RNA–Protein interactions for RNA: ENST00000463428.5

PHACTR4-203, Transcript of phosphatase and actin regulator 4, humanhuman

TSL 1 (best)

Gene PHACTR4, Length 1,421 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR4-203ENST00000463428 CCDC47Q96A33 483 aaKnown RBP15.31■□□□□ 0.04
PHACTR4-203ENST00000463428 CCDC113Q9H0I3 377 aa15.31■□□□□ 0.04
PHACTR4-203ENST00000463428 MINDY3Q9H8M7 445 aa15.31■□□□□ 0.04
PHACTR4-203ENST00000463428 MRPL44Q9H9J2 332 aaKnown RBP15.31■□□□□ 0.04
PHACTR4-203ENST00000463428 SLC39A2Q9NP94 309 aa15.31■□□□□ 0.04
PHACTR4-203ENST00000463428 GDAQ9Y2T3 454 aa15.31■□□□□ 0.04
PHACTR4-203ENST00000463428 UMODL1Q5DID0 1318 aa15.31■□□□□ 0.04
PHACTR4-203ENST00000463428 TRIM43BA6NCK2 446 aa15.3■□□□□ 0.04
PHACTR4-203ENST00000463428 KIAA0355O15063 1070 aa15.3■□□□□ 0.04
PHACTR4-203ENST00000463428 CTSHP09668 335 aa15.3■□□□□ 0.04
PHACTR4-203ENST00000463428 IQCF3P0C7M6 154 aa15.3■□□□□ 0.04
PHACTR4-203ENST00000463428 DARSP14868 501 aaKnown RBP15.3■□□□□ 0.04
PHACTR4-203ENST00000463428 MBTD1Q05BQ5 628 aa15.3■□□□□ 0.04
PHACTR4-203ENST00000463428 BFSP2Q13515 415 aa15.3■□□□□ 0.04
PHACTR4-203ENST00000463428 MBTPS1Q14703 1052 aa15.3■□□□□ 0.04
PHACTR4-203ENST00000463428 GPNMBQ14956 572 aa15.3■□□□□ 0.04
PHACTR4-203ENST00000463428 COBLL1Q53SF7 1204 aa15.3■□□□□ 0.04
PHACTR4-203ENST00000463428 SRGAP1Q7Z6B7 1085 aa15.3■□□□□ 0.04
PHACTR4-203ENST00000463428 SLC17A8Q8NDX2 589 aa15.3■□□□□ 0.04
PHACTR4-203ENST00000463428 DEPTORQ8TB45 409 aa15.3■□□□□ 0.04
PHACTR4-203ENST00000463428 NLRP7Q8WX94 980 aa15.3■□□□□ 0.04
PHACTR4-203ENST00000463428 TRIM43Q96BQ3 446 aaPredicted RBP15.3■□□□□ 0.04
PHACTR4-203ENST00000463428 OSMRQ99650 979 aa15.3■□□□□ 0.04
PHACTR4-203ENST00000463428 GCOM2Q9BZD3 368 aaPredicted RBP15.3■□□□□ 0.04
PHACTR4-203ENST00000463428 FZD8Q9H461 694 aa15.3■□□□□ 0.04
PHACTR4-203ENST00000463428 TMEM134Q9H6X4 195 aa15.3■□□□□ 0.04
PHACTR4-203ENST00000463428 TMEM39AQ9NV64 488 aa15.3■□□□□ 0.04
PHACTR4-203ENST00000463428 MKI67P46013 3256 aaKnown RBP15.3■□□□□ 0.04
PHACTR4-203ENST00000463428 SCN5AQ14524 2016 aa15.3■□□□□ 0.04
PHACTR4-203ENST00000463428 DENND3A2RUS2 1198 aa15.29■□□□□ 0.04
PHACTR4-203ENST00000463428 K7ENM7 598 aa15.29■□□□□ 0.04
PHACTR4-203ENST00000463428 CSDE1O75534 798 aaKnown RBP15.29■□□□□ 0.04
PHACTR4-203ENST00000463428 LETM1O95202 739 aaPredicted RBP15.29■□□□□ 0.04
PHACTR4-203ENST00000463428 EDN1P05305 212 aa15.29■□□□□ 0.04
PHACTR4-203ENST00000463428 SELPP16109 830 aa15.29■□□□□ 0.04
PHACTR4-203ENST00000463428 EIF4BP23588 611 aaKnown RBP15.29■□□□□ 0.04
PHACTR4-203ENST00000463428 HOXD13P35453 343 aa15.29■□□□□ 0.04
PHACTR4-203ENST00000463428 PHKA2P46019 1235 aa15.29■□□□□ 0.04
PHACTR4-203ENST00000463428 AMHR2Q16671 573 aa15.29■□□□□ 0.04
PHACTR4-203ENST00000463428 ZSCAN23Q3MJ62 389 aa15.29■□□□□ 0.04
PHACTR4-203ENST00000463428 SMYD4Q8IYR2 804 aaPredicted RBP15.29■□□□□ 0.04
PHACTR4-203ENST00000463428 CCDC155Q8N6L0 562 aa15.29■□□□□ 0.04
PHACTR4-203ENST00000463428 SCFD1Q8WVM8 642 aa15.29■□□□□ 0.04
PHACTR4-203ENST00000463428 FUCA2Q9BTY2 467 aa15.29■□□□□ 0.04
PHACTR4-203ENST00000463428 WNT8AQ9H1J5 351 aa15.29■□□□□ 0.04
PHACTR4-203ENST00000463428 C2orf40Q9H1Z8 148 aa15.29■□□□□ 0.04
PHACTR4-203ENST00000463428 HIPK3Q9H422 1215 aa15.29■□□□□ 0.04
PHACTR4-203ENST00000463428 SQORQ9Y6N5 450 aa15.29■□□□□ 0.04
PHACTR4-203ENST00000463428 TANC1Q9C0D5 1861 aa15.29■□□□□ 0.04
PHACTR4-203ENST00000463428 TET1Q8NFU7 2136 aa15.29■□□□□ 0.04
PHACTR4-203ENST00000463428 H0YCG3 227 aa15.28■□□□□ 0.04
PHACTR4-203ENST00000463428 K7ERI5 159 aa15.28■□□□□ 0.04
PHACTR4-203ENST00000463428 M0QZ92 97 aa15.28■□□□□ 0.04
PHACTR4-203ENST00000463428 EIF3DO15371 548 aaKnown RBP eCLIP15.28■□□□□ 0.04
PHACTR4-203ENST00000463428 PRPF6O94906 941 aaKnown RBP15.28■□□□□ 0.04
PHACTR4-203ENST00000463428 GCNT3O95395 438 aa15.28■□□□□ 0.04
PHACTR4-203ENST00000463428 CD44P16070 742 aaKnown RBP15.28■□□□□ 0.04
PHACTR4-203ENST00000463428 SCP2P22307 547 aa15.28■□□□□ 0.04
PHACTR4-203ENST00000463428 ITGB8P26012 769 aa15.28■□□□□ 0.04
PHACTR4-203ENST00000463428 EFNA5P52803 228 aa15.28■□□□□ 0.04
PHACTR4-203ENST00000463428 NLRP12P59046 1061 aa15.28■□□□□ 0.04
PHACTR4-203ENST00000463428 KCNA1Q09470 495 aa15.28■□□□□ 0.04
PHACTR4-203ENST00000463428 ALCAMQ13740 583 aa15.28■□□□□ 0.04
PHACTR4-203ENST00000463428 FAM187BQ17R55 369 aa15.28■□□□□ 0.04
PHACTR4-203ENST00000463428 BMT2Q1RMZ1 405 aa15.28■□□□□ 0.04
PHACTR4-203ENST00000463428 FBXO47Q5MNV8 452 aa15.28■□□□□ 0.04
PHACTR4-203ENST00000463428 PPP4R3CPQ6ZMV5 832 aa15.28■□□□□ 0.04
PHACTR4-203ENST00000463428 LRRC8DQ7L1W4 858 aa15.28■□□□□ 0.04
PHACTR4-203ENST00000463428 ZBTB8OSQ8IWT0 167 aa15.28■□□□□ 0.04
PHACTR4-203ENST00000463428 HVCN1Q96D96 273 aa15.28■□□□□ 0.04
PHACTR4-203ENST00000463428 GTPBP4Q9BZE4 634 aaKnown RBP15.28■□□□□ 0.04
PHACTR4-203ENST00000463428 TBX20Q9UMR3 447 aa15.28■□□□□ 0.04
PHACTR4-203ENST00000463428 GINS2Q9Y248 185 aa15.28■□□□□ 0.04
PHACTR4-203ENST00000463428 NOC2LQ9Y3T9 749 aaKnown RBP15.28■□□□□ 0.04
PHACTR4-203ENST00000463428 PCDHB13Q9Y5F0 798 aa15.28■□□□□ 0.04
PHACTR4-203ENST00000463428 PHLPP2Q6ZVD8 1323 aa15.27■□□□□ 0.04
PHACTR4-203ENST00000463428 SYCE3A1L190 88 aa15.27■□□□□ 0.04
PHACTR4-203ENST00000463428 PPP1R3GB7ZBB8 358 aa15.27■□□□□ 0.04
PHACTR4-203ENST00000463428 CYP2C18P33260 490 aa15.27■□□□□ 0.04
PHACTR4-203ENST00000463428 PRCPP42785 496 aa15.27■□□□□ 0.04
PHACTR4-203ENST00000463428 LPIN1Q14693 890 aa15.27■□□□□ 0.04
PHACTR4-203ENST00000463428 L1TD1Q5T7N2 865 aaKnown RBP15.27■□□□□ 0.04
PHACTR4-203ENST00000463428 FAM228AQ86W67 206 aa15.27■□□□□ 0.04
PHACTR4-203ENST00000463428 MAP4K3Q8IVH8 894 aa15.27■□□□□ 0.04
PHACTR4-203ENST00000463428 ADSSL1Q8N142 457 aa15.27■□□□□ 0.04
PHACTR4-203ENST00000463428 GUF1Q8N442 669 aaKnown RBP15.27■□□□□ 0.04
PHACTR4-203ENST00000463428 HTATIP2Q9BUP3 242 aa15.27■□□□□ 0.04
PHACTR4-203ENST00000463428 PPP1R12CQ9BZL4 782 aa15.27■□□□□ 0.04
PHACTR4-203ENST00000463428 INO80BQ9C086 356 aaPredicted RBP15.27■□□□□ 0.04
PHACTR4-203ENST00000463428 IKZF4Q9H2S9 585 aa15.27■□□□□ 0.04
PHACTR4-203ENST00000463428 AGO3Q9H9G7 860 aaKnown RBP15.27■□□□□ 0.04
PHACTR4-203ENST00000463428 TTLL13PA6NNM8 815 aa15.26■□□□□ 0.03
PHACTR4-203ENST00000463428 INO80B-WBP1J3KQ70 363 aa15.26■□□□□ 0.03
PHACTR4-203ENST00000463428 ACKR2O00590 384 aa15.26■□□□□ 0.03
PHACTR4-203ENST00000463428 NBNO60934 754 aa15.26■□□□□ 0.03
PHACTR4-203ENST00000463428 TIMP1P01033 207 aa15.26■□□□□ 0.03
PHACTR4-203ENST00000463428 FGFR4P22455 802 aa15.26■□□□□ 0.03
PHACTR4-203ENST00000463428 ABCD1P33897 745 aa15.26■□□□□ 0.03
PHACTR4-203ENST00000463428 CCL23P55773 120 aa15.26■□□□□ 0.03
PHACTR4-203ENST00000463428 MAPK6Q16659 721 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms