RNA–Protein interactions for RNA: ENST00000463369.5

SHQ1-203, Transcript of SHQ1, H/ACA ribonucleoprotein assembly factor, humanhuman

TSL 2 BASIC

Gene SHQ1, Length 2,065 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHQ1-203ENST00000463369 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.43□□□□□ -0.9
SHQ1-203ENST00000463369 PCDHA13Q9Y5I0 950 aa9.43□□□□□ -0.9
SHQ1-203ENST00000463369 ATRNL1Q5VV63 1379 aa9.43□□□□□ -0.9
SHQ1-203ENST00000463369 ZSCAN5CA6NGD5 496 aaPredicted RBP9.43□□□□□ -0.9
SHQ1-203ENST00000463369 H0YGN5 161 aa9.43□□□□□ -0.9
SHQ1-203ENST00000463369 MPHOSPH10O00566 681 aaKnown RBP9.43□□□□□ -0.9
SHQ1-203ENST00000463369 IFIT3O14879 490 aaKnown RBP9.43□□□□□ -0.9
SHQ1-203ENST00000463369 ORC4O43929 436 aa9.43□□□□□ -0.9
SHQ1-203ENST00000463369 GSTA1P08263 222 aa9.43□□□□□ -0.9
SHQ1-203ENST00000463369 TRIM21P19474 475 aaKnown RBP9.43□□□□□ -0.9
SHQ1-203ENST00000463369 DRD4P21917 467 aa9.43□□□□□ -0.9
SHQ1-203ENST00000463369 PRCPP42785 496 aa9.43□□□□□ -0.9
SHQ1-203ENST00000463369 RPS6KA3P51812 740 aa9.43□□□□□ -0.9
SHQ1-203ENST00000463369 PPP2R2AP63151 447 aa9.43□□□□□ -0.9
SHQ1-203ENST00000463369 TCP10Q12799 353 aa9.43□□□□□ -0.9
SHQ1-203ENST00000463369 KRT26Q7Z3Y9 468 aa9.43□□□□□ -0.9
SHQ1-203ENST00000463369 KRT77Q7Z794 578 aa9.43□□□□□ -0.9
SHQ1-203ENST00000463369 CPLX4Q7Z7G2 160 aa9.43□□□□□ -0.9
SHQ1-203ENST00000463369 CCDC63Q8NA47 563 aa9.43□□□□□ -0.9
SHQ1-203ENST00000463369 FAM151AQ8WW52 585 aa9.43□□□□□ -0.9
SHQ1-203ENST00000463369 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP9.43□□□□□ -0.9
SHQ1-203ENST00000463369 FAM210AQ96ND0 272 aa9.43□□□□□ -0.9
SHQ1-203ENST00000463369 ZNF570Q96NI8 536 aa9.43□□□□□ -0.9
SHQ1-203ENST00000463369 ALS2CR12Q96Q35 445 aa9.43□□□□□ -0.9
SHQ1-203ENST00000463369 DEPDC7Q96QD5 511 aa9.43□□□□□ -0.9
SHQ1-203ENST00000463369 TLR10Q9BXR5 811 aa9.43□□□□□ -0.9
SHQ1-203ENST00000463369 IFIH1Q9BYX4 1025 aaKnown RBP9.43□□□□□ -0.9
SHQ1-203ENST00000463369 TAF1DQ9H5J8 278 aaPredicted RBP9.43□□□□□ -0.9
SHQ1-203ENST00000463369 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.43□□□□□ -0.9
SHQ1-203ENST00000463369 EVLQ9UI08 416 aaPredicted RBP9.43□□□□□ -0.9
SHQ1-203ENST00000463369 L3MBTL1Q9Y468 752 aa9.43□□□□□ -0.9
SHQ1-203ENST00000463369 SLC12A7Q9Y666 1083 aa9.43□□□□□ -0.9
SHQ1-203ENST00000463369 NFS1Q9Y697 457 aa9.43□□□□□ -0.9
SHQ1-203ENST00000463369 CNTNAP1P78357 1384 aa9.42□□□□□ -0.9
SHQ1-203ENST00000463369 B4E1Z4 1266 aa9.42□□□□□ -0.9
SHQ1-203ENST00000463369 TCP10L2B9ZVM9 353 aa9.42□□□□□ -0.9
SHQ1-203ENST00000463369 FESP07332 822 aa9.42□□□□□ -0.9
SHQ1-203ENST00000463369 LIFRP42702 1097 aa9.42□□□□□ -0.9
SHQ1-203ENST00000463369 GJA8P48165 433 aa9.42□□□□□ -0.9
SHQ1-203ENST00000463369 NT5C2P49902 561 aa9.42□□□□□ -0.9
SHQ1-203ENST00000463369 RAB27AP51159 221 aa9.42□□□□□ -0.9
SHQ1-203ENST00000463369 GEMIN4P57678 1058 aaKnown RBP9.42□□□□□ -0.9
SHQ1-203ENST00000463369 GABPAQ06546 454 aa9.42□□□□□ -0.9
SHQ1-203ENST00000463369 ARSHQ5FYA8 562 aa9.42□□□□□ -0.9
SHQ1-203ENST00000463369 TMEM67Q5HYA8 995 aa9.42□□□□□ -0.9
SHQ1-203ENST00000463369 RUFY4Q6ZNE9 571 aa9.42□□□□□ -0.9
SHQ1-203ENST00000463369 C16orf86Q6ZW13 317 aa9.42□□□□□ -0.9
SHQ1-203ENST00000463369 SH3BP5LQ7L8J4 393 aa9.42□□□□□ -0.9
SHQ1-203ENST00000463369 TRIM22Q8IYM9 498 aa9.42□□□□□ -0.9
SHQ1-203ENST00000463369 BORCS6Q96GS4 357 aa9.42□□□□□ -0.9
SHQ1-203ENST00000463369 MS4A14Q96JA4 679 aa9.42□□□□□ -0.9
SHQ1-203ENST00000463369 ZNF700Q9H0M5 742 aa9.42□□□□□ -0.9
SHQ1-203ENST00000463369 NDST4Q9H3R1 872 aa9.42□□□□□ -0.9
SHQ1-203ENST00000463369 THAP9Q9H5L6 903 aa9.42□□□□□ -0.9
SHQ1-203ENST00000463369 ADARB2Q9NS39 739 aaKnown RBP9.42□□□□□ -0.9
SHQ1-203ENST00000463369 RMND1Q9NWS8 449 aa9.42□□□□□ -0.9
SHQ1-203ENST00000463369 NOP53Q9NZM5 478 aaKnown RBP9.42□□□□□ -0.9
SHQ1-203ENST00000463369 ZSWIM5Q9P217 1185 aa9.42□□□□□ -0.9
SHQ1-203ENST00000463369 PI4KBQ9UBF8 816 aa9.42□□□□□ -0.9
SHQ1-203ENST00000463369 SYNPO2Q9UMS6 1093 aa9.42□□□□□ -0.9
SHQ1-203ENST00000463369 DAAM1Q9Y4D1 1078 aa9.42□□□□□ -0.9
SHQ1-203ENST00000463369 A0A1W2PQJ5 194 aa9.41□□□□□ -0.9
SHQ1-203ENST00000463369 CFAP73A6NFT4 308 aa9.41□□□□□ -0.9
SHQ1-203ENST00000463369 DDTLA6NHG4 134 aaPredicted RBP9.41□□□□□ -0.9
SHQ1-203ENST00000463369 A6NHS1 94 aa9.41□□□□□ -0.9
SHQ1-203ENST00000463369 PHF20L1A8MW92 1017 aa9.41□□□□□ -0.9
SHQ1-203ENST00000463369 NCK2O43639 380 aa9.41□□□□□ -0.9
SHQ1-203ENST00000463369 AHCYL1O43865 530 aa9.41□□□□□ -0.9
SHQ1-203ENST00000463369 DEXIO95424 95 aa9.41□□□□□ -0.9
SHQ1-203ENST00000463369 LCA5LO95447 670 aa9.41□□□□□ -0.9
SHQ1-203ENST00000463369 HLA-DOAP06340 250 aa9.41□□□□□ -0.9
SHQ1-203ENST00000463369 CLTAP09496 248 aa9.41□□□□□ -0.9
SHQ1-203ENST00000463369 ALADP13716 330 aa9.41□□□□□ -0.9
SHQ1-203ENST00000463369 HSD17B3P37058 310 aa9.41□□□□□ -0.9
SHQ1-203ENST00000463369 HIRAP54198 1017 aaPredicted RBP9.41□□□□□ -0.9
SHQ1-203ENST00000463369 KCNH2Q12809 1159 aa9.41□□□□□ -0.9
SHQ1-203ENST00000463369 BLMHQ13867 455 aa9.41□□□□□ -0.9
SHQ1-203ENST00000463369 ZNF268Q14587 947 aaPredicted RBP9.41□□□□□ -0.9
SHQ1-203ENST00000463369 SLC5A9Q2M3M2 681 aa9.41□□□□□ -0.9
SHQ1-203ENST00000463369 THEMIS2Q5TEJ8 643 aa9.41□□□□□ -0.9
SHQ1-203ENST00000463369 AGBL2Q5U5Z8 902 aa9.41□□□□□ -0.9
SHQ1-203ENST00000463369 PDXDC2PQ6P474 469 aa9.41□□□□□ -0.9
SHQ1-203ENST00000463369 MYO1HQ8N1T3 1032 aa9.41□□□□□ -0.9
SHQ1-203ENST00000463369 EIF1ADQ8N9N8 165 aaKnown RBP9.41□□□□□ -0.9
SHQ1-203ENST00000463369 TRPM4Q8TD43 1214 aa9.41□□□□□ -0.9
SHQ1-203ENST00000463369 ESR2Q92731 530 aa9.41□□□□□ -0.9
SHQ1-203ENST00000463369 DYNLL2Q96FJ2 89 aa9.41□□□□□ -0.9
SHQ1-203ENST00000463369 MTRQ99707 1265 aa9.41□□□□□ -0.9
SHQ1-203ENST00000463369 RBCK1Q9BYM8 510 aa9.41□□□□□ -0.9
SHQ1-203ENST00000463369 ZNF287Q9HBT7 754 aa9.41□□□□□ -0.9
SHQ1-203ENST00000463369 EXOC1Q9NV70 894 aa9.41□□□□□ -0.9
SHQ1-203ENST00000463369 SLC5A4Q9NY91 659 aa9.41□□□□□ -0.9
SHQ1-203ENST00000463369 LUZP4Q9P127 313 aa9.41□□□□□ -0.9
SHQ1-203ENST00000463369 CNOT8Q9UFF9 292 aaKnown RBP9.41□□□□□ -0.9
SHQ1-203ENST00000463369 TSKSQ9UJT2 592 aa9.41□□□□□ -0.9
SHQ1-203ENST00000463369 SLC12A4Q9UP95 1085 aa9.41□□□□□ -0.9
SHQ1-203ENST00000463369 MAPK8IP1Q9UQF2 711 aa9.41□□□□□ -0.9
SHQ1-203ENST00000463369 TRIM49BA6NDI0 452 aa9.41□□□□□ -0.9
SHQ1-203ENST00000463369 B4DLN1 442 aa9.41□□□□□ -0.9
SHQ1-203ENST00000463369 BACH1O14867 736 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms