RNA–Protein interactions for RNA: ENST00000462730.5

HDAC6-213, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 1,999 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-213ENST00000462730 CCDC62Q6P9F0 684 aa15.8■□□□□ 0.12
HDAC6-213ENST00000462730 DPP9Q86TI2 863 aa15.8■□□□□ 0.12
HDAC6-213ENST00000462730 IFNL1Q8IU54 200 aa15.8■□□□□ 0.12
HDAC6-213ENST00000462730 C12orf56Q8IXR9 622 aa15.8■□□□□ 0.12
HDAC6-213ENST00000462730 SPIRE2Q8WWL2 714 aa15.8■□□□□ 0.12
HDAC6-213ENST00000462730 SYN2Q92777 582 aaPredicted RBP15.8■□□□□ 0.12
HDAC6-213ENST00000462730 HVCN1Q96D96 273 aa15.8■□□□□ 0.12
HDAC6-213ENST00000462730 PCYT2Q99447 389 aa15.8■□□□□ 0.12
HDAC6-213ENST00000462730 DEF6Q9H4E7 631 aa15.8■□□□□ 0.12
HDAC6-213ENST00000462730 PDLIM7Q9NR12 457 aa15.8■□□□□ 0.12
HDAC6-213ENST00000462730 GCNT4Q9P109 453 aa15.8■□□□□ 0.12
HDAC6-213ENST00000462730 ECM2O94769 699 aaPredicted RBP15.8■□□□□ 0.12
HDAC6-213ENST00000462730 TRIM49P0CI25 452 aa15.8■□□□□ 0.12
HDAC6-213ENST00000462730 TRIM49CP0CI26 452 aa15.8■□□□□ 0.12
HDAC6-213ENST00000462730 TXNP10599 105 aaKnown RBP15.8■□□□□ 0.12
HDAC6-213ENST00000462730 KIF11P52732 1056 aa15.8■□□□□ 0.12
HDAC6-213ENST00000462730 TTLL4Q14679 1199 aa15.8■□□□□ 0.12
HDAC6-213ENST00000462730 TMEM63BQ5T3F8 832 aa15.8■□□□□ 0.12
HDAC6-213ENST00000462730 KLHDC7AQ5VTJ3 777 aa15.8■□□□□ 0.12
HDAC6-213ENST00000462730 ZNF771Q7L3S4 317 aaPredicted RBP15.8■□□□□ 0.12
HDAC6-213ENST00000462730 ZNF467Q7Z7K2 595 aaPredicted RBP15.8■□□□□ 0.12
HDAC6-213ENST00000462730 SMC1BQ8NDV3 1235 aa15.8■□□□□ 0.12
HDAC6-213ENST00000462730 SCFD2Q8WU76 684 aa15.8■□□□□ 0.12
HDAC6-213ENST00000462730 SEPT1Q8WYJ6 367 aa15.8■□□□□ 0.12
HDAC6-213ENST00000462730 COPS5Q92905 334 aa15.8■□□□□ 0.12
HDAC6-213ENST00000462730 JAKMIP2Q96AA8 810 aa15.8■□□□□ 0.12
HDAC6-213ENST00000462730 CBWD1Q9BRT8 395 aa15.8■□□□□ 0.12
HDAC6-213ENST00000462730 POLR3FQ9H1D9 316 aaPredicted RBP15.8■□□□□ 0.12
HDAC6-213ENST00000462730 C17orf75Q9HAS0 396 aa15.8■□□□□ 0.12
HDAC6-213ENST00000462730 TRIM10Q9UDY6 481 aa15.8■□□□□ 0.12
HDAC6-213ENST00000462730 TBX20Q9UMR3 447 aa15.8■□□□□ 0.12
HDAC6-213ENST00000462730 EXOC7Q9UPT5 735 aa15.8■□□□□ 0.12
HDAC6-213ENST00000462730 DENND3A2RUS2 1198 aa15.79■□□□□ 0.12
HDAC6-213ENST00000462730 GTPBP10A4D1E9 387 aaKnown RBP15.79■□□□□ 0.12
HDAC6-213ENST00000462730 NOP56O00567 594 aaKnown RBP15.79■□□□□ 0.12
HDAC6-213ENST00000462730 H2AFXP16104 143 aaPredicted RBP15.79■□□□□ 0.12
HDAC6-213ENST00000462730 CYP27A1Q02318 531 aa15.79■□□□□ 0.12
HDAC6-213ENST00000462730 EMC2Q15006 297 aa15.79■□□□□ 0.12
HDAC6-213ENST00000462730 PPP2R5AQ15172 486 aa15.79■□□□□ 0.12
HDAC6-213ENST00000462730 SPA17Q15506 151 aa15.79■□□□□ 0.12
HDAC6-213ENST00000462730 ERCC6LQ2NKX8 1250 aa15.79■□□□□ 0.12
HDAC6-213ENST00000462730 TDRD12Q587J7 1177 aaKnown RBP15.79■□□□□ 0.12
HDAC6-213ENST00000462730 SLC35F6Q8N357 371 aa15.79■□□□□ 0.12
HDAC6-213ENST00000462730 RDH13Q8NBN7 331 aa15.79■□□□□ 0.12
HDAC6-213ENST00000462730 BBXQ8WY36 941 aaPredicted RBP15.79■□□□□ 0.12
HDAC6-213ENST00000462730 MAML3Q96JK9 1138 aa15.79■□□□□ 0.12
HDAC6-213ENST00000462730 GPR20Q99678 358 aa15.79■□□□□ 0.12
HDAC6-213ENST00000462730 HAUS4Q9H6D7 363 aa15.79■□□□□ 0.12
HDAC6-213ENST00000462730 ZNF446Q9NWS9 450 aa15.79■□□□□ 0.12
HDAC6-213ENST00000462730 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.79■□□□□ 0.12
HDAC6-213ENST00000462730 HSPBP1Q9NZL4 362 aa15.79■□□□□ 0.12
HDAC6-213ENST00000462730 GUCA1BQ9UMX6 200 aa15.79■□□□□ 0.12
HDAC6-213ENST00000462730 TFR2Q9UP52 801 aa15.79■□□□□ 0.12
HDAC6-213ENST00000462730 FHOD1Q9Y613 1164 aa15.79■□□□□ 0.12
HDAC6-213ENST00000462730 ZNF263O14978 683 aa15.78■□□□□ 0.12
HDAC6-213ENST00000462730 AKR1B10O60218 316 aa15.78■□□□□ 0.12
HDAC6-213ENST00000462730 TLR2O60603 784 aa15.78■□□□□ 0.12
HDAC6-213ENST00000462730 SERPING1P05155 500 aa15.78■□□□□ 0.12
HDAC6-213ENST00000462730 KRT13P13646 458 aa15.78■□□□□ 0.12
HDAC6-213ENST00000462730 FMO5P49326 533 aa15.78■□□□□ 0.12
HDAC6-213ENST00000462730 POLGP54098 1239 aaPredicted RBP15.78■□□□□ 0.12
HDAC6-213ENST00000462730 SNRPFP62306 86 aaKnown RBP15.78■□□□□ 0.12
HDAC6-213ENST00000462730 BFSP1Q12934 665 aa15.78■□□□□ 0.12
HDAC6-213ENST00000462730 ASIC2Q16515 512 aa15.78■□□□□ 0.12
HDAC6-213ENST00000462730 FAM160B1Q5W0V3 765 aa15.78■□□□□ 0.12
HDAC6-213ENST00000462730 HGSNATQ68CP4 663 aa15.78■□□□□ 0.12
HDAC6-213ENST00000462730 MAP4K3Q8IVH8 894 aa15.78■□□□□ 0.12
HDAC6-213ENST00000462730 DHX37Q8IY37 1157 aaKnown RBP15.78■□□□□ 0.12
HDAC6-213ENST00000462730 LRRN4CLQ8ND94 238 aa15.78■□□□□ 0.12
HDAC6-213ENST00000462730 AFAP1L1Q8TED9 768 aa15.78■□□□□ 0.12
HDAC6-213ENST00000462730 IPO4Q8TEX9 1081 aaKnown RBP15.78■□□□□ 0.12
HDAC6-213ENST00000462730 IFT74Q96LB3 600 aa15.78■□□□□ 0.12
HDAC6-213ENST00000462730 SPATA33Q96N06 139 aa15.78■□□□□ 0.12
HDAC6-213ENST00000462730 VTA1Q9NP79 307 aa15.78■□□□□ 0.12
HDAC6-213ENST00000462730 SIX2Q9NPC8 291 aa15.78■□□□□ 0.12
HDAC6-213ENST00000462730 UCHL3P15374 230 aa15.78■□□□□ 0.12
HDAC6-213ENST00000462730 STAT5BP51692 787 aa15.78■□□□□ 0.12
HDAC6-213ENST00000462730 RTP1P59025 263 aa15.78■□□□□ 0.12
HDAC6-213ENST00000462730 MAPK8IP2Q13387 824 aaPredicted RBP15.78■□□□□ 0.12
HDAC6-213ENST00000462730 SLC9C1Q4G0N8 1177 aa15.78■□□□□ 0.12
HDAC6-213ENST00000462730 CCDC122Q5T0U0 273 aa15.78■□□□□ 0.12
HDAC6-213ENST00000462730 TAPT1Q6NXT6 567 aa15.78■□□□□ 0.12
HDAC6-213ENST00000462730 MAMDC4Q6UXC1 1216 aa15.78■□□□□ 0.12
HDAC6-213ENST00000462730 ZNF662Q6ZS27 426 aa15.78■□□□□ 0.12
HDAC6-213ENST00000462730 XXYLT1Q8NBI6 393 aa15.78■□□□□ 0.12
HDAC6-213ENST00000462730 TMEM174Q8WUU8 243 aa15.78■□□□□ 0.12
HDAC6-213ENST00000462730 KATNBL1Q9H079 304 aa15.78■□□□□ 0.12
HDAC6-213ENST00000462730 MYO1AQ9UBC5 1043 aa15.78■□□□□ 0.12
HDAC6-213ENST00000462730 DIS3Q9Y2L1 958 aaKnown RBP15.78■□□□□ 0.12
HDAC6-213ENST00000462730 ADGRA3Q8IWK6 1321 aa15.77■□□□□ 0.12
HDAC6-213ENST00000462730 SSU72P8A0A1W2PR75 194 aa15.77■□□□□ 0.12
HDAC6-213ENST00000462730 RCCD1A6NED2 376 aa15.77■□□□□ 0.12
HDAC6-213ENST00000462730 SLC15A5A6NIM6 579 aa15.77■□□□□ 0.12
HDAC6-213ENST00000462730 ANKRD63C9JTQ0 380 aa15.77■□□□□ 0.12
HDAC6-213ENST00000462730 VAV2P52735 878 aa15.77■□□□□ 0.12
HDAC6-213ENST00000462730 INHBEP58166 350 aa15.77■□□□□ 0.12
HDAC6-213ENST00000462730 MYL7Q01449 175 aa15.77■□□□□ 0.12
HDAC6-213ENST00000462730 SREBF2Q12772 1141 aa15.77■□□□□ 0.12
HDAC6-213ENST00000462730 TERF2Q15554 542 aa15.77■□□□□ 0.12
HDAC6-213ENST00000462730 TRIM50Q86XT4 487 aa15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms