RNA–Protein interactions for RNA: ENST00000461798.5

BRCA1-207, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 3

Gene BRCA1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-207ENST00000461798 POU5F1BQ06416 359 aa10.24□□□□□ -0.77
BRCA1-207ENST00000461798 SMAD2Q15796 467 aaKnown RBP10.24□□□□□ -0.77
BRCA1-207ENST00000461798 SPOUT1Q5T280 376 aaKnown RBP10.24□□□□□ -0.77
BRCA1-207ENST00000461798 PLA2G4FQ68DD2 849 aa10.24□□□□□ -0.77
BRCA1-207ENST00000461798 KCNT2Q6UVM3 1135 aa10.24□□□□□ -0.77
BRCA1-207ENST00000461798 TMEM184AQ6ZMB5 413 aa10.24□□□□□ -0.77
BRCA1-207ENST00000461798 SRGAP1Q7Z6B7 1085 aa10.24□□□□□ -0.77
BRCA1-207ENST00000461798 ADGRD2Q7Z7M1 963 aa10.24□□□□□ -0.77
BRCA1-207ENST00000461798 KSR1Q8IVT5 923 aa10.24□□□□□ -0.77
BRCA1-207ENST00000461798 ABI1Q8IZP0 508 aa10.24□□□□□ -0.77
BRCA1-207ENST00000461798 LRRC43Q8N309 656 aa10.24□□□□□ -0.77
BRCA1-207ENST00000461798 PRPF31Q8WWY3 499 aaKnown RBP10.24□□□□□ -0.77
BRCA1-207ENST00000461798 MRPS27Q92552 414 aaKnown RBP10.24□□□□□ -0.77
BRCA1-207ENST00000461798 KHSRPQ92945 711 aaKnown RBP eCLIP10.24□□□□□ -0.77
BRCA1-207ENST00000461798 DYDC2Q96IM9 177 aa10.24□□□□□ -0.77
BRCA1-207ENST00000461798 CEP170P1Q96L14 293 aa10.24□□□□□ -0.77
BRCA1-207ENST00000461798 CDCA3Q99618 268 aaPredicted RBP10.24□□□□□ -0.77
BRCA1-207ENST00000461798 IGFLR1Q9H665 355 aa10.24□□□□□ -0.77
BRCA1-207ENST00000461798 TLR9Q9NR96 1032 aa10.24□□□□□ -0.77
BRCA1-207ENST00000461798 ANKEF1Q9NU02 776 aa10.24□□□□□ -0.77
BRCA1-207ENST00000461798 CLEC1BQ9P126 229 aa10.24□□□□□ -0.77
BRCA1-207ENST00000461798 HCSTQ9UBK5 93 aa10.24□□□□□ -0.77
BRCA1-207ENST00000461798 PUF60Q9UHX1 559 aaKnown RBP10.24□□□□□ -0.77
BRCA1-207ENST00000461798 COL4A3BPQ9Y5P4 624 aa10.24□□□□□ -0.77
BRCA1-207ENST00000461798 LOXHD1Q8IVV2 1947 aa10.24□□□□□ -0.77
BRCA1-207ENST00000461798 CARNS1A5YM72 827 aa10.23□□□□□ -0.77
BRCA1-207ENST00000461798 LINC01565O15544 149 aa10.23□□□□□ -0.77
BRCA1-207ENST00000461798 MBTPS2O43462 519 aa10.23□□□□□ -0.77
BRCA1-207ENST00000461798 GPR37L1O60883 481 aa10.23□□□□□ -0.77
BRCA1-207ENST00000461798 TBX10O75333 385 aa10.23□□□□□ -0.77
BRCA1-207ENST00000461798 IBSPP21815 317 aaPredicted RBP10.23□□□□□ -0.77
BRCA1-207ENST00000461798 PPM1AP35813 382 aa10.23□□□□□ -0.77
BRCA1-207ENST00000461798 RAB27AP51159 221 aa10.23□□□□□ -0.77
BRCA1-207ENST00000461798 POLGP54098 1239 aaPredicted RBP10.23□□□□□ -0.77
BRCA1-207ENST00000461798 ZP2Q05996 745 aa10.23□□□□□ -0.77
BRCA1-207ENST00000461798 LAMTOR4Q0VGL1 99 aa10.23□□□□□ -0.77
BRCA1-207ENST00000461798 COASYQ13057 564 aa10.23□□□□□ -0.77
BRCA1-207ENST00000461798 SMAD4Q13485 552 aaKnown RBP10.23□□□□□ -0.77
BRCA1-207ENST00000461798 KCNC3Q14003 757 aa10.23□□□□□ -0.77
BRCA1-207ENST00000461798 TRIM29Q14134 588 aa10.23□□□□□ -0.77
BRCA1-207ENST00000461798 PCBP1Q15365 356 aaKnown RBP eCLIP10.23□□□□□ -0.77
BRCA1-207ENST00000461798 CALCRLQ16602 461 aa10.23□□□□□ -0.77
BRCA1-207ENST00000461798 NCAPH2Q6IBW4 605 aa10.23□□□□□ -0.77
BRCA1-207ENST00000461798 EP400NLQ6ZTU2 488 aa10.23□□□□□ -0.77
BRCA1-207ENST00000461798 MRPL10Q7Z7H8 261 aaKnown RBP10.23□□□□□ -0.77
BRCA1-207ENST00000461798 TPH2Q8IWU9 490 aa10.23□□□□□ -0.77
BRCA1-207ENST00000461798 ADHFE1Q8IWW8 467 aa10.23□□□□□ -0.77
BRCA1-207ENST00000461798 THNSL1Q8IYQ7 743 aa10.23□□□□□ -0.77
BRCA1-207ENST00000461798 MICAL1Q8TDZ2 1067 aa10.23□□□□□ -0.77
BRCA1-207ENST00000461798 TCP11Q8WWU5 503 aa10.23□□□□□ -0.77
BRCA1-207ENST00000461798 PSPC1Q8WXF1 523 aaKnown RBP10.23□□□□□ -0.77
BRCA1-207ENST00000461798 ZSCAN31Q96LW9 406 aaPredicted RBP10.23□□□□□ -0.77
BRCA1-207ENST00000461798 ZNF558Q96NG5 402 aa10.23□□□□□ -0.77
BRCA1-207ENST00000461798 KIF2CQ99661 725 aa10.23□□□□□ -0.77
BRCA1-207ENST00000461798 EIF2AK1Q9BQI3 630 aaKnown RBP10.23□□□□□ -0.77
BRCA1-207ENST00000461798 MRPL9Q9BYD2 267 aaKnown RBP10.23□□□□□ -0.77
BRCA1-207ENST00000461798 TLE6Q9H808 572 aa10.23□□□□□ -0.77
BRCA1-207ENST00000461798 TTC12Q9H892 705 aaPredicted RBP10.23□□□□□ -0.77
BRCA1-207ENST00000461798 NGRNQ9NPE2 291 aaKnown RBP10.23□□□□□ -0.77
BRCA1-207ENST00000461798 SPG21Q9NZD8 308 aa10.23□□□□□ -0.77
BRCA1-207ENST00000461798 CD207Q9UJ71 328 aa10.23□□□□□ -0.77
BRCA1-207ENST00000461798 WDR81Q562E7 1941 aa10.23□□□□□ -0.77
BRCA1-207ENST00000461798 WNT7AO00755 349 aa10.22□□□□□ -0.77
BRCA1-207ENST00000461798 ZBTB39O15060 712 aa10.22□□□□□ -0.77
BRCA1-207ENST00000461798 NEMFO60524 1076 aa10.22□□□□□ -0.77
BRCA1-207ENST00000461798 GLP2RO95838 553 aa10.22□□□□□ -0.77
BRCA1-207ENST00000461798 COL9A1P20849 921 aa10.22□□□□□ -0.77
BRCA1-207ENST00000461798 HOXA11P31270 313 aaPredicted RBP10.22□□□□□ -0.77
BRCA1-207ENST00000461798 NRIP1P48552 1158 aa10.22□□□□□ -0.77
BRCA1-207ENST00000461798 KRT17Q04695 432 aa10.22□□□□□ -0.77
BRCA1-207ENST00000461798 ORC2Q13416 577 aaPredicted RBP10.22□□□□□ -0.77
BRCA1-207ENST00000461798 CTTNQ14247 550 aaKnown RBP10.22□□□□□ -0.77
BRCA1-207ENST00000461798 MXD4Q14582 209 aaPredicted RBP10.22□□□□□ -0.77
BRCA1-207ENST00000461798 EMC2Q15006 297 aa10.22□□□□□ -0.77
BRCA1-207ENST00000461798 SAFBQ15424 915 aaKnown RBP eCLIP10.22□□□□□ -0.77
BRCA1-207ENST00000461798 DUSP6Q16828 381 aa10.22□□□□□ -0.77
BRCA1-207ENST00000461798 XKR9Q5GH70 373 aa10.22□□□□□ -0.77
BRCA1-207ENST00000461798 TWF2Q6IBS0 349 aaKnown RBP10.22□□□□□ -0.77
BRCA1-207ENST00000461798 CATSPER4Q7RTX7 472 aa10.22□□□□□ -0.77
BRCA1-207ENST00000461798 FERMT3Q86UX7 667 aa10.22□□□□□ -0.77
BRCA1-207ENST00000461798 IFNLR1Q8IU57 520 aaPredicted RBP10.22□□□□□ -0.77
BRCA1-207ENST00000461798 SLC39A11Q8N1S5 342 aa10.22□□□□□ -0.77
BRCA1-207ENST00000461798 HELQQ8TDG4 1101 aa10.22□□□□□ -0.77
BRCA1-207ENST00000461798 TMEM143Q96AN5 459 aa10.22□□□□□ -0.77
BRCA1-207ENST00000461798 NLRP4Q96MN2 994 aa10.22□□□□□ -0.77
BRCA1-207ENST00000461798 FOXP1Q9H334 677 aaPredicted RBP10.22□□□□□ -0.77
BRCA1-207ENST00000461798 XPNPEP1Q9NQW7 623 aa10.22□□□□□ -0.77
BRCA1-207ENST00000461798 AGPAT5Q9NUQ2 364 aa10.22□□□□□ -0.77
BRCA1-207ENST00000461798 FAM105AQ9NUU6 356 aa10.22□□□□□ -0.77
BRCA1-207ENST00000461798 PIN4Q9Y237 131 aaKnown RBP10.22□□□□□ -0.77
BRCA1-207ENST00000461798 PCDHGC5Q9Y5F6 944 aa10.22□□□□□ -0.77
BRCA1-207ENST00000461798 FNDC1Q4ZHG4 1894 aaPredicted RBP10.21□□□□□ -0.77
BRCA1-207ENST00000461798 OFD1O75665 1012 aa10.21□□□□□ -0.77
BRCA1-207ENST00000461798 DGAT1O75907 488 aa10.21□□□□□ -0.77
BRCA1-207ENST00000461798 SRGAP2CP0DJJ0 459 aa10.21□□□□□ -0.77
BRCA1-207ENST00000461798 ALADP13716 330 aa10.21□□□□□ -0.77
BRCA1-207ENST00000461798 ARL2P36404 184 aa10.21□□□□□ -0.77
BRCA1-207ENST00000461798 TXKP42681 527 aa10.21□□□□□ -0.77
BRCA1-207ENST00000461798 ALDH7A1P49419 539 aaKnown RBP10.21□□□□□ -0.77
BRCA1-207ENST00000461798 NDUFV1P49821 464 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms