RNA–Protein interactions for RNA: ENST00000462289.1

VPS36-202, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 2

Gene VPS36, Length 544 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-202ENST00000462289 COL20A1Q9P218 1284 aa6.62□□□□□ -1.35
VPS36-202ENST00000462289 CCPG1Q9ULG6 757 aa6.62□□□□□ -1.35
VPS36-202ENST00000462289 DOCK5Q9H7D0 1870 aa6.62□□□□□ -1.35
VPS36-202ENST00000462289 KRTAP4-8A0A0G2JLE6 195 aa6.61□□□□□ -1.35
VPS36-202ENST00000462289 GOLGA8BA8MQT2 603 aa6.61□□□□□ -1.35
VPS36-202ENST00000462289 STXBP3O00186 592 aa6.61□□□□□ -1.35
VPS36-202ENST00000462289 NDUFB5O43674 189 aa6.61□□□□□ -1.35
VPS36-202ENST00000462289 CPNE3O75131 537 aaKnown RBP6.61□□□□□ -1.35
VPS36-202ENST00000462289 LARGE1O95461 756 aa6.61□□□□□ -1.35
VPS36-202ENST00000462289 ECEL1O95672 775 aa6.61□□□□□ -1.35
VPS36-202ENST00000462289 GJB1P08034 283 aa6.61□□□□□ -1.35
VPS36-202ENST00000462289 METAP2P50579 478 aaKnown RBP eCLIP6.61□□□□□ -1.35
VPS36-202ENST00000462289 SNAP25P60880 206 aa6.61□□□□□ -1.35
VPS36-202ENST00000462289 CNTN2Q02246 1040 aa6.61□□□□□ -1.35
VPS36-202ENST00000462289 CACNB2Q08289 660 aaPredicted RBP6.61□□□□□ -1.35
VPS36-202ENST00000462289 SCRN1Q12765 414 aa6.61□□□□□ -1.35
VPS36-202ENST00000462289 MAP7Q14244 749 aa6.61□□□□□ -1.35
VPS36-202ENST00000462289 KCTD2Q14681 263 aa6.61□□□□□ -1.35
VPS36-202ENST00000462289 WWC2Q6AWC2 1192 aa6.61□□□□□ -1.35
VPS36-202ENST00000462289 SEZ6L2Q6UXD5 910 aa6.61□□□□□ -1.35
VPS36-202ENST00000462289 SLC30A10Q6XR72 485 aa6.61□□□□□ -1.35
VPS36-202ENST00000462289 CPXCR1Q8N123 301 aa6.61□□□□□ -1.35
VPS36-202ENST00000462289 SMARCC2Q8TAQ2 1214 aa6.61□□□□□ -1.35
VPS36-202ENST00000462289 SYTL5Q8TDW5 730 aaPredicted RBP6.61□□□□□ -1.35
VPS36-202ENST00000462289 TBC1D5Q92609 795 aa6.61□□□□□ -1.35
VPS36-202ENST00000462289 GTF3C6Q969F1 213 aa6.61□□□□□ -1.35
VPS36-202ENST00000462289 MMP19Q99542 508 aa6.61□□□□□ -1.35
VPS36-202ENST00000462289 TINF2Q9BSI4 451 aa6.61□□□□□ -1.35
VPS36-202ENST00000462289 ZMYND12Q9H0C1 365 aa6.61□□□□□ -1.35
VPS36-202ENST00000462289 SEMA6CQ9H3T2 930 aa6.61□□□□□ -1.35
VPS36-202ENST00000462289 NPHS2Q9NP85 383 aa6.61□□□□□ -1.35
VPS36-202ENST00000462289 SH3GLB2Q9NR46 395 aa6.61□□□□□ -1.35
VPS36-202ENST00000462289 BARHL2Q9NY43 387 aa6.61□□□□□ -1.35
VPS36-202ENST00000462289 MRPL11Q9Y3B7 192 aaKnown RBP6.61□□□□□ -1.35
VPS36-202ENST00000462289 PCDHA1Q9Y5I3 950 aa6.61□□□□□ -1.35
VPS36-202ENST00000462289 IVNS1ABPQ9Y6Y0 642 aa6.61□□□□□ -1.35
VPS36-202ENST00000462289 RANBP2P49792 3224 aaKnown RBP6.61□□□□□ -1.35
VPS36-202ENST00000462289 GOLGA8AA7E2F4 631 aa6.6□□□□□ -1.35
VPS36-202ENST00000462289 CTAGE5O15320 804 aa6.6□□□□□ -1.35
VPS36-202ENST00000462289 EDIL3O43854 480 aa6.6□□□□□ -1.35
VPS36-202ENST00000462289 PGK2P07205 417 aa6.6□□□□□ -1.35
VPS36-202ENST00000462289 ALAS1P13196 640 aa6.6□□□□□ -1.35
VPS36-202ENST00000462289 SCG2P13521 617 aa6.6□□□□□ -1.35
VPS36-202ENST00000462289 FDPSP14324 419 aaKnown RBP6.6□□□□□ -1.35
VPS36-202ENST00000462289 GJA8P48165 433 aa6.6□□□□□ -1.35
VPS36-202ENST00000462289 ALDH5A1P51649 535 aaPredicted RBP6.6□□□□□ -1.35
VPS36-202ENST00000462289 NEK4P51957 841 aa6.6□□□□□ -1.35
VPS36-202ENST00000462289 ORC1Q13415 861 aa6.6□□□□□ -1.35
VPS36-202ENST00000462289 BAATQ14032 418 aaPredicted RBP6.6□□□□□ -1.35
VPS36-202ENST00000462289 PLS1Q14651 629 aa6.6□□□□□ -1.35
VPS36-202ENST00000462289 SLC9C1Q4G0N8 1177 aa6.6□□□□□ -1.35
VPS36-202ENST00000462289 TAPT1Q6NXT6 567 aa6.6□□□□□ -1.35
VPS36-202ENST00000462289 CCDC174Q6PII3 467 aa6.6□□□□□ -1.35
VPS36-202ENST00000462289 CBLL1Q75N03 491 aa6.6□□□□□ -1.35
VPS36-202ENST00000462289 VSIG10LQ86VR7 867 aa6.6□□□□□ -1.35
VPS36-202ENST00000462289 MCF2L2Q86YR7 1114 aa6.6□□□□□ -1.35
VPS36-202ENST00000462289 ABI1Q8IZP0 508 aa6.6□□□□□ -1.35
VPS36-202ENST00000462289 DAGLBQ8NCG7 672 aa6.6□□□□□ -1.35
VPS36-202ENST00000462289 NSUN7Q8NE18 718 aaKnown RBP6.6□□□□□ -1.35
VPS36-202ENST00000462289 RAET1EQ8TD07 263 aa6.6□□□□□ -1.35
VPS36-202ENST00000462289 NUP133Q8WUM0 1156 aa6.6□□□□□ -1.35
VPS36-202ENST00000462289 RRP36Q96EU6 259 aaKnown RBP6.6□□□□□ -1.35
VPS36-202ENST00000462289 FBXL18Q96ME1 805 aa6.6□□□□□ -1.35
VPS36-202ENST00000462289 IWS1Q96ST2 819 aa6.6□□□□□ -1.35
VPS36-202ENST00000462289 CORO1BQ9BR76 489 aa6.6□□□□□ -1.35
VPS36-202ENST00000462289 DNAJC25Q9H1X3 360 aa6.6□□□□□ -1.35
VPS36-202ENST00000462289 NCOA5Q9HCD5 579 aaKnown RBP6.6□□□□□ -1.35
VPS36-202ENST00000462289 ABCB6Q9NP58 842 aa6.6□□□□□ -1.35
VPS36-202ENST00000462289 FAM105AQ9NUU6 356 aa6.6□□□□□ -1.35
VPS36-202ENST00000462289 SLC5A4Q9NY91 659 aa6.6□□□□□ -1.35
VPS36-202ENST00000462289 OGDHLQ9ULD0 1010 aa6.6□□□□□ -1.35
VPS36-202ENST00000462289 LIMCH1Q9UPQ0 1083 aa6.6□□□□□ -1.35
VPS36-202ENST00000462289 ASB14A6NK59 587 aa6.59□□□□□ -1.35
VPS36-202ENST00000462289 FAM170BA6NMN3 283 aa6.59□□□□□ -1.35
VPS36-202ENST00000462289 ADAMTS3O15072 1205 aa6.59□□□□□ -1.35
VPS36-202ENST00000462289 CYP26A1O43174 497 aa6.59□□□□□ -1.35
VPS36-202ENST00000462289 SEPT4O43236 478 aa6.59□□□□□ -1.35
VPS36-202ENST00000462289 ADCY6O43306 1168 aa6.59□□□□□ -1.35
VPS36-202ENST00000462289 MSCO60682 206 aa6.59□□□□□ -1.35
VPS36-202ENST00000462289 NFICP08651 508 aa6.59□□□□□ -1.35
VPS36-202ENST00000462289 COL6A1P12109 1028 aa6.59□□□□□ -1.35
VPS36-202ENST00000462289 CYP2B6P20813 491 aa6.59□□□□□ -1.35
VPS36-202ENST00000462289 CST5P28325 142 aaPredicted RBP6.59□□□□□ -1.35
VPS36-202ENST00000462289 IKQ13123 557 aaPredicted RBP6.59□□□□□ -1.35
VPS36-202ENST00000462289 CUL4AQ13619 759 aa6.59□□□□□ -1.35
VPS36-202ENST00000462289 RPS26P11Q5JNZ5 115 aaPredicted RBP6.59□□□□□ -1.35
VPS36-202ENST00000462289 CCSAPQ6IQ19 270 aaPredicted RBP6.59□□□□□ -1.35
VPS36-202ENST00000462289 XRRA1Q6P2D8 792 aa6.59□□□□□ -1.35
VPS36-202ENST00000462289 CCDC62Q6P9F0 684 aa6.59□□□□□ -1.35
VPS36-202ENST00000462289 SYNE3Q6ZMZ3 975 aa6.59□□□□□ -1.35
VPS36-202ENST00000462289 RNF207Q6ZRF8 634 aa6.59□□□□□ -1.35
VPS36-202ENST00000462289 ARMCX2Q7L311 632 aa6.59□□□□□ -1.35
VPS36-202ENST00000462289 RAB11FIP4Q86YS3 637 aa6.59□□□□□ -1.35
VPS36-202ENST00000462289 CCDC144CPQ8IYA2 1237 aa6.59□□□□□ -1.35
VPS36-202ENST00000462289 SH3TC2Q8TF17 1288 aa6.59□□□□□ -1.35
VPS36-202ENST00000462289 SNX21Q969T3 373 aa6.59□□□□□ -1.35
VPS36-202ENST00000462289 ZSCAN31Q96LW9 406 aaPredicted RBP6.59□□□□□ -1.35
VPS36-202ENST00000462289 INPP4AQ96PE3 977 aaPredicted RBP6.59□□□□□ -1.35
VPS36-202ENST00000462289 PDCD2LQ9BRP1 358 aa6.59□□□□□ -1.35
VPS36-202ENST00000462289 LLPHQ9BRT6 129 aaKnown RBP6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms