RNA–Protein interactions for RNA: ENST00000462276.1

RTF1-202, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 4

Gene RTF1, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-202ENST00000462276 MYCP01106 439 aaPredicted RBP11.74□□□□□ -0.53
RTF1-202ENST00000462276 COL6A1P12109 1028 aa11.74□□□□□ -0.53
RTF1-202ENST00000462276 PRKCSHP14314 528 aaPredicted RBP11.74□□□□□ -0.53
RTF1-202ENST00000462276 RPL13P26373 211 aaKnown RBP11.74□□□□□ -0.53
RTF1-202ENST00000462276 CRYBB1P53674 252 aaPredicted RBP11.74□□□□□ -0.53
RTF1-202ENST00000462276 TPM4P67936 248 aa11.74□□□□□ -0.53
RTF1-202ENST00000462276 NCBP1Q09161 790 aaKnown RBP11.74□□□□□ -0.53
RTF1-202ENST00000462276 DRP2Q13474 957 aa11.74□□□□□ -0.53
RTF1-202ENST00000462276 CAPSQ13938 189 aa11.74□□□□□ -0.53
RTF1-202ENST00000462276 NFIL3Q16649 462 aa11.74□□□□□ -0.53
RTF1-202ENST00000462276 MAPK6Q16659 721 aa11.74□□□□□ -0.53
RTF1-202ENST00000462276 FAM187BQ17R55 369 aa11.74□□□□□ -0.53
RTF1-202ENST00000462276 EDRF1Q3B7T1 1238 aa11.74□□□□□ -0.53
RTF1-202ENST00000462276 ANKRD33Q7Z3H0 272 aa11.74□□□□□ -0.53
RTF1-202ENST00000462276 CCDC155Q8N6L0 562 aa11.74□□□□□ -0.53
RTF1-202ENST00000462276 NOC3LQ8WTT2 800 aaKnown RBP11.74□□□□□ -0.53
RTF1-202ENST00000462276 P2RX5Q93086 422 aa11.74□□□□□ -0.53
RTF1-202ENST00000462276 PRIMPOLQ96LW4 560 aa11.74□□□□□ -0.53
RTF1-202ENST00000462276 GBP3Q9H0R5 595 aa11.74□□□□□ -0.53
RTF1-202ENST00000462276 DNAJC25Q9H1X3 360 aa11.74□□□□□ -0.53
RTF1-202ENST00000462276 TBC1D7Q9P0N9 293 aa11.74□□□□□ -0.53
RTF1-202ENST00000462276 TBX20Q9UMR3 447 aa11.74□□□□□ -0.53
RTF1-202ENST00000462276 TRAF3IP3Q9Y228 551 aa11.74□□□□□ -0.53
RTF1-202ENST00000462276 SQORQ9Y6N5 450 aa11.74□□□□□ -0.53
RTF1-202ENST00000462276 ACKR2O00590 384 aa11.73□□□□□ -0.53
RTF1-202ENST00000462276 KIAA0391O15091 583 aaKnown RBP11.73□□□□□ -0.53
RTF1-202ENST00000462276 CALUO43852 315 aaPredicted RBP11.73□□□□□ -0.53
RTF1-202ENST00000462276 PIGRP01833 764 aa11.73□□□□□ -0.53
RTF1-202ENST00000462276 SRGAP2CP0DJJ0 459 aa11.73□□□□□ -0.53
RTF1-202ENST00000462276 NMT1P30419 496 aaKnown RBP11.73□□□□□ -0.53
RTF1-202ENST00000462276 GPC3P51654 580 aa11.73□□□□□ -0.53
RTF1-202ENST00000462276 SOX10P56693 466 aa11.73□□□□□ -0.53
RTF1-202ENST00000462276 NLRP11P59045 1033 aaKnown RBP11.73□□□□□ -0.53
RTF1-202ENST00000462276 FKBP3Q00688 224 aaKnown RBP11.73□□□□□ -0.53
RTF1-202ENST00000462276 MYL5Q02045 173 aa11.73□□□□□ -0.53
RTF1-202ENST00000462276 RBL2Q08999 1139 aa11.73□□□□□ -0.53
RTF1-202ENST00000462276 SNX17Q15036 470 aa11.73□□□□□ -0.53
RTF1-202ENST00000462276 SPATA1Q5VX52 437 aa11.73□□□□□ -0.53
RTF1-202ENST00000462276 SLFN12LQ6IEE8 588 aa11.73□□□□□ -0.53
RTF1-202ENST00000462276 ZPBP2Q6X784 338 aa11.73□□□□□ -0.53
RTF1-202ENST00000462276 NECAB2Q7Z6G3 386 aa11.73□□□□□ -0.53
RTF1-202ENST00000462276 MAP4K3Q8IVH8 894 aa11.73□□□□□ -0.53
RTF1-202ENST00000462276 SMYD4Q8IYR2 804 aaPredicted RBP11.73□□□□□ -0.53
RTF1-202ENST00000462276 SYCP3Q8IZU3 236 aa11.73□□□□□ -0.53
RTF1-202ENST00000462276 USP38Q8NB14 1042 aa11.73□□□□□ -0.53
RTF1-202ENST00000462276 CAGE1Q8TC20 777 aa11.73□□□□□ -0.53
RTF1-202ENST00000462276 DNAJB3Q8WWF6 145 aa11.73□□□□□ -0.53
RTF1-202ENST00000462276 NELFBQ8WX92 580 aa11.73□□□□□ -0.53
RTF1-202ENST00000462276 NLRP7Q8WX94 980 aa11.73□□□□□ -0.53
RTF1-202ENST00000462276 BSNDQ8WZ55 320 aa11.73□□□□□ -0.53
RTF1-202ENST00000462276 HPS3Q969F9 1004 aa11.73□□□□□ -0.53
RTF1-202ENST00000462276 SCLT1Q96NL6 688 aa11.73□□□□□ -0.53
RTF1-202ENST00000462276 SENP6Q9GZR1 1112 aaPredicted RBP11.73□□□□□ -0.53
RTF1-202ENST00000462276 ADAMTS10Q9H324 1103 aa11.73□□□□□ -0.53
RTF1-202ENST00000462276 FZD8Q9H461 694 aa11.73□□□□□ -0.53
RTF1-202ENST00000462276 POLD4Q9HCU8 107 aa11.73□□□□□ -0.53
RTF1-202ENST00000462276 TYW1Q9NV66 732 aaKnown RBP11.73□□□□□ -0.53
RTF1-202ENST00000462276 PRMT7Q9NVM4 692 aaPredicted RBP11.73□□□□□ -0.53
RTF1-202ENST00000462276 CCDC85CA6NKD9 419 aa11.72□□□□□ -0.53
RTF1-202ENST00000462276 DCDC2CA8MYV0 355 aa11.72□□□□□ -0.53
RTF1-202ENST00000462276 GOLGA6L19H0YKK7 550 aa11.72□□□□□ -0.53
RTF1-202ENST00000462276 GPR32O75388 356 aa11.72□□□□□ -0.53
RTF1-202ENST00000462276 PRPF6O94906 941 aaKnown RBP11.72□□□□□ -0.53
RTF1-202ENST00000462276 PARNO95453 639 aaKnown RBP11.72□□□□□ -0.53
RTF1-202ENST00000462276 GNA14O95837 355 aa11.72□□□□□ -0.53
RTF1-202ENST00000462276 VTNP04004 478 aa11.72□□□□□ -0.53
RTF1-202ENST00000462276 MYBP10242 640 aa11.72□□□□□ -0.53
RTF1-202ENST00000462276 CD44P16070 742 aaKnown RBP11.72□□□□□ -0.53
RTF1-202ENST00000462276 EIF4BP23588 611 aaKnown RBP11.72□□□□□ -0.53
RTF1-202ENST00000462276 MNX1P50219 401 aaPredicted RBP11.72□□□□□ -0.53
RTF1-202ENST00000462276 CASP5P51878 434 aa11.72□□□□□ -0.53
RTF1-202ENST00000462276 MRPS6P82932 125 aaKnown RBP11.72□□□□□ -0.53
RTF1-202ENST00000462276 ZNF200P98182 395 aaPredicted RBP11.72□□□□□ -0.53
RTF1-202ENST00000462276 BFSP2Q13515 415 aa11.72□□□□□ -0.53
RTF1-202ENST00000462276 HIC1Q14526 733 aa11.72□□□□□ -0.53
RTF1-202ENST00000462276 UVSSAQ2YD98 709 aa11.72□□□□□ -0.53
RTF1-202ENST00000462276 FAM26DQ5JW98 314 aa11.72□□□□□ -0.53
RTF1-202ENST00000462276 KLHL10Q6JEL2 608 aa11.72□□□□□ -0.53
RTF1-202ENST00000462276 SLC39A5Q6ZMH5 540 aa11.72□□□□□ -0.53
RTF1-202ENST00000462276 RUFY4Q6ZNE9 571 aa11.72□□□□□ -0.53
RTF1-202ENST00000462276 APBB1IPQ7Z5R6 666 aaPredicted RBP11.72□□□□□ -0.53
RTF1-202ENST00000462276 SLC9A9Q8IVB4 645 aa11.72□□□□□ -0.53
RTF1-202ENST00000462276 C12orf56Q8IXR9 622 aa11.72□□□□□ -0.53
RTF1-202ENST00000462276 NLRP4Q96MN2 994 aa11.72□□□□□ -0.53
RTF1-202ENST00000462276 CEP63Q96MT8 703 aa11.72□□□□□ -0.53
RTF1-202ENST00000462276 MRPL4Q9BYD3 311 aaKnown RBP11.72□□□□□ -0.53
RTF1-202ENST00000462276 CELF4Q9BZC1 486 aaKnown RBP11.72□□□□□ -0.53
RTF1-202ENST00000462276 FAM49AQ9H0Q0 323 aaPredicted RBP11.72□□□□□ -0.53
RTF1-202ENST00000462276 KCTD10Q9H3F6 313 aa11.72□□□□□ -0.53
RTF1-202ENST00000462276 C11orf49Q9H6J7 331 aa11.72□□□□□ -0.53
RTF1-202ENST00000462276 IFT122Q9HBG6 1241 aa11.72□□□□□ -0.53
RTF1-202ENST00000462276 MAPK8IP1Q9UQF2 711 aa11.72□□□□□ -0.53
RTF1-202ENST00000462276 SCN10AQ9Y5Y9 1956 aa11.72□□□□□ -0.53
RTF1-202ENST00000462276 MYH9P35579 1960 aaKnown RBP11.71□□□□□ -0.53
RTF1-202ENST00000462276 CENPFP49454 3210 aa11.71□□□□□ -0.53
RTF1-202ENST00000462276 LOXHD1Q8IVV2 1947 aa11.71□□□□□ -0.53
RTF1-202ENST00000462276 A0A087WZ62 844 aa11.71□□□□□ -0.53
RTF1-202ENST00000462276 INO80B-WBP1J3KQ70 363 aa11.71□□□□□ -0.53
RTF1-202ENST00000462276 CETN3O15182 167 aa11.71□□□□□ -0.53
RTF1-202ENST00000462276 CD4P01730 458 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms