RNA–Protein interactions for RNA: ENST00000461874.1

VARS-220, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 845 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-220ENST00000461874 PUF60Q9UHX1 559 aaKnown RBP21.14■□□□□ 0.97
VARS-220ENST00000461874 MCM7P33993 719 aa21.13■□□□□ 0.97
VARS-220ENST00000461874 PPM1AP35813 382 aa21.13■□□□□ 0.97
VARS-220ENST00000461874 PBX3P40426 434 aa21.13■□□□□ 0.97
VARS-220ENST00000461874 NDUFV1P49821 464 aa21.13■□□□□ 0.97
VARS-220ENST00000461874 RAB27AP51159 221 aa21.13■□□□□ 0.97
VARS-220ENST00000461874 HMGN5P82970 282 aaKnown RBP21.13■□□□□ 0.97
VARS-220ENST00000461874 FBXO18Q8NFZ0 1043 aa21.13■□□□□ 0.97
VARS-220ENST00000461874 RSPH1Q8WYR4 309 aa21.13■□□□□ 0.97
VARS-220ENST00000461874 MSLNLQ96KJ4 702 aa21.13■□□□□ 0.97
VARS-220ENST00000461874 MTRQ99707 1265 aa21.13■□□□□ 0.97
VARS-220ENST00000461874 FOXP1Q9H334 677 aaPredicted RBP21.13■□□□□ 0.97
VARS-220ENST00000461874 XPNPEP1Q9NQW7 623 aa21.13■□□□□ 0.97
VARS-220ENST00000461874 AGPAT5Q9NUQ2 364 aa21.13■□□□□ 0.97
VARS-220ENST00000461874 SPG21Q9NZD8 308 aa21.13■□□□□ 0.97
VARS-220ENST00000461874 CLEC1BQ9P126 229 aa21.13■□□□□ 0.97
VARS-220ENST00000461874 PRKAG3Q9UGI9 489 aa21.13■□□□□ 0.97
VARS-220ENST00000461874 CD207Q9UJ71 328 aa21.13■□□□□ 0.97
VARS-220ENST00000461874 MBTPS2O43462 519 aa21.12■□□□□ 0.97
VARS-220ENST00000461874 SSTR3P32745 418 aaPredicted RBP21.12■□□□□ 0.97
VARS-220ENST00000461874 KRT17Q04695 432 aa21.12■□□□□ 0.97
VARS-220ENST00000461874 SMAD4Q13485 552 aaKnown RBP21.12■□□□□ 0.97
VARS-220ENST00000461874 SMAD2Q15796 467 aaKnown RBP21.12■□□□□ 0.97
VARS-220ENST00000461874 RNF149Q8NC42 400 aa21.12■□□□□ 0.97
VARS-220ENST00000461874 LPPQ93052 612 aa21.12■□□□□ 0.97
VARS-220ENST00000461874 POTEMA6NI47 508 aa21.11■□□□□ 0.97
VARS-220ENST00000461874 PER2O15055 1255 aa21.11■□□□□ 0.97
VARS-220ENST00000461874 DGAT1O75907 488 aa21.11■□□□□ 0.97
VARS-220ENST00000461874 GLP2RO95838 553 aa21.11■□□□□ 0.97
VARS-220ENST00000461874 XRCC6P12956 609 aaKnown RBP eCLIP21.11■□□□□ 0.978e-6■■□□□ 12.6
VARS-220ENST00000461874 HOXA11P31270 313 aaPredicted RBP21.11■□□□□ 0.97
VARS-220ENST00000461874 RBM25P49756 843 aaKnown RBP21.11■□□□□ 0.97
VARS-220ENST00000461874 ZP2Q05996 745 aa21.11■□□□□ 0.97
VARS-220ENST00000461874 MXD4Q14582 209 aaPredicted RBP21.11■□□□□ 0.97
VARS-220ENST00000461874 LONRF3Q496Y0 759 aa21.11■□□□□ 0.97
VARS-220ENST00000461874 SLC39A11Q8N1S5 342 aa21.11■□□□□ 0.97
VARS-220ENST00000461874 CDCA3Q99618 268 aaPredicted RBP21.11■□□□□ 0.97
VARS-220ENST00000461874 PCDHB2Q9Y5E7 798 aa21.11■□□□□ 0.97
VARS-220ENST00000461874 PLXNA4Q9HCM2 1894 aa21.11■□□□□ 0.97
VARS-220ENST00000461874 MEIS3P2A8K0S8 358 aa21.1■□□□□ 0.97
VARS-220ENST00000461874 PI4K2BG5E9Z4 385 aa21.1■□□□□ 0.97
VARS-220ENST00000461874 EYA4O95677 639 aa21.1■□□□□ 0.97
VARS-220ENST00000461874 SPATA31C1P0DKV0 1188 aa21.1■□□□□ 0.97
VARS-220ENST00000461874 RARRES1P49788 294 aa21.1■□□□□ 0.97
VARS-220ENST00000461874 PTENP60484 403 aa21.1■□□□□ 0.97
VARS-220ENST00000461874 COASYQ13057 564 aa21.1■□□□□ 0.97
VARS-220ENST00000461874 ORC2Q13416 577 aaPredicted RBP21.1■□□□□ 0.97
VARS-220ENST00000461874 ZNF174Q15697 407 aa21.1■□□□□ 0.97
VARS-220ENST00000461874 DUSP6Q16828 381 aa21.1■□□□□ 0.97
VARS-220ENST00000461874 PLPP4Q5VZY2 271 aa21.1■□□□□ 0.97
VARS-220ENST00000461874 GLB1LQ6UWU2 654 aa21.1■□□□□ 0.97
VARS-220ENST00000461874 ADHFE1Q8IWW8 467 aa21.1■□□□□ 0.97
VARS-220ENST00000461874 FAM184AQ8NB25 1140 aa21.1■□□□□ 0.97
VARS-220ENST00000461874 PIGOQ8TEQ8 1089 aa21.1■□□□□ 0.97
VARS-220ENST00000461874 TCF25Q9BQ70 676 aa21.1■□□□□ 0.97
VARS-220ENST00000461874 NGRNQ9NPE2 291 aaKnown RBP21.1■□□□□ 0.97
VARS-220ENST00000461874 A0A087WWV3 80 aa21.09■□□□□ 0.97
VARS-220ENST00000461874 FSD2A1L4K1 749 aa21.09■□□□□ 0.97
VARS-220ENST00000461874 C19orf67A6NJJ6 358 aa21.09■□□□□ 0.97
VARS-220ENST00000461874 OFD1O75665 1012 aa21.09■□□□□ 0.97
VARS-220ENST00000461874 ARL2P36404 184 aa21.09■□□□□ 0.97
VARS-220ENST00000461874 ALDH7A1P49419 539 aaKnown RBP21.09■□□□□ 0.97
VARS-220ENST00000461874 BCAR1P56945 870 aa21.09■□□□□ 0.97
VARS-220ENST00000461874 POU5F1BQ06416 359 aa21.09■□□□□ 0.97
VARS-220ENST00000461874 NOMO2Q5JPE7 1267 aa21.09■□□□□ 0.97
VARS-220ENST00000461874 UBXN11Q5T124 520 aa21.09■□□□□ 0.97
VARS-220ENST00000461874 MRPL10Q7Z7H8 261 aaKnown RBP21.09■□□□□ 0.97
VARS-220ENST00000461874 NOSTRINQ8IVI9 506 aa21.09■□□□□ 0.97
VARS-220ENST00000461874 VN1R2Q8NFZ6 395 aa21.09■□□□□ 0.97
VARS-220ENST00000461874 PGBD4Q96DM1 585 aa21.09■□□□□ 0.97
VARS-220ENST00000461874 CCDC43Q96MW1 224 aaKnown RBP21.09■□□□□ 0.97
VARS-220ENST00000461874 ENTPD7Q9NQZ7 604 aa21.09■□□□□ 0.97
VARS-220ENST00000461874 TBC1D13Q9NVG8 400 aa21.09■□□□□ 0.97
VARS-220ENST00000461874 BARX2Q9UMQ3 279 aaPredicted RBP21.09■□□□□ 0.97
VARS-220ENST00000461874 COL9A1P20849 921 aa21.08■□□□□ 0.97
VARS-220ENST00000461874 TFDP1Q14186 410 aa21.08■□□□□ 0.97
VARS-220ENST00000461874 PCBP1Q15365 356 aaKnown RBP eCLIP21.08■□□□□ 0.976e-7■■■■□ 21.8
VARS-220ENST00000461874 CATSPER3Q86XQ3 398 aa21.08■□□□□ 0.97
VARS-220ENST00000461874 IFNLR1Q8IU57 520 aaPredicted RBP21.08■□□□□ 0.97
VARS-220ENST00000461874 SMRP1Q8NCR6 262 aa21.08■□□□□ 0.97
VARS-220ENST00000461874 ASAP3Q8TDY4 903 aa21.08■□□□□ 0.97
VARS-220ENST00000461874 TUFT1Q9NNX1 390 aa21.08■□□□□ 0.97
VARS-220ENST00000461874 INPP5FQ9Y2H2 1132 aa21.08■□□□□ 0.97
VARS-220ENST00000461874 HIDE1A8MVS5 230 aa21.07■□□□□ 0.96
VARS-220ENST00000461874 NT5C1B-RDH14C9J2C7 533 aa21.07■□□□□ 0.96
VARS-220ENST00000461874 ERLIN2O94905 339 aa21.07■□□□□ 0.96
VARS-220ENST00000461874 OR52Z1P0C646 297 aa21.07■□□□□ 0.96
VARS-220ENST00000461874 TECP42680 631 aa21.07■□□□□ 0.96
VARS-220ENST00000461874 TRAPPC10P48553 1259 aa21.07■□□□□ 0.96
VARS-220ENST00000461874 RBM10P98175 930 aaKnown RBP21.07■□□□□ 0.96
VARS-220ENST00000461874 RABEP1Q15276 862 aa21.07■□□□□ 0.96
VARS-220ENST00000461874 TTC38Q5R3I4 469 aa21.07■□□□□ 0.96
VARS-220ENST00000461874 AGMOQ6ZNB7 445 aa21.07■□□□□ 0.96
VARS-220ENST00000461874 TMC7Q7Z402 723 aa21.07■□□□□ 0.96
VARS-220ENST00000461874 POLR3CQ9BUI4 534 aaPredicted RBP21.07■□□□□ 0.96
VARS-220ENST00000461874 NRDE2Q9H7Z3 1164 aa21.07■□□□□ 0.96
VARS-220ENST00000461874 CARNS1A5YM72 827 aa21.06■□□□□ 0.96
VARS-220ENST00000461874 TSPAN1O60635 241 aa21.06■□□□□ 0.96
VARS-220ENST00000461874 ZC3H11AO75152 810 aaKnown RBP eCLIP21.06■□□□□ 0.96
VARS-220ENST00000461874 MED24O75448 989 aa21.06■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms