RNA–Protein interactions for RNA: ENST00000462352.5

CPNE1-221, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-221ENST00000462352 ZHX3Q9H4I2 956 aa13.03□□□□□ -0.32
CPNE1-221ENST00000462352 PARVGQ9HBI0 331 aa13.03□□□□□ -0.32
CPNE1-221ENST00000462352 ERVK-5Q9HDB9 667 aa13.03□□□□□ -0.32
CPNE1-221ENST00000462352 LARSQ9P2J5 1176 aaKnown RBP13.03□□□□□ -0.32
CPNE1-221ENST00000462352 ST3GAL5Q9UNP4 418 aa13.03□□□□□ -0.32
CPNE1-221ENST00000462352 ADGRA3Q8IWK6 1321 aa13.03□□□□□ -0.32
CPNE1-221ENST00000462352 INO80B-WBP1J3KQ70 363 aa13.02□□□□□ -0.33
CPNE1-221ENST00000462352 NR1I2O75469 434 aa13.02□□□□□ -0.33
CPNE1-221ENST00000462352 ACTN1P12814 892 aa13.02□□□□□ -0.33
CPNE1-221ENST00000462352 IDEP14735 1019 aa13.02□□□□□ -0.33
CPNE1-221ENST00000462352 CASP1P29466 404 aa13.02□□□□□ -0.33
CPNE1-221ENST00000462352 BMP8BP34820 402 aa13.02□□□□□ -0.33
CPNE1-221ENST00000462352 MBTD1Q05BQ5 628 aa13.02□□□□□ -0.33
CPNE1-221ENST00000462352 C9orf50Q5SZB4 431 aa13.02□□□□□ -0.33
CPNE1-221ENST00000462352 PRPF38BQ5VTL8 546 aaKnown RBP13.02□□□□□ -0.33
CPNE1-221ENST00000462352 CNNM4Q6P4Q7 775 aa13.02□□□□□ -0.33
CPNE1-221ENST00000462352 CHRDL2Q6WN34 429 aa13.02□□□□□ -0.33
CPNE1-221ENST00000462352 OTOP2Q7RTS6 562 aa13.02□□□□□ -0.33
CPNE1-221ENST00000462352 ZBTB8OSQ8IWT0 167 aa13.02□□□□□ -0.33
CPNE1-221ENST00000462352 MYCT1Q8N699 235 aa13.02□□□□□ -0.33
CPNE1-221ENST00000462352 SPIRE2Q8WWL2 714 aa13.02□□□□□ -0.33
CPNE1-221ENST00000462352 NTPCRQ9BSD7 190 aaKnown RBP13.02□□□□□ -0.33
CPNE1-221ENST00000462352 C2orf40Q9H1Z8 148 aa13.02□□□□□ -0.33
CPNE1-221ENST00000462352 BLZF1Q9H2G9 400 aa13.02□□□□□ -0.33
CPNE1-221ENST00000462352 TMX1Q9H3N1 280 aa13.02□□□□□ -0.33
CPNE1-221ENST00000462352 KMT5AQ9NQR1 393 aa13.02□□□□□ -0.33
CPNE1-221ENST00000462352 LMBRD1Q9NUN5 540 aa13.02□□□□□ -0.33
CPNE1-221ENST00000462352 RNF216Q9NWF9 866 aaPredicted RBP13.02□□□□□ -0.33
CPNE1-221ENST00000462352 KCNG1Q9UIX4 513 aa13.02□□□□□ -0.33
CPNE1-221ENST00000462352 FRMD3A2A2Y4 597 aa13.01□□□□□ -0.33
CPNE1-221ENST00000462352 GOLGA6L22H0YM25 854 aa13.01□□□□□ -0.33
CPNE1-221ENST00000462352 SLC16A4O15374 487 aa13.01□□□□□ -0.33
CPNE1-221ENST00000462352 TRAK2O60296 914 aa13.01□□□□□ -0.33
CPNE1-221ENST00000462352 BAIAP3O94812 1187 aa13.01□□□□□ -0.33
CPNE1-221ENST00000462352 SMTNP53814 917 aa13.01□□□□□ -0.33
CPNE1-221ENST00000462352 NCKAP1LP55160 1127 aa13.01□□□□□ -0.33
CPNE1-221ENST00000462352 ASIC1P78348 528 aa13.01□□□□□ -0.33
CPNE1-221ENST00000462352 CUL4BQ13620 913 aa13.01□□□□□ -0.33
CPNE1-221ENST00000462352 IKBKEQ14164 716 aa13.01□□□□□ -0.33
CPNE1-221ENST00000462352 PCBP1Q15365 356 aaKnown RBP eCLIP13.01□□□□□ -0.331e-8■■■■■ 45.6
CPNE1-221ENST00000462352 SHHQ15465 462 aa13.01□□□□□ -0.33
CPNE1-221ENST00000462352 CATSPER4Q7RTX7 472 aa13.01□□□□□ -0.33
CPNE1-221ENST00000462352 SFR1Q86XK3 245 aa13.01□□□□□ -0.33
CPNE1-221ENST00000462352 FIZ1Q96SL8 496 aa13.01□□□□□ -0.33
CPNE1-221ENST00000462352 FTHL17Q9BXU8 183 aa13.01□□□□□ -0.33
CPNE1-221ENST00000462352 CCDC113Q9H0I3 377 aa13.01□□□□□ -0.33
CPNE1-221ENST00000462352 PRO3102Q9H379 93 aa13.01□□□□□ -0.33
CPNE1-221ENST00000462352 FZD8Q9H461 694 aa13.01□□□□□ -0.33
CPNE1-221ENST00000462352 PANK4Q9NVE7 773 aa13.01□□□□□ -0.33
CPNE1-221ENST00000462352 ARHGAP28Q9P2N2 729 aa13.01□□□□□ -0.33
CPNE1-221ENST00000462352 ABHD14A-ACY1A0A1B0GW23 586 aa13□□□□□ -0.33
CPNE1-221ENST00000462352 ZBBXA8MT70 800 aa13□□□□□ -0.33
CPNE1-221ENST00000462352 GTPBP6O43824 516 aaPredicted RBP13□□□□□ -0.33
CPNE1-221ENST00000462352 MGEA5O60502 916 aa13□□□□□ -0.33
CPNE1-221ENST00000462352 ERLIN2O94905 339 aa13□□□□□ -0.33
CPNE1-221ENST00000462352 MYL1P05976 194 aa13□□□□□ -0.33
CPNE1-221ENST00000462352 PRR29P0C7W0 189 aa13□□□□□ -0.33
CPNE1-221ENST00000462352 GAP43P17677 238 aa13□□□□□ -0.33
CPNE1-221ENST00000462352 EFNA5P52803 228 aa13□□□□□ -0.33
CPNE1-221ENST00000462352 AMHR2Q16671 573 aa13□□□□□ -0.33
CPNE1-221ENST00000462352 HERC4Q5GLZ8 1057 aaPredicted RBP13□□□□□ -0.33
CPNE1-221ENST00000462352 KANK3Q6NY19 840 aa13□□□□□ -0.33
CPNE1-221ENST00000462352 FAM43BQ6ZT52 329 aaPredicted RBP13□□□□□ -0.33
CPNE1-221ENST00000462352 UNC13DQ70J99 1090 aa13□□□□□ -0.33
CPNE1-221ENST00000462352 FAM178BQ8IXR5 827 aa13□□□□□ -0.33
CPNE1-221ENST00000462352 CCDC65Q8IXS2 484 aa13□□□□□ -0.33
CPNE1-221ENST00000462352 TMEM161BQ8NDZ6 487 aa13□□□□□ -0.33
CPNE1-221ENST00000462352 LINC01599Q8WXQ3 324 aa13□□□□□ -0.33
CPNE1-221ENST00000462352 HERVK_113Q902F9 699 aa13□□□□□ -0.33
CPNE1-221ENST00000462352 CCDC34Q96HJ3 373 aa13□□□□□ -0.33
CPNE1-221ENST00000462352 TIGD1Q96MW7 591 aa13□□□□□ -0.33
CPNE1-221ENST00000462352 PRMT7Q9NVM4 692 aaPredicted RBP13□□□□□ -0.33
CPNE1-221ENST00000462352 DACT1Q9NYF0 836 aa13□□□□□ -0.33
CPNE1-221ENST00000462352 CXXC1Q9P0U4 656 aaPredicted RBP13□□□□□ -0.33
CPNE1-221ENST00000462352 SEL1LQ9UBV2 794 aa13□□□□□ -0.33
CPNE1-221ENST00000462352 MYH11P35749 1972 aa13□□□□□ -0.33
CPNE1-221ENST00000462352 PHLPP2Q6ZVD8 1323 aa12.99□□□□□ -0.33
CPNE1-221ENST00000462352 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.99□□□□□ -0.33
CPNE1-221ENST00000462352 PVALEFA0A1B0GWK0 134 aa12.99□□□□□ -0.33
CPNE1-221ENST00000462352 DENND3A2RUS2 1198 aa12.99□□□□□ -0.33
CPNE1-221ENST00000462352 H0YCG3 227 aa12.99□□□□□ -0.33
CPNE1-221ENST00000462352 K7ENM7 598 aa12.99□□□□□ -0.33
CPNE1-221ENST00000462352 K7ERI5 159 aa12.99□□□□□ -0.33
CPNE1-221ENST00000462352 B4GALT5O43286 388 aa12.99□□□□□ -0.33
CPNE1-221ENST00000462352 TSPAN1O60635 241 aa12.99□□□□□ -0.33
CPNE1-221ENST00000462352 KINO60870 393 aaKnown RBP12.99□□□□□ -0.33
CPNE1-221ENST00000462352 EFCAB14O75071 495 aa12.99□□□□□ -0.33
CPNE1-221ENST00000462352 PRKCBP05771 671 aa12.99□□□□□ -0.33
CPNE1-221ENST00000462352 MAPTP10636 758 aaKnown RBP12.99□□□□□ -0.33
CPNE1-221ENST00000462352 ZSCAN20P17040 1043 aaPredicted RBP12.99□□□□□ -0.33
CPNE1-221ENST00000462352 NMT1P30419 496 aaKnown RBP12.99□□□□□ -0.33
CPNE1-221ENST00000462352 WDR5P61964 334 aaKnown RBP12.99□□□□□ -0.33
CPNE1-221ENST00000462352 COASYQ13057 564 aa12.99□□□□□ -0.33
CPNE1-221ENST00000462352 DSC3Q14574 896 aa12.99□□□□□ -0.33
CPNE1-221ENST00000462352 MAPK6Q16659 721 aa12.99□□□□□ -0.33
CPNE1-221ENST00000462352 FAM187BQ17R55 369 aa12.99□□□□□ -0.33
CPNE1-221ENST00000462352 RASIP1Q5U651 963 aa12.99□□□□□ -0.33
CPNE1-221ENST00000462352 TAS1R3Q7RTX0 852 aa12.99□□□□□ -0.33
CPNE1-221ENST00000462352 HAUS6Q7Z4H7 955 aa12.99□□□□□ -0.33
CPNE1-221ENST00000462352 RTN4RL1Q86UN2 441 aaPredicted RBP12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms