RNA–Protein interactions for RNA: ENST00000463818.1

SF3A1-205, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-205ENST00000463818 CDCA3Q99618 268 aaPredicted RBP21.06■□□□□ 0.96
SF3A1-205ENST00000463818 HSD17B14Q9BPX1 270 aa21.06■□□□□ 0.96
SF3A1-205ENST00000463818 TTC12Q9H892 705 aaPredicted RBP21.06■□□□□ 0.96
SF3A1-205ENST00000463818 NGRNQ9NPE2 291 aaKnown RBP21.06■□□□□ 0.96
SF3A1-205ENST00000463818 C11orf16Q9NQ32 467 aa21.06■□□□□ 0.96
SF3A1-205ENST00000463818 BARX2Q9UMQ3 279 aaPredicted RBP21.06■□□□□ 0.96
SF3A1-205ENST00000463818 FNDC1Q4ZHG4 1894 aaPredicted RBP21.06■□□□□ 0.96
SF3A1-205ENST00000463818 FAM86C2PA6NEL3 165 aa21.05■□□□□ 0.96
SF3A1-205ENST00000463818 ASAP2O43150 1006 aa21.05■□□□□ 0.96
SF3A1-205ENST00000463818 ZNF623O75123 536 aa21.05■□□□□ 0.96
SF3A1-205ENST00000463818 ALADP13716 330 aa21.05■□□□□ 0.96
SF3A1-205ENST00000463818 TXKP42681 527 aa21.05■□□□□ 0.96
SF3A1-205ENST00000463818 RBM10P98175 930 aaKnown RBP21.05■□□□□ 0.96
SF3A1-205ENST00000463818 EMC2Q15006 297 aa21.05■□□□□ 0.96
SF3A1-205ENST00000463818 SRGAP1Q7Z6B7 1085 aa21.05■□□□□ 0.96
SF3A1-205ENST00000463818 SLC39A11Q8N1S5 342 aa21.05■□□□□ 0.96
SF3A1-205ENST00000463818 TCP11Q8WWU5 503 aa21.05■□□□□ 0.96
SF3A1-205ENST00000463818 TCF25Q9BQ70 676 aa21.05■□□□□ 0.96
SF3A1-205ENST00000463818 MRPL9Q9BYD2 267 aaKnown RBP21.05■□□□□ 0.96
SF3A1-205ENST00000463818 MINDY3Q9H8M7 445 aa21.05■□□□□ 0.96
SF3A1-205ENST00000463818 ENTPD7Q9NQZ7 604 aa21.05■□□□□ 0.96
SF3A1-205ENST00000463818 FAM105AQ9NUU6 356 aa21.05■□□□□ 0.96
SF3A1-205ENST00000463818 HIDE1A8MVS5 230 aa21.04■□□□□ 0.96
SF3A1-205ENST00000463818 NT5C1B-RDH14C9J2C7 533 aa21.04■□□□□ 0.96
SF3A1-205ENST00000463818 GAS2O43903 313 aaKnown RBP21.04■□□□□ 0.96
SF3A1-205ENST00000463818 NEMFO60524 1076 aa21.04■□□□□ 0.96
SF3A1-205ENST00000463818 LYPLA2O95372 231 aa21.04■□□□□ 0.96
SF3A1-205ENST00000463818 ATP2B1P20020 1258 aa21.04■□□□□ 0.96
SF3A1-205ENST00000463818 ALDH7A1P49419 539 aaKnown RBP21.04■□□□□ 0.96
SF3A1-205ENST00000463818 BCAR1P56945 870 aa21.04■□□□□ 0.96
SF3A1-205ENST00000463818 GUCY1B3Q02153 619 aa21.04■□□□□ 0.96
SF3A1-205ENST00000463818 TMC7Q7Z402 723 aa21.04■□□□□ 0.96
SF3A1-205ENST00000463818 FERMT3Q86UX7 667 aa21.04■□□□□ 0.96
SF3A1-205ENST00000463818 CCDC83Q8IWF9 413 aa21.04■□□□□ 0.96
SF3A1-205ENST00000463818 VN1R2Q8NFZ6 395 aa21.04■□□□□ 0.96
SF3A1-205ENST00000463818 MTMR9Q96QG7 549 aa21.04■□□□□ 0.96
SF3A1-205ENST00000463818 MEIS3P2A8K0S8 358 aa21.03■□□□□ 0.96
SF3A1-205ENST00000463818 OFD1O75665 1012 aa21.03■□□□□ 0.96
SF3A1-205ENST00000463818 HOXA11P31270 313 aaPredicted RBP21.03■□□□□ 0.96
SF3A1-205ENST00000463818 RAB27AP51159 221 aa21.03■□□□□ 0.96
SF3A1-205ENST00000463818 SAFBQ15424 915 aaKnown RBP eCLIP21.03■□□□□ 0.96
SF3A1-205ENST00000463818 GLB1LQ6UWU2 654 aa21.03■□□□□ 0.96
SF3A1-205ENST00000463818 RNF149Q8NC42 400 aa21.03■□□□□ 0.96
SF3A1-205ENST00000463818 SMRP1Q8NCR6 262 aa21.03■□□□□ 0.96
SF3A1-205ENST00000463818 PGBD4Q96DM1 585 aa21.03■□□□□ 0.96
SF3A1-205ENST00000463818 POP1Q99575 1024 aaKnown RBP21.03■□□□□ 0.96
SF3A1-205ENST00000463818 MTRQ99707 1265 aa21.03■□□□□ 0.96
SF3A1-205ENST00000463818 XPNPEP1Q9NQW7 623 aa21.03■□□□□ 0.96
SF3A1-205ENST00000463818 ANKEF1Q9NU02 776 aa21.03■□□□□ 0.96
SF3A1-205ENST00000463818 AGPAT5Q9NUQ2 364 aa21.03■□□□□ 0.96
SF3A1-205ENST00000463818 PCDHB2Q9Y5E7 798 aa21.03■□□□□ 0.96
SF3A1-205ENST00000463818 KIAA1671Q9BY89 1806 aa21.03■□□□□ 0.96
SF3A1-205ENST00000463818 ATG2AQ2TAZ0 1938 aa21.02■□□□□ 0.96
SF3A1-205ENST00000463818 FSD2A1L4K1 749 aa21.02■□□□□ 0.96
SF3A1-205ENST00000463818 DCXO43602 365 aa21.02■□□□□ 0.96
SF3A1-205ENST00000463818 NOMO2Q5JPE7 1267 aa21.02■□□□□ 0.96
SF3A1-205ENST00000463818 MRPL10Q7Z7H8 261 aaKnown RBP21.02■□□□□ 0.96
SF3A1-205ENST00000463818 RSPH1Q8WYR4 309 aa21.02■□□□□ 0.96
SF3A1-205ENST00000463818 TMEM60Q9H2L4 133 aa21.02■□□□□ 0.96
SF3A1-205ENST00000463818 INPP5FQ9Y2H2 1132 aa21.02■□□□□ 0.96
SF3A1-205ENST00000463818 A0A087WWV3 80 aa21.01■□□□□ 0.95
SF3A1-205ENST00000463818 MCM7P33993 719 aa21.01■□□□□ 0.95
SF3A1-205ENST00000463818 KCNC3Q14003 757 aa21.01■□□□□ 0.95
SF3A1-205ENST00000463818 TMEM184AQ6ZMB5 413 aa21.01■□□□□ 0.95
SF3A1-205ENST00000463818 AGMOQ6ZNB7 445 aa21.01■□□□□ 0.95
SF3A1-205ENST00000463818 MRPL43Q8N983 215 aaKnown RBP21.01■□□□□ 0.95
SF3A1-205ENST00000463818 C8orf76Q96K31 380 aa21.01■□□□□ 0.95
SF3A1-205ENST00000463818 LLPHQ9BRT6 129 aaKnown RBP21.01■□□□□ 0.95
SF3A1-205ENST00000463818 NRDE2Q9H7Z3 1164 aa21.01■□□□□ 0.95
SF3A1-205ENST00000463818 TBC1D13Q9NVG8 400 aa21.01■□□□□ 0.95
SF3A1-205ENST00000463818 USP15Q9Y4E8 981 aaPredicted RBP21.01■□□□□ 0.95
SF3A1-205ENST00000463818 ZC3H11AO75152 810 aaKnown RBP eCLIP21■□□□□ 0.95
SF3A1-205ENST00000463818 CXCL14O95715 111 aa21■□□□□ 0.95
SF3A1-205ENST00000463818 GALTP07902 379 aa21■□□□□ 0.95
SF3A1-205ENST00000463818 RNASELQ05823 741 aaKnown RBP21■□□□□ 0.95
SF3A1-205ENST00000463818 MXD4Q14582 209 aaPredicted RBP21■□□□□ 0.95
SF3A1-205ENST00000463818 UBXN11Q5T124 520 aa21■□□□□ 0.95
SF3A1-205ENST00000463818 LLGL2Q6P1M3 1020 aa21■□□□□ 0.95
SF3A1-205ENST00000463818 PIGOQ8TEQ8 1089 aa21■□□□□ 0.95
SF3A1-205ENST00000463818 TMEM169Q96HH4 297 aa21■□□□□ 0.95
SF3A1-205ENST00000463818 ZSCAN31Q96LW9 406 aaPredicted RBP21■□□□□ 0.95
SF3A1-205ENST00000463818 PLXNA4Q9HCM2 1894 aa20.99■□□□□ 0.95
SF3A1-205ENST00000463818 C2orf71A6NGG8 1288 aa20.99■□□□□ 0.95
SF3A1-205ENST00000463818 DGAT1O75907 488 aa20.99■□□□□ 0.95
SF3A1-205ENST00000463818 XRCC6P12956 609 aaKnown RBP eCLIP20.99■□□□□ 0.95
SF3A1-205ENST00000463818 TECP42680 631 aa20.99■□□□□ 0.95
SF3A1-205ENST00000463818 PTENP60484 403 aa20.99■□□□□ 0.95
SF3A1-205ENST00000463818 SMC1AQ14683 1233 aaKnown RBP20.99■□□□□ 0.95
SF3A1-205ENST00000463818 ZNF174Q15697 407 aa20.99■□□□□ 0.95
SF3A1-205ENST00000463818 ANKRD54Q6NXT1 300 aa20.99■□□□□ 0.95
SF3A1-205ENST00000463818 RNF135Q8IUD6 432 aa20.99■□□□□ 0.95
SF3A1-205ENST00000463818 KIF2CQ99661 725 aa20.99■□□□□ 0.95
SF3A1-205ENST00000463818 GBP3Q9H0R5 595 aa20.99■□□□□ 0.95
SF3A1-205ENST00000463818 POTEMA6NI47 508 aa20.98■□□□□ 0.95
SF3A1-205ENST00000463818 SPATA31C1P0DKV0 1188 aa20.98■□□□□ 0.95
SF3A1-205ENST00000463818 SRGAP2BP0DMP2 458 aa20.98■□□□□ 0.95
SF3A1-205ENST00000463818 ARL2P36404 184 aa20.98■□□□□ 0.95
SF3A1-205ENST00000463818 RARRES1P49788 294 aa20.98■□□□□ 0.95
SF3A1-205ENST00000463818 POU5F1BQ06416 359 aa20.98■□□□□ 0.95
SF3A1-205ENST00000463818 TFDP1Q14186 410 aa20.98■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms