RNA–Protein interactions for RNA: ENST00000463007.5

HDAC4-208, Transcript of histone deacetylase 4, humanhuman

TSL 1 (best)

Gene HDAC4, Length 3,158 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-208ENST00000463007 F8VZ95 297 aa13.45□□□□□ -0.26
HDAC4-208ENST00000463007 EVI5O60447 810 aa13.45□□□□□ -0.26
HDAC4-208ENST00000463007 SPATA31C1P0DKV0 1188 aa13.45□□□□□ -0.26
HDAC4-208ENST00000463007 MARCKSL1P49006 195 aa13.45□□□□□ -0.26
HDAC4-208ENST00000463007 GSCP56915 257 aaPredicted RBP13.45□□□□□ -0.26
HDAC4-208ENST00000463007 KIAA1755Q5JYT7 1200 aa13.45□□□□□ -0.26
HDAC4-208ENST00000463007 SPATS2Q86XZ4 545 aaKnown RBP13.45□□□□□ -0.26
HDAC4-208ENST00000463007 CYP2W1Q8TAV3 490 aa13.45□□□□□ -0.26
HDAC4-208ENST00000463007 SGSM3Q96HU1 749 aa13.45□□□□□ -0.26
HDAC4-208ENST00000463007 PRMT6Q96LA8 375 aaPredicted RBP13.45□□□□□ -0.26
HDAC4-208ENST00000463007 REEP2Q9BRK0 252 aa13.45□□□□□ -0.26
HDAC4-208ENST00000463007 TBK1Q9UHD2 729 aa13.45□□□□□ -0.26
HDAC4-208ENST00000463007 VAV3Q9UKW4 847 aa13.45□□□□□ -0.26
HDAC4-208ENST00000463007 DAAM1Q9Y4D1 1078 aa13.45□□□□□ -0.26
HDAC4-208ENST00000463007 FAM86B1E9PN63 330 aa13.44□□□□□ -0.26
HDAC4-208ENST00000463007 RBAK-RBAKDNI3L0D1 243 aa13.44□□□□□ -0.26
HDAC4-208ENST00000463007 ACSL3O95573 720 aa13.44□□□□□ -0.26
HDAC4-208ENST00000463007 FAM86B2P0C5J1 330 aa13.44□□□□□ -0.26
HDAC4-208ENST00000463007 ARHGAP4P98171 946 aa13.44□□□□□ -0.26
HDAC4-208ENST00000463007 ABCB5Q2M3G0 1257 aa13.44□□□□□ -0.26
HDAC4-208ENST00000463007 DENND2CQ68D51 928 aa13.44□□□□□ -0.26
HDAC4-208ENST00000463007 C6orf89Q6UWU4 347 aa13.44□□□□□ -0.26
HDAC4-208ENST00000463007 CPNE8Q86YQ8 564 aa13.44□□□□□ -0.26
HDAC4-208ENST00000463007 MREGQ8N565 214 aa13.44□□□□□ -0.26
HDAC4-208ENST00000463007 PRCCQ92733 491 aaPredicted RBP13.44□□□□□ -0.26
HDAC4-208ENST00000463007 STAMBPL1Q96FJ0 436 aa13.44□□□□□ -0.26
HDAC4-208ENST00000463007 CHMP6Q96FZ7 201 aa13.44□□□□□ -0.26
HDAC4-208ENST00000463007 PBKQ96KB5 322 aa13.44□□□□□ -0.26
HDAC4-208ENST00000463007 XPO6Q96QU8 1125 aaKnown RBP13.44□□□□□ -0.26
HDAC4-208ENST00000463007 INTS9Q9NV88 658 aaKnown RBP13.44□□□□□ -0.26
HDAC4-208ENST00000463007 GDF11O95390 407 aa13.44□□□□□ -0.26
HDAC4-208ENST00000463007 NMT1P30419 496 aaKnown RBP13.44□□□□□ -0.26
HDAC4-208ENST00000463007 PEX19P40855 299 aa13.44□□□□□ -0.26
HDAC4-208ENST00000463007 SNX1Q13596 522 aa13.44□□□□□ -0.26
HDAC4-208ENST00000463007 DPY19L2P1Q6NXN4 242 aa13.44□□□□□ -0.26
HDAC4-208ENST00000463007 SEPT14Q6ZU15 432 aa13.44□□□□□ -0.26
HDAC4-208ENST00000463007 ARHGAP27Q6ZUM4 889 aa13.44□□□□□ -0.26
HDAC4-208ENST00000463007 CCDC197Q8NCU1 140 aa13.44□□□□□ -0.26
HDAC4-208ENST00000463007 CTNNBL1Q8WYA6 563 aaPredicted RBP13.44□□□□□ -0.26
HDAC4-208ENST00000463007 ARHGEF26Q96DR7 871 aa13.44□□□□□ -0.26
HDAC4-208ENST00000463007 MRRFQ96E11 262 aaKnown RBP13.44□□□□□ -0.26
HDAC4-208ENST00000463007 BTBD6Q96KE9 485 aa13.44□□□□□ -0.26
HDAC4-208ENST00000463007 POP1Q99575 1024 aaKnown RBP13.44□□□□□ -0.26
HDAC4-208ENST00000463007 PAIP2Q9BPZ3 127 aaKnown RBP13.44□□□□□ -0.26
HDAC4-208ENST00000463007 TDRD3Q9H7E2 651 aaKnown RBP13.44□□□□□ -0.26
HDAC4-208ENST00000463007 AIPL1Q9NZN9 384 aa13.44□□□□□ -0.26
HDAC4-208ENST00000463007 PKD2L1Q9P0L9 805 aa13.44□□□□□ -0.26
HDAC4-208ENST00000463007 PITPNM2Q9BZ72 1349 aa13.44□□□□□ -0.26
HDAC4-208ENST00000463007 CLSTN1O94985 981 aa13.44□□□□□ -0.26
HDAC4-208ENST00000463007 MYCNP04198 464 aaPredicted RBP13.44□□□□□ -0.26
HDAC4-208ENST00000463007 CYP3A4P08684 503 aa13.44□□□□□ -0.26
HDAC4-208ENST00000463007 CREB1P16220 341 aa13.44□□□□□ -0.26
HDAC4-208ENST00000463007 POLD1P28340 1107 aa13.44□□□□□ -0.26
HDAC4-208ENST00000463007 STAT1P42224 750 aa13.44□□□□□ -0.26
HDAC4-208ENST00000463007 BYSLQ13895 437 aaKnown RBP13.44□□□□□ -0.26
HDAC4-208ENST00000463007 MESDQ14696 234 aa13.44□□□□□ -0.26
HDAC4-208ENST00000463007 IFI16Q16666 785 aaKnown RBP13.44□□□□□ -0.26
HDAC4-208ENST00000463007 EPM2AIP1Q7L775 607 aaPredicted RBP13.44□□□□□ -0.26
HDAC4-208ENST00000463007 CD302Q8IX05 232 aa13.44□□□□□ -0.26
HDAC4-208ENST00000463007 LRRC57Q8N9N7 239 aa13.44□□□□□ -0.26
HDAC4-208ENST00000463007 AMNQ9BXJ7 453 aa13.44□□□□□ -0.26
HDAC4-208ENST00000463007 THAP2Q9H0W7 228 aa13.44□□□□□ -0.26
HDAC4-208ENST00000463007 IGLV3-22A0A075B6J6 115 aa13.43□□□□□ -0.26
HDAC4-208ENST00000463007 BRD2P25440 801 aaKnown RBP13.43□□□□□ -0.26
HDAC4-208ENST00000463007 CTTNQ14247 550 aaKnown RBP13.43□□□□□ -0.26
HDAC4-208ENST00000463007 TNIP1Q15025 636 aa13.43□□□□□ -0.26
HDAC4-208ENST00000463007 PPP2R5AQ15172 486 aa13.43□□□□□ -0.26
HDAC4-208ENST00000463007 SYDE2Q5VT97 1194 aa13.43□□□□□ -0.26
HDAC4-208ENST00000463007 NT5DC3Q86UY8 548 aa13.43□□□□□ -0.26
HDAC4-208ENST00000463007 CATSPER3Q86XQ3 398 aa13.43□□□□□ -0.26
HDAC4-208ENST00000463007 SLFN12Q8IYM2 578 aa13.43□□□□□ -0.26
HDAC4-208ENST00000463007 RUBCNQ92622 972 aa13.43□□□□□ -0.26
HDAC4-208ENST00000463007 ABCF3Q9NUQ8 709 aa13.43□□□□□ -0.26
HDAC4-208ENST00000463007 CTTNBP2NLQ9P2B4 639 aa13.43□□□□□ -0.26
HDAC4-208ENST00000463007 PGAP2Q9UHJ9 254 aa13.43□□□□□ -0.26
HDAC4-208ENST00000463007 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.43□□□□□ -0.26
HDAC4-208ENST00000463007 NR3C1P04150 777 aa13.43□□□□□ -0.26
HDAC4-208ENST00000463007 MYBL1P10243 752 aa13.43□□□□□ -0.26
HDAC4-208ENST00000463007 HOXD13P35453 343 aa13.43□□□□□ -0.26
HDAC4-208ENST00000463007 ZNF76P36508 570 aa13.43□□□□□ -0.26
HDAC4-208ENST00000463007 BIRC3Q13489 604 aa13.43□□□□□ -0.26
HDAC4-208ENST00000463007 LONRF1Q17RB8 773 aa13.43□□□□□ -0.26
HDAC4-208ENST00000463007 ANKS4BQ8N8V4 417 aa13.43□□□□□ -0.26
HDAC4-208ENST00000463007 CCDC63Q8NA47 563 aa13.43□□□□□ -0.26
HDAC4-208ENST00000463007 TATDN2Q93075 761 aa13.43□□□□□ -0.26
HDAC4-208ENST00000463007 CNKSR1Q969H4 720 aa13.43□□□□□ -0.26
HDAC4-208ENST00000463007 FAM118BQ9BPY3 351 aa13.43□□□□□ -0.26
HDAC4-208ENST00000463007 SAMD15Q9P1V8 674 aa13.43□□□□□ -0.26
HDAC4-208ENST00000463007 A8MUI8 341 aa13.42□□□□□ -0.26
HDAC4-208ENST00000463007 TBCAO75347 108 aaKnown RBP13.42□□□□□ -0.26
HDAC4-208ENST00000463007 DRAP1Q14919 205 aaPredicted RBP13.42□□□□□ -0.26
HDAC4-208ENST00000463007 NSMFQ6X4W1 530 aa13.42□□□□□ -0.26
HDAC4-208ENST00000463007 TPH2Q8IWU9 490 aa13.42□□□□□ -0.26
HDAC4-208ENST00000463007 MYCT1Q8N699 235 aa13.42□□□□□ -0.26
HDAC4-208ENST00000463007 KCNV2Q8TDN2 545 aa13.42□□□□□ -0.26
HDAC4-208ENST00000463007 ALG3Q92685 438 aa13.42□□□□□ -0.26
HDAC4-208ENST00000463007 PCIF1Q9H4Z3 704 aa13.42□□□□□ -0.26
HDAC4-208ENST00000463007 TMEM59LQ9UK28 342 aa13.42□□□□□ -0.26
HDAC4-208ENST00000463007 TRIM33Q9UPN9 1127 aa13.42□□□□□ -0.26
HDAC4-208ENST00000463007 G3V3G9 751 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms