RNA–Protein interactions for RNA: ENST00000461869.5

SF3A3-203, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 3

Gene SF3A3, Length 776 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-203ENST00000461869 TMEM184AQ6ZMB5 413 aa17.32■□□□□ 0.36
SF3A3-203ENST00000461869 NIPA1Q7RTP0 329 aa17.32■□□□□ 0.36
SF3A3-203ENST00000461869 FAM228AQ86W67 206 aa17.32■□□□□ 0.36
SF3A3-203ENST00000461869 CCDC60Q8IWA6 550 aaPredicted RBP17.32■□□□□ 0.36
SF3A3-203ENST00000461869 CKAP2LQ8IYA6 745 aa17.32■□□□□ 0.36
SF3A3-203ENST00000461869 ZNF579Q8NAF0 562 aaKnown RBP17.32■□□□□ 0.36
SF3A3-203ENST00000461869 OSMRQ99650 979 aa17.32■□□□□ 0.36
SF3A3-203ENST00000461869 S1PR5Q9H228 398 aa17.32■□□□□ 0.36
SF3A3-203ENST00000461869 ELAC1Q9H777 363 aaKnown RBP17.32■□□□□ 0.36
SF3A3-203ENST00000461869 DDX19AQ9NUU7 478 aaKnown RBP17.32■□□□□ 0.36
SF3A3-203ENST00000461869 PUF60Q9UHX1 559 aaKnown RBP17.32■□□□□ 0.36
SF3A3-203ENST00000461869 LZTS1Q9Y250 596 aa17.32■□□□□ 0.36
SF3A3-203ENST00000461869 ZBTB42B2RXF5 422 aa17.31■□□□□ 0.36
SF3A3-203ENST00000461869 NEMFO60524 1076 aa17.31■□□□□ 0.36
SF3A3-203ENST00000461869 CMA1P23946 247 aa17.31■□□□□ 0.36
SF3A3-203ENST00000461869 PRPHP41219 470 aa17.31■□□□□ 0.36
SF3A3-203ENST00000461869 PLCB3Q01970 1234 aa17.31■□□□□ 0.36
SF3A3-203ENST00000461869 PTGDRQ13258 359 aa17.31■□□□□ 0.36
SF3A3-203ENST00000461869 KCNC3Q14003 757 aa17.31■□□□□ 0.36
SF3A3-203ENST00000461869 PTPN21Q16825 1174 aa17.31■□□□□ 0.36
SF3A3-203ENST00000461869 ANKRD54Q6NXT1 300 aa17.31■□□□□ 0.36
SF3A3-203ENST00000461869 PLA2G4DQ86XP0 818 aa17.31■□□□□ 0.36
SF3A3-203ENST00000461869 METTL13Q8N6R0 699 aa17.31■□□□□ 0.36
SF3A3-203ENST00000461869 FSIP1Q8NA03 581 aa17.31■□□□□ 0.36
SF3A3-203ENST00000461869 ASIC4Q96FT7 647 aa17.31■□□□□ 0.36
SF3A3-203ENST00000461869 TCF25Q9BQ70 676 aa17.31■□□□□ 0.36
SF3A3-203ENST00000461869 APOL5Q9BWW9 433 aa17.31■□□□□ 0.36
SF3A3-203ENST00000461869 FBXO2Q9UK22 296 aaPredicted RBP17.31■□□□□ 0.36
SF3A3-203ENST00000461869 FAM86B1E9PN63 330 aa17.3■□□□□ 0.36
SF3A3-203ENST00000461869 GPR32O75388 356 aa17.3■□□□□ 0.36
SF3A3-203ENST00000461869 C22orf31O95567 290 aa17.3■□□□□ 0.36
SF3A3-203ENST00000461869 VTNP04004 478 aa17.3■□□□□ 0.36
SF3A3-203ENST00000461869 FAM86B2P0C5J1 330 aa17.3■□□□□ 0.36
SF3A3-203ENST00000461869 ATP4AP20648 1035 aa17.3■□□□□ 0.36
SF3A3-203ENST00000461869 VCPP55072 806 aaKnown RBP17.3■□□□□ 0.36
SF3A3-203ENST00000461869 FAM160A1Q05DH4 1040 aa17.3■□□□□ 0.36
SF3A3-203ENST00000461869 AXDND1Q5T1B0 1012 aaPredicted RBP17.3■□□□□ 0.36
SF3A3-203ENST00000461869 CAVIN1Q6NZI2 390 aaKnown RBP17.3■□□□□ 0.36
SF3A3-203ENST00000461869 LLGL2Q6P1M3 1020 aa17.3■□□□□ 0.36
SF3A3-203ENST00000461869 TRMT1LQ7Z2T5 733 aaKnown RBP17.3■□□□□ 0.36
SF3A3-203ENST00000461869 ZBTB33Q86T24 672 aa17.3■□□□□ 0.36
SF3A3-203ENST00000461869 BBXQ8WY36 941 aaPredicted RBP17.3■□□□□ 0.36
SF3A3-203ENST00000461869 TMEM117Q9H0C3 514 aa17.3■□□□□ 0.36
SF3A3-203ENST00000461869 ENTPD7Q9NQZ7 604 aa17.3■□□□□ 0.36
SF3A3-203ENST00000461869 WDFY4Q6ZS81 3184 aa17.3■□□□□ 0.36
SF3A3-203ENST00000461869 FNDC1Q4ZHG4 1894 aaPredicted RBP17.3■□□□□ 0.36
SF3A3-203ENST00000461869 IPO5O00410 1097 aaKnown RBP17.29■□□□□ 0.36
SF3A3-203ENST00000461869 WNT7AO00755 349 aa17.29■□□□□ 0.36
SF3A3-203ENST00000461869 DHX15O43143 795 aaKnown RBP17.29■□□□□ 0.36
SF3A3-203ENST00000461869 OR52Z1P0C646 297 aa17.29■□□□□ 0.36
SF3A3-203ENST00000461869 AVPR2P30518 371 aa17.29■□□□□ 0.36
SF3A3-203ENST00000461869 DSC3Q14574 896 aa17.29■□□□□ 0.36
SF3A3-203ENST00000461869 CCDC183Q5T5S1 534 aa17.29■□□□□ 0.36
SF3A3-203ENST00000461869 SYCE2Q6PIF2 218 aa17.29■□□□□ 0.36
SF3A3-203ENST00000461869 LRRC55Q6ZSA7 311 aa17.29■□□□□ 0.36
SF3A3-203ENST00000461869 NGRNQ9NPE2 291 aaKnown RBP17.29■□□□□ 0.36
SF3A3-203ENST00000461869 FAM13BQ9NYF5 915 aa17.29■□□□□ 0.36
SF3A3-203ENST00000461869 HIDE1A8MVS5 230 aa17.28■□□□□ 0.36
SF3A3-203ENST00000461869 HOXA2O43364 376 aa17.28■□□□□ 0.36
SF3A3-203ENST00000461869 KINO60870 393 aaKnown RBP17.28■□□□□ 0.36
SF3A3-203ENST00000461869 LETM1O95202 739 aaPredicted RBP17.28■□□□□ 0.36
SF3A3-203ENST00000461869 CYP3A4P08684 503 aa17.28■□□□□ 0.36
SF3A3-203ENST00000461869 SP100P23497 879 aaPredicted RBP17.28■□□□□ 0.36
SF3A3-203ENST00000461869 LONP1P36776 959 aaKnown RBP17.28■□□□□ 0.36
SF3A3-203ENST00000461869 KRT17Q04695 432 aa17.28■□□□□ 0.36
SF3A3-203ENST00000461869 TPRNQ4KMQ1 711 aa17.28■□□□□ 0.36
SF3A3-203ENST00000461869 RESP18Q5W5W9 173 aa17.28■□□□□ 0.36
SF3A3-203ENST00000461869 KCNT2Q6UVM3 1135 aa17.28■□□□□ 0.36
SF3A3-203ENST00000461869 DTHD1Q6ZMT9 781 aa17.28■□□□□ 0.36
SF3A3-203ENST00000461869 ABI1Q8IZP0 508 aa17.28■□□□□ 0.36
SF3A3-203ENST00000461869 ZNF558Q96NG5 402 aa17.28■□□□□ 0.36
SF3A3-203ENST00000461869 CASD1Q96PB1 797 aa17.28■□□□□ 0.36
SF3A3-203ENST00000461869 ZNF577Q9BSK1 485 aa17.28■□□□□ 0.36
SF3A3-203ENST00000461869 IRF2BPLQ9H1B7 796 aa17.28■□□□□ 0.36
SF3A3-203ENST00000461869 FAM86C1Q9NVL1 165 aa17.28■□□□□ 0.36
SF3A3-203ENST00000461869 DDX25Q9UHL0 483 aaKnown RBP17.28■□□□□ 0.36
SF3A3-203ENST00000461869 MAFBQ9Y5Q3 323 aaPredicted RBP17.28■□□□□ 0.36
SF3A3-203ENST00000461869 IGLV3-22A0A075B6J6 115 aa17.27■□□□□ 0.36
SF3A3-203ENST00000461869 CYP3A7-CYP3A51PA0A087WV96 503 aa17.27■□□□□ 0.36
SF3A3-203ENST00000461869 FAM237AA0A1B0GTK4 181 aa17.27■□□□□ 0.36
SF3A3-203ENST00000461869 ZSCAN20P17040 1043 aaPredicted RBP17.27■□□□□ 0.36
SF3A3-203ENST00000461869 HOXB8P17481 243 aaPredicted RBP17.27■□□□□ 0.36
SF3A3-203ENST00000461869 CYP3A7P24462 503 aa17.27■□□□□ 0.36
SF3A3-203ENST00000461869 CIITAP33076 1130 aa17.27■□□□□ 0.36
SF3A3-203ENST00000461869 PPM1AP35813 382 aa17.27■□□□□ 0.36
SF3A3-203ENST00000461869 TXLNAP40222 546 aa17.27■□□□□ 0.36
SF3A3-203ENST00000461869 PBX3P40426 434 aa17.27■□□□□ 0.36
SF3A3-203ENST00000461869 CALCRLQ16602 461 aa17.27■□□□□ 0.36
SF3A3-203ENST00000461869 ZNF746Q6NUN9 644 aaPredicted RBP17.27■□□□□ 0.36
SF3A3-203ENST00000461869 TMC7Q7Z402 723 aa17.27■□□□□ 0.36
SF3A3-203ENST00000461869 LRRC43Q8N309 656 aa17.27■□□□□ 0.36
SF3A3-203ENST00000461869 CRYGNQ8WXF5 182 aa17.27■□□□□ 0.36
SF3A3-203ENST00000461869 PYM1Q9BRP8 204 aaKnown RBP17.27■□□□□ 0.36
SF3A3-203ENST00000461869 RAB34Q9BZG1 259 aa17.27■□□□□ 0.36
SF3A3-203ENST00000461869 TBC1D22BQ9NU19 505 aa17.27■□□□□ 0.36
SF3A3-203ENST00000461869 RNF19AQ9NV58 838 aa17.27■□□□□ 0.36
SF3A3-203ENST00000461869 NR2E1Q9Y466 385 aa17.27■□□□□ 0.36
SF3A3-203ENST00000461869 VWA3AA6NCI4 1184 aa17.26■□□□□ 0.35
SF3A3-203ENST00000461869 MAGEB2O15479 319 aa17.26■□□□□ 0.35
SF3A3-203ENST00000461869 GFRA3O60609 400 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms