1-207ENST00000465209 LILRB3O75022 631 aa12.29□□□□□ -0.44
COL11A1-207ENST00000465209 EFEMP2O95967 443 aa12.29□□□□□ -0.44
COL11A1-207ENST00000465209 SFPQP23246 707 aaKnown RBP eCLIP12.29□□□□□ -0.44
COL11A1-207ENST00000465209 SLC11A1P49279 550 aa12.29□□□□□ -0.44
COL11A1-207ENST00000465209 CCT2P78371 535 aaKnown RBP12.29□□□□□ -0.44
COL11A1-207ENST00000465209 CDC42EP1Q00587 391 aa12.29□□□□□ -0.44
COL11A1-207ENST00000465209 LONRF3Q496Y0 759 aa12.29□□□□□ -0.44
COL11A1-207ENST00000465209 NOMO2Q5JPE7 1267 aa12.29□□□□□ -0.44
COL11A1-207ENST00000465209 PLA2G4FQ68DD2 849 aa12.29□□□□□ -0.44
COL11A1-207ENST00000465209 CWF19L1Q69YN2 538 aaKnown RBP12.29□□□□□ -0.44
COL11A1-207ENST00000465209 TWF2Q6IBS0 349 aaKnown RBP12.29□□□□□ -0.44
COL11A1-207ENST00000465209 AGMOQ6ZNB7 445 aa12.29□□□□□ -0.44
COL11A1-207ENST00000465209 ZBTB33Q86T24 672 aa12.29□□□□□ -0.44
COL11A1-207ENST00000465209 ZNF280BQ86YH2 543 aa12.29□□□□□ -0.44
COL11A1-207ENST00000465209 SNX27Q96L92 541 aa12.29□□□□□ -0.44
COL11A1-207ENST00000465209 AIFM3Q96NN9 605 aa12.29□□□□□ -0.44
COL11A1-207ENST00000465209 MINDY3Q9H8M7 445 aa12.29□□□□□ -0.44
COL11A1-207ENST00000465209 SUCLA2Q9P2R7 463 aaPredicted RBP12.29□□□□□ -0.44
COL11A1-207ENST00000465209 WRAP73Q9P2S5 460 aaPredicted RBP12.29□□□□□ -0.44
COL11A1-207ENST00000465209 VAV3Q9UKW4 847 aa12.29□□□□□ -0.44
COL11A1-207ENST00000465209 PIN4Q9Y237 131 aaKnown RBP12.29□□□□□ -0.44
COL11A1-207ENST00000465209 WDR87Q6ZQQ6 2873 aa12.29□□□□□ -0.44
COL11A1-207ENST00000465209 PTPRZ1P23471 2315 aaPredicted RBP12.28□□□□□ -0.44
COL11A1-207ENST00000465209 CARNS1A5YM72 827 aa12.28□□□□□ -0.44
COL11A1-207ENST00000465209 DDHD2O94830 711 aa12.28□□□□□ -0.44
COL11A1-207ENST00000465209 SKIP12755 728 aa12.28□□□□□ -0.44
COL11A1-207ENST00000465209 HOXA11P31270 313 aaPredicted RBP12.28□□□□□ -0.44
COL11A1-207ENST00000465209 RAB27AP51159 221 aa12.28□□□□□ -0.44
COL11A1-207ENST00000465209 CLCN4P51793 760 aa12.28□□□□□ -0.44
COL11A1-207ENST00000465209 NLRP5P59047 1200 aa12.28□□□□□ -0.44
COL11A1-207ENST00000465209 AKAP17AQ02040 695 aaKnown RBP12.28□□□□□ -0.44
COL11A1-207ENST00000465209 PPP2R5CQ13362 524 aa12.28□□□□□ -0.44
COL11A1-207ENST00000465209 GIT2Q14161 759 aa12.28□□□□□ -0.44
COL11A1-207ENST00000465209 UBXN11Q5T124 520 aa12.28□□□□□ -0.44
COL11A1-207ENST00000465209 ASCL5Q7RTU5 278 aa12.28□□□□□ -0.44
COL11A1-207ENST00000465209 MRPL10Q7Z7H8 261 aaKnown RBP12.28□□□□□ -0.44
COL11A1-207ENST00000465209 RHPN2Q8IUC4 686 aa12.28□□□□□ -0.44
COL11A1-207ENST00000465209 RNF168Q8IYW5 571 aaPredicted RBP12.28□□□□□ -0.44
COL11A1-207ENST00000465209 ZNF579Q8NAF0 562 aaKnown RBP12.28□□□□□ -0.44
COL11A1-207ENST00000465209 TDRD5Q8NAT2 981 aaKnown RBP12.28□□□□□ -0.44
COL11A1-207ENST00000465209 ATOH1Q92858 354 aaPredicted RBP12.28□□□□□ -0.44
COL11A1-207ENST00000465209 C22orf23Q9BZE7 217 aa12.28□□□□□ -0.44
COL11A1-207ENST00000465209 IRF2BPLQ9H1B7 796 aa12.28□□□□□ -0.44
COL11A1-207ENST00000465209 KCNMB3Q9NPA1 279 aa12.28□□□□□ -0.44
COL11A1-207ENST00000465209 GVINP1Q7Z2Y8 2422 aa12.28□□□□□ -0.44
COL11A1-207ENST00000465209 NBL1P41271 181 aa12.27□□□□□ -0.45
COL11A1-207ENST00000465209 NPEPPSP55786 919 aa12.27□□□□□ -0.45
COL11A1-207ENST00000465209 PSMC5P62195 406 aa12.27□□□□□ -0.45
COL11A1-207ENST00000465209 GLB1LQ6UWU2 654 aa12.27□□□□□ -0.45
COL11A1-207ENST00000465209 GPR149Q86SP6 731 aa12.27□□□□□ -0.45
COL11A1-207ENST00000465209 BLIDQ8IZY5 108 aa12.27□□□□□ -0.45
COL11A1-207ENST00000465209 FAM177A1Q8N128 213 aaPredicted RBP12.27□□□□□ -0.45
COL11A1-207ENST00000465209 NLRP4Q96MN2 994 aa12.27□□□□□ -0.45
COL11A1-207ENST00000465209 INO80BQ9C086 356 aaPredicted RBP12.27□□□□□ -0.45
COL11A1-207ENST00000465209 DHX33Q9H6R0 707 aaKnown RBP12.27□□□□□ -0.45
COL11A1-207ENST00000465209 SFXN1Q9H9B4 322 aa12.27□□□□□ -0.45
COL11A1-207ENST00000465209 ZSWIM6Q9HCJ5 1215 aa12.27□□□□□ -0.45
COL11A1-207ENST00000465209 CYP26B1Q9NR63 512 aa12.27□□□□□ -0.45
COL11A1-207ENST00000465209 MARCH5Q9NX47 278 aa12.27□□□□□ -0.45
COL11A1-207ENST00000465209 LIMD1Q9UGP4 676 aa12.27□□□□□ -0.45
COL11A1-207ENST00000465209 INPP5FQ9Y2H2 1132 aa12.27□□□□□ -0.45
COL11A1-207ENST00000465209 PCDHB2Q9Y5E7 798 aa12.27□□□□□ -0.45
COL11A1-207ENST00000465209 PRR23AA6NEV1 266 aa12.26□□□□□ -0.45
COL11A1-207ENST00000465209 INPPL1O15357 1258 aa12.26□□□□□ -0.45
COL11A1-207ENST00000465209 N4BP1O75113 896 aaKnown RBP12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms