RNA–Protein interactions for RNA: ENST00000464187.1

COL5A1-205, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 2

Gene COL5A1, Length 1,830 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-205ENST00000464187 DGAT1O75907 488 aa15.89■□□□□ 0.13
COL5A1-205ENST00000464187 GCNT3O95395 438 aa15.89■□□□□ 0.13
COL5A1-205ENST00000464187 IGHA2P01877 340 aa15.89■□□□□ 0.13
COL5A1-205ENST00000464187 ZNF865P0CJ78 1059 aaPredicted RBP15.89■□□□□ 0.13
COL5A1-205ENST00000464187 MYBP10242 640 aa15.89■□□□□ 0.13
COL5A1-205ENST00000464187 XRCC5P13010 732 aaKnown RBP15.89■□□□□ 0.13
COL5A1-205ENST00000464187 MARK3P27448 753 aa15.89■□□□□ 0.13
COL5A1-205ENST00000464187 AMPD2Q01433 879 aa15.89■□□□□ 0.13
COL5A1-205ENST00000464187 TNFAIP2Q03169 654 aa15.89■□□□□ 0.13
COL5A1-205ENST00000464187 EDRF1Q3B7T1 1238 aa15.89■□□□□ 0.13
COL5A1-205ENST00000464187 CCDC122Q5T0U0 273 aa15.89■□□□□ 0.13
COL5A1-205ENST00000464187 FAM102BQ5T8I3 360 aa15.89■□□□□ 0.13
COL5A1-205ENST00000464187 FAM178BQ8IXR5 827 aa15.89■□□□□ 0.13
COL5A1-205ENST00000464187 GPR161Q8N6U8 529 aaKnown RBP15.89■□□□□ 0.13
COL5A1-205ENST00000464187 CEP112Q8N8E3 955 aa15.89■□□□□ 0.13
COL5A1-205ENST00000464187 AFG1LQ8WV93 481 aa15.89■□□□□ 0.13
COL5A1-205ENST00000464187 DRC1Q96MC2 740 aa15.89■□□□□ 0.13
COL5A1-205ENST00000464187 NIFKQ9BYG3 293 aaKnown RBP15.89■□□□□ 0.13
COL5A1-205ENST00000464187 GPRC5CQ9NQ84 441 aa15.89■□□□□ 0.13
COL5A1-205ENST00000464187 NRBP2Q9NSY0 501 aa15.89■□□□□ 0.13
COL5A1-205ENST00000464187 ARHGAP20Q9P2F6 1191 aa15.89■□□□□ 0.13
COL5A1-205ENST00000464187 GABRQQ9UN88 632 aa15.89■□□□□ 0.13
COL5A1-205ENST00000464187 MYH10P35580 1976 aa15.88■□□□□ 0.13
COL5A1-205ENST00000464187 LRRC53A6NM62 1247 aa15.88■□□□□ 0.13
COL5A1-205ENST00000464187 ZNF263O14978 683 aa15.88■□□□□ 0.13
COL5A1-205ENST00000464187 TFRCP02786 760 aaKnown RBP15.88■□□□□ 0.13
COL5A1-205ENST00000464187 NMT1P30419 496 aaKnown RBP15.88■□□□□ 0.13
COL5A1-205ENST00000464187 HOXD13P35453 343 aa15.88■□□□□ 0.13
COL5A1-205ENST00000464187 FLT3LGP49771 235 aa15.88■□□□□ 0.13
COL5A1-205ENST00000464187 CHMP4BP1P59074 171 aa15.88■□□□□ 0.13
COL5A1-205ENST00000464187 CAP1Q01518 475 aa15.88■□□□□ 0.13
COL5A1-205ENST00000464187 KIF22Q14807 665 aa15.88■□□□□ 0.13
COL5A1-205ENST00000464187 NEK11Q8NG66 645 aa15.88■□□□□ 0.13
COL5A1-205ENST00000464187 RABGGTAQ92696 567 aa15.88■□□□□ 0.13
COL5A1-205ENST00000464187 SMARCAD1Q9H4L7 1026 aa15.88■□□□□ 0.13
COL5A1-205ENST00000464187 PLS3P13797 630 aa15.87■□□□□ 0.13
COL5A1-205ENST00000464187 ZSCAN20P17040 1043 aaPredicted RBP15.87■□□□□ 0.13
COL5A1-205ENST00000464187 SLC26A2P50443 739 aa15.87■□□□□ 0.13
COL5A1-205ENST00000464187 PRKCZQ05513 592 aa15.87■□□□□ 0.13
COL5A1-205ENST00000464187 GLIPR1L2Q4G1C9 344 aa15.87■□□□□ 0.13
COL5A1-205ENST00000464187 PDXDC1Q6P996 788 aa15.87■□□□□ 0.13
COL5A1-205ENST00000464187 RRAGAQ7L523 313 aa15.87■□□□□ 0.13
COL5A1-205ENST00000464187 ZNF720Q7Z2F6 126 aa15.87■□□□□ 0.13
COL5A1-205ENST00000464187 BBXQ8WY36 941 aaPredicted RBP15.87■□□□□ 0.13
COL5A1-205ENST00000464187 FAM167AQ96KS9 214 aa15.87■□□□□ 0.13
COL5A1-205ENST00000464187 EDEM3Q9BZQ6 932 aa15.87■□□□□ 0.13
COL5A1-205ENST00000464187 LACRTQ9GZZ8 138 aa15.87■□□□□ 0.13
COL5A1-205ENST00000464187 ATP6V0A4Q9HBG4 840 aa15.87■□□□□ 0.13
COL5A1-205ENST00000464187 PDLIM7Q9NR12 457 aa15.87■□□□□ 0.13
COL5A1-205ENST00000464187 ARGLU1Q9NWB6 273 aaPredicted RBP15.87■□□□□ 0.13
COL5A1-205ENST00000464187 FAM53CQ9NYF3 392 aa15.87■□□□□ 0.13
COL5A1-205ENST00000464187 PUF60Q9UHX1 559 aaKnown RBP15.87■□□□□ 0.13
COL5A1-205ENST00000464187 KRT86O43790 486 aa15.87■□□□□ 0.13
COL5A1-205ENST00000464187 NOL4O94818 638 aa15.87■□□□□ 0.13
COL5A1-205ENST00000464187 PRPF6O94906 941 aaKnown RBP15.87■□□□□ 0.13
COL5A1-205ENST00000464187 IPO7O95373 1038 aaKnown RBP15.87■□□□□ 0.13
COL5A1-205ENST00000464187 VAV2P52735 878 aa15.87■□□□□ 0.13
COL5A1-205ENST00000464187 POLGP54098 1239 aaPredicted RBP15.87■□□□□ 0.13
COL5A1-205ENST00000464187 CYP27A1Q02318 531 aa15.87■□□□□ 0.13
COL5A1-205ENST00000464187 ADAM9Q13443 819 aa15.87■□□□□ 0.13
COL5A1-205ENST00000464187 TARBP2Q15633 366 aaKnown RBP15.87■□□□□ 0.13
COL5A1-205ENST00000464187 WHAMMP3Q1A5X7 153 aa15.87■□□□□ 0.13
COL5A1-205ENST00000464187 KNOP1Q1ED39 458 aaKnown RBP15.87■□□□□ 0.13
COL5A1-205ENST00000464187 BMT2Q1RMZ1 405 aa15.87■□□□□ 0.13
COL5A1-205ENST00000464187 MCPH1Q8NEM0 835 aa15.87■□□□□ 0.13
COL5A1-205ENST00000464187 OR6J1Q8NGC5 347 aa15.87■□□□□ 0.13
COL5A1-205ENST00000464187 ATP8B4Q8TF62 1192 aa15.87■□□□□ 0.13
COL5A1-205ENST00000464187 CCDC42Q96M95 316 aa15.87■□□□□ 0.13
COL5A1-205ENST00000464187 CEP89Q96ST8 783 aa15.87■□□□□ 0.13
COL5A1-205ENST00000464187 XPNPEP1Q9NQW7 623 aa15.87■□□□□ 0.13
COL5A1-205ENST00000464187 GNEQ9Y223 722 aaKnown RBP15.87■□□□□ 0.13
COL5A1-205ENST00000464187 TRAF3IP3Q9Y228 551 aa15.87■□□□□ 0.13
COL5A1-205ENST00000464187 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.87■□□□□ 0.13
COL5A1-205ENST00000464187 CETN3O15182 167 aa15.86■□□□□ 0.13
COL5A1-205ENST00000464187 EIF3DO15371 548 aaKnown RBP eCLIP15.86■□□□□ 0.13
COL5A1-205ENST00000464187 PPFIA4O75335 1185 aa15.86■□□□□ 0.13
COL5A1-205ENST00000464187 LGALS2P05162 132 aa15.86■□□□□ 0.13
COL5A1-205ENST00000464187 NR2F2P24468 414 aa15.86■□□□□ 0.13
COL5A1-205ENST00000464187 EIF4A3P38919 411 aaKnown RBP15.86■□□□□ 0.13
COL5A1-205ENST00000464187 SOX10P56693 466 aa15.86■□□□□ 0.13
COL5A1-205ENST00000464187 PLCB4Q15147 1175 aa15.86■□□□□ 0.13
COL5A1-205ENST00000464187 ZC2HC1CQ53FD0 456 aaPredicted RBP15.86■□□□□ 0.13
COL5A1-205ENST00000464187 SLC7A3Q8WY07 619 aa15.86■□□□□ 0.13
COL5A1-205ENST00000464187 TRIB2Q92519 343 aa15.86■□□□□ 0.13
COL5A1-205ENST00000464187 KIFAP3Q92845 792 aa15.86■□□□□ 0.13
COL5A1-205ENST00000464187 LSM14BQ9BX40 385 aaKnown RBP15.86■□□□□ 0.13
COL5A1-205ENST00000464187 DHX33Q9H6R0 707 aaKnown RBP15.86■□□□□ 0.13
COL5A1-205ENST00000464187 ERAP1Q9NZ08 941 aa15.86■□□□□ 0.13
COL5A1-205ENST00000464187 CEP72Q9P209 647 aa15.86■□□□□ 0.13
COL5A1-205ENST00000464187 MYO6Q9UM54 1294 aa15.86■□□□□ 0.13
COL5A1-205ENST00000464187 WDR81Q562E7 1941 aa15.86■□□□□ 0.13
COL5A1-205ENST00000464187 DYNC1LI2O43237 492 aaPredicted RBP15.85■□□□□ 0.13
COL5A1-205ENST00000464187 LCA5LO95447 670 aa15.85■□□□□ 0.13
COL5A1-205ENST00000464187 MMP3P08254 477 aa15.85■□□□□ 0.13
COL5A1-205ENST00000464187 KIF11P52732 1056 aa15.85■□□□□ 0.13
COL5A1-205ENST00000464187 PEX3P56589 373 aa15.85■□□□□ 0.13
COL5A1-205ENST00000464187 KCNA1Q09470 495 aa15.85■□□□□ 0.13
COL5A1-205ENST00000464187 EMC2Q15006 297 aa15.85■□□□□ 0.13
COL5A1-205ENST00000464187 TRAPPC11Q7Z392 1133 aa15.85■□□□□ 0.13
COL5A1-205ENST00000464187 CACNA2D4Q7Z3S7 1137 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms