RNA–Protein interactions for RNA: ENST00000461540.2

CCT4-203, Transcript of chaperonin containing TCP1 subunit 4, humanhuman

TSL 3

Gene CCT4, Length 638 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT4-203ENST00000461540 ADAM15Q13444 863 aa4.96□□□□□ -1.62
CCT4-203ENST00000461540 TRIM61Q5EBN2 209 aa4.96□□□□□ -1.62
CCT4-203ENST00000461540 CATSPEREQ5SY80 951 aa4.96□□□□□ -1.62
CCT4-203ENST00000461540 BRAPQ7Z569 592 aa4.96□□□□□ -1.62
CCT4-203ENST00000461540 SRRM1Q8IYB3 904 aaKnown RBP4.96□□□□□ -1.62
CCT4-203ENST00000461540 ZSWIM2Q8NEG5 633 aa4.96□□□□□ -1.62
CCT4-203ENST00000461540 CPT1CQ8TCG5 803 aa4.96□□□□□ -1.62
CCT4-203ENST00000461540 UBXN4Q92575 508 aa4.96□□□□□ -1.62
CCT4-203ENST00000461540 ANKS1AQ92625 1134 aa4.96□□□□□ -1.62
CCT4-203ENST00000461540 MAGEL2Q9UJ55 1249 aa4.96□□□□□ -1.62
CCT4-203ENST00000461540 COL3A1P02461 1466 aaPredicted RBP4.95□□□□□ -1.62
CCT4-203ENST00000461540 CCDC163A0A0D9SF12 145 aa4.95□□□□□ -1.62
CCT4-203ENST00000461540 MFAP3LO75121 409 aa4.95□□□□□ -1.62
CCT4-203ENST00000461540 KRT37O76014 449 aa4.95□□□□□ -1.62
CCT4-203ENST00000461540 NPTXRO95502 500 aa4.95□□□□□ -1.62
CCT4-203ENST00000461540 ZEB1P37275 1124 aaPredicted RBP4.95□□□□□ -1.62
CCT4-203ENST00000461540 ADCY7P51828 1080 aa4.95□□□□□ -1.62
CCT4-203ENST00000461540 TMEM177Q53S58 311 aa4.95□□□□□ -1.62
CCT4-203ENST00000461540 ABHD17CQ6PCB6 329 aa4.95□□□□□ -1.62
CCT4-203ENST00000461540 FGD2Q7Z6J4 655 aa4.95□□□□□ -1.62
CCT4-203ENST00000461540 LCORLQ8N3X6 602 aa4.95□□□□□ -1.62
CCT4-203ENST00000461540 MB21D1Q8N884 522 aa4.95□□□□□ -1.62
CCT4-203ENST00000461540 FAM193BQ96PV7 902 aaPredicted RBP4.95□□□□□ -1.62
CCT4-203ENST00000461540 LRFN3Q9BTN0 628 aa4.95□□□□□ -1.62
CCT4-203ENST00000461540 SORCS3Q9UPU3 1222 aa4.95□□□□□ -1.62
CCT4-203ENST00000461540 VWA7Q9Y334 891 aa4.95□□□□□ -1.62
CCT4-203ENST00000461540 CTDP1Q9Y5B0 961 aaPredicted RBP4.95□□□□□ -1.62
CCT4-203ENST00000461540 GRXCR1A8MXD5 290 aa4.94□□□□□ -1.62
CCT4-203ENST00000461540 H2AFYO75367 372 aaKnown RBP4.94□□□□□ -1.62
CCT4-203ENST00000461540 RECQL4O94761 1208 aa4.94□□□□□ -1.62
CCT4-203ENST00000461540 ZBTB48P10074 688 aaPredicted RBP4.94□□□□□ -1.62
CCT4-203ENST00000461540 ALDH6A1Q02252 535 aaKnown RBP4.94□□□□□ -1.62
CCT4-203ENST00000461540 ACAP1Q15027 740 aa4.94□□□□□ -1.62
CCT4-203ENST00000461540 KLHDC10Q6PID8 442 aa4.94□□□□□ -1.62
CCT4-203ENST00000461540 ELOA2Q8IYF1 753 aaPredicted RBP4.94□□□□□ -1.62
CCT4-203ENST00000461540 ARMC5Q96C12 935 aa4.94□□□□□ -1.62
CCT4-203ENST00000461540 BOCQ9BWV1 1114 aa4.94□□□□□ -1.62
CCT4-203ENST00000461540 MRPL4Q9BYD3 311 aaKnown RBP4.94□□□□□ -1.62
CCT4-203ENST00000461540 SLC6A15Q9H2J7 730 aa4.94□□□□□ -1.62
CCT4-203ENST00000461540 SERHL2Q9H4I8 314 aa4.94□□□□□ -1.62
CCT4-203ENST00000461540 SAE1Q9UBE0 346 aaPredicted RBP4.94□□□□□ -1.62
CCT4-203ENST00000461540 CENPVL1A0A0U1RR11 272 aa4.93□□□□□ -1.62
CCT4-203ENST00000461540 GOLGA8BA8MQT2 603 aa4.93□□□□□ -1.62
CCT4-203ENST00000461540 KCNQ2O43526 872 aa4.93□□□□□ -1.62
CCT4-203ENST00000461540 IPO13O94829 963 aaKnown RBP4.93□□□□□ -1.62
CCT4-203ENST00000461540 TYRP1P17643 537 aa4.93□□□□□ -1.62
CCT4-203ENST00000461540 NCLP19338 710 aaKnown RBP4.93□□□□□ -1.62
CCT4-203ENST00000461540 CXCR5P32302 372 aa4.93□□□□□ -1.62
CCT4-203ENST00000461540 ZNF81P51508 661 aa4.93□□□□□ -1.62
CCT4-203ENST00000461540 SESN2P58004 480 aaPredicted RBP4.93□□□□□ -1.62
CCT4-203ENST00000461540 SOGA3Q5TF21 947 aa4.93□□□□□ -1.62
CCT4-203ENST00000461540 MFSD5Q6N075 450 aa4.93□□□□□ -1.62
CCT4-203ENST00000461540 CC2D1AQ6P1N0 951 aaPredicted RBP4.93□□□□□ -1.62
CCT4-203ENST00000461540 BCL6BQ8N143 479 aaPredicted RBP4.93□□□□□ -1.62
CCT4-203ENST00000461540 FAM98AQ8NCA5 519 aaKnown RBP4.93□□□□□ -1.62
CCT4-203ENST00000461540 PMFBP1Q8TBY8 1022 aa4.93□□□□□ -1.62
CCT4-203ENST00000461540 GCDHQ92947 438 aaPredicted RBP4.93□□□□□ -1.62
CCT4-203ENST00000461540 CAVIN3Q969G5 261 aa4.93□□□□□ -1.62
CCT4-203ENST00000461540 E2F7Q96AV8 911 aa4.93□□□□□ -1.62
CCT4-203ENST00000461540 FOXRED1Q96CU9 486 aaPredicted RBP4.93□□□□□ -1.62
CCT4-203ENST00000461540 RPL10LQ96L21 214 aaKnown RBP4.93□□□□□ -1.62
CCT4-203ENST00000461540 FOXB1Q99853 325 aa4.93□□□□□ -1.62
CCT4-203ENST00000461540 TCF25Q9BQ70 676 aa4.93□□□□□ -1.62
CCT4-203ENST00000461540 DENND2AQ9ULE3 1009 aa4.93□□□□□ -1.62
CCT4-203ENST00000461540 UBE2QL1A1L167 161 aa4.92□□□□□ -1.62
CCT4-203ENST00000461540 RGS3P49796 1198 aa4.92□□□□□ -1.62
CCT4-203ENST00000461540 KIF11P52732 1056 aa4.92□□□□□ -1.62
CCT4-203ENST00000461540 SLC6A3Q01959 620 aa4.92□□□□□ -1.62
CCT4-203ENST00000461540 ROM1Q03395 351 aa4.92□□□□□ -1.62
CCT4-203ENST00000461540 ARHGAP44Q17R89 818 aa4.92□□□□□ -1.62
CCT4-203ENST00000461540 KRTAP5-1Q6L8H4 278 aa4.92□□□□□ -1.62
CCT4-203ENST00000461540 OTOP1Q7RTM1 612 aa4.92□□□□□ -1.62
CCT4-203ENST00000461540 C1QL2Q7Z5L3 287 aa4.92□□□□□ -1.62
CCT4-203ENST00000461540 DDX53Q86TM3 631 aaKnown RBP4.92□□□□□ -1.62
CCT4-203ENST00000461540 RTN4RL1Q86UN2 441 aaPredicted RBP4.92□□□□□ -1.62
CCT4-203ENST00000461540 JMYQ8N9B5 988 aa4.92□□□□□ -1.62
CCT4-203ENST00000461540 SIMC1Q8NDZ2 872 aa4.92□□□□□ -1.62
CCT4-203ENST00000461540 GFM2Q969S9 779 aaKnown RBP4.92□□□□□ -1.62
CCT4-203ENST00000461540 MKL1Q969V6 931 aa4.92□□□□□ -1.62
CCT4-203ENST00000461540 C1QTNF7Q9BXJ2 289 aa4.92□□□□□ -1.62
CCT4-203ENST00000461540 TRIM39Q9HCM9 518 aa4.92□□□□□ -1.62
CCT4-203ENST00000461540 SAMD15Q9P1V8 674 aa4.92□□□□□ -1.62
CCT4-203ENST00000461540 RBM8AQ9Y5S9 174 aaKnown RBP4.92□□□□□ -1.62
CCT4-203ENST00000461540 PTCH2Q9Y6C5 1203 aa4.92□□□□□ -1.62
CCT4-203ENST00000461540 C2orf78A6NCI8 922 aa4.91□□□□□ -1.62
CCT4-203ENST00000461540 M0R2C6 588 aa4.91□□□□□ -1.62
CCT4-203ENST00000461540 MAFO75444 373 aaPredicted RBP4.91□□□□□ -1.62
CCT4-203ENST00000461540 SCAF4O95104 1147 aaKnown RBP4.91□□□□□ -1.62
CCT4-203ENST00000461540 ANTXR2P58335 489 aa4.91□□□□□ -1.62
CCT4-203ENST00000461540 C1QL3Q5VWW1 255 aa4.91□□□□□ -1.62
CCT4-203ENST00000461540 CCDC62Q6P9F0 684 aa4.91□□□□□ -1.62
CCT4-203ENST00000461540 CMTR2Q8IYT2 770 aaKnown RBP4.91□□□□□ -1.62
CCT4-203ENST00000461540 ANKRD53Q8N9V6 530 aa4.91□□□□□ -1.62
CCT4-203ENST00000461540 SLC7A6OSQ96CW6 309 aaPredicted RBP4.91□□□□□ -1.62
CCT4-203ENST00000461540 MYEOVQ96EZ4 313 aa4.91□□□□□ -1.62
CCT4-203ENST00000461540 GPHA2Q96T91 129 aa4.91□□□□□ -1.62
CCT4-203ENST00000461540 WDR11Q9BZH6 1224 aa4.91□□□□□ -1.62
CCT4-203ENST00000461540 NCOA5Q9HCD5 579 aaKnown RBP4.91□□□□□ -1.62
CCT4-203ENST00000461540 B4E1Z4 1266 aa4.9□□□□□ -1.63
CCT4-203ENST00000461540 LPXNO60711 386 aa4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms