RNA–Protein interactions for RNA: ENST00000461437.5

NUP50-213, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-213ENST00000461437 MBTPS2O43462 519 aa17.29■□□□□ 0.36
NUP50-213ENST00000461437 B4GALT3O60512 393 aa17.29■□□□□ 0.36
NUP50-213ENST00000461437 USO1O60763 962 aaKnown RBP17.29■□□□□ 0.36
NUP50-213ENST00000461437 MED24O75448 989 aa17.29■□□□□ 0.36
NUP50-213ENST00000461437 SPATA31C1P0DKV0 1188 aa17.29■□□□□ 0.36
NUP50-213ENST00000461437 TECP42680 631 aa17.29■□□□□ 0.36
NUP50-213ENST00000461437 AFF1P51825 1210 aaKnown RBP17.29■□□□□ 0.36
NUP50-213ENST00000461437 UBXN11Q5T124 520 aa17.29■□□□□ 0.36
NUP50-213ENST00000461437 GJD3Q8N144 294 aa17.29■□□□□ 0.36
NUP50-213ENST00000461437 FAM184AQ8NB25 1140 aa17.29■□□□□ 0.36
NUP50-213ENST00000461437 MRPS27Q92552 414 aaKnown RBP17.29■□□□□ 0.36
NUP50-213ENST00000461437 CPB2Q96IY4 423 aa17.29■□□□□ 0.36
NUP50-213ENST00000461437 ZSCAN31Q96LW9 406 aaPredicted RBP17.29■□□□□ 0.36
NUP50-213ENST00000461437 ZNF558Q96NG5 402 aa17.29■□□□□ 0.36
NUP50-213ENST00000461437 INO80BQ9C086 356 aaPredicted RBP17.29■□□□□ 0.36
NUP50-213ENST00000461437 GBP3Q9H0R5 595 aa17.29■□□□□ 0.36
NUP50-213ENST00000461437 TLE6Q9H808 572 aa17.29■□□□□ 0.36
NUP50-213ENST00000461437 GPRC5CQ9NQ84 441 aa17.29■□□□□ 0.36
NUP50-213ENST00000461437 CHST12Q9NRB3 414 aa17.29■□□□□ 0.36
NUP50-213ENST00000461437 AGPAT5Q9NUQ2 364 aa17.29■□□□□ 0.36
NUP50-213ENST00000461437 HIDE1A8MVS5 230 aa17.28■□□□□ 0.36
NUP50-213ENST00000461437 FSCN2O14926 492 aa17.28■□□□□ 0.36
NUP50-213ENST00000461437 EOMESO95936 686 aa17.28■□□□□ 0.36
NUP50-213ENST00000461437 RBM25P49756 843 aaKnown RBP17.28■□□□□ 0.36
NUP50-213ENST00000461437 RARRES1P49788 294 aa17.28■□□□□ 0.36
NUP50-213ENST00000461437 CDC42EP1Q00587 391 aa17.28■□□□□ 0.36
NUP50-213ENST00000461437 CAPSQ13938 189 aa17.28■□□□□ 0.36
NUP50-213ENST00000461437 TTC38Q5R3I4 469 aa17.28■□□□□ 0.36
NUP50-213ENST00000461437 LLGL2Q6P1M3 1020 aa17.28■□□□□ 0.36
NUP50-213ENST00000461437 SLC39A11Q8N1S5 342 aa17.28■□□□□ 0.36
NUP50-213ENST00000461437 EFHBQ8N7U6 833 aa17.28■□□□□ 0.36
NUP50-213ENST00000461437 FBXO18Q8NFZ0 1043 aa17.28■□□□□ 0.36
NUP50-213ENST00000461437 CCDC43Q96MW1 224 aaKnown RBP17.28■□□□□ 0.36
NUP50-213ENST00000461437 TCF25Q9BQ70 676 aa17.28■□□□□ 0.36
NUP50-213ENST00000461437 ENTPD7Q9NQZ7 604 aa17.28■□□□□ 0.36
NUP50-213ENST00000461437 CD207Q9UJ71 328 aa17.28■□□□□ 0.36
NUP50-213ENST00000461437 ZC3H11AO75152 810 aaKnown RBP eCLIP17.27■□□□□ 0.36
NUP50-213ENST00000461437 OFD1O75665 1012 aa17.27■□□□□ 0.36
NUP50-213ENST00000461437 LYPLA2O95372 231 aa17.27■□□□□ 0.36
NUP50-213ENST00000461437 OR52Z1P0C646 297 aa17.27■□□□□ 0.36
NUP50-213ENST00000461437 HOXA11P31270 313 aaPredicted RBP17.27■□□□□ 0.36
NUP50-213ENST00000461437 CA8P35219 290 aa17.27■□□□□ 0.36
NUP50-213ENST00000461437 BCAR1P56945 870 aa17.27■□□□□ 0.36
NUP50-213ENST00000461437 UBE3AQ05086 875 aa17.27■□□□□ 0.36
NUP50-213ENST00000461437 GNL2Q13823 731 aaKnown RBP17.27■□□□□ 0.36
NUP50-213ENST00000461437 POTEGQ6S5H5 508 aa17.27■□□□□ 0.36
NUP50-213ENST00000461437 AGMOQ6ZNB7 445 aa17.27■□□□□ 0.36
NUP50-213ENST00000461437 SRGAP1Q7Z6B7 1085 aa17.27■□□□□ 0.36
NUP50-213ENST00000461437 CDR2LQ86X02 465 aaPredicted RBP17.27■□□□□ 0.36
NUP50-213ENST00000461437 CATSPER3Q86XQ3 398 aa17.27■□□□□ 0.36
NUP50-213ENST00000461437 BCL7CQ8WUZ0 217 aaPredicted RBP17.27■□□□□ 0.36
NUP50-213ENST00000461437 TCP11Q8WWU5 503 aa17.27■□□□□ 0.36
NUP50-213ENST00000461437 MSLNLQ96KJ4 702 aa17.27■□□□□ 0.36
NUP50-213ENST00000461437 APOL5Q9BWW9 433 aa17.27■□□□□ 0.36
NUP50-213ENST00000461437 EIF2AQ9BY44 585 aaKnown RBP17.27■□□□□ 0.36
NUP50-213ENST00000461437 POLR3FQ9H1D9 316 aaPredicted RBP17.27■□□□□ 0.36
NUP50-213ENST00000461437 NRDE2Q9H7Z3 1164 aa17.27■□□□□ 0.36
NUP50-213ENST00000461437 POLD4Q9HCU8 107 aa17.27■□□□□ 0.36
NUP50-213ENST00000461437 SH2B1Q9NRF2 756 aaPredicted RBP17.27■□□□□ 0.36
NUP50-213ENST00000461437 TBC1D13Q9NVG8 400 aa17.27■□□□□ 0.36
NUP50-213ENST00000461437 DNAJB4Q9UDY4 337 aa17.27■□□□□ 0.36
NUP50-213ENST00000461437 PCDHB2Q9Y5E7 798 aa17.27■□□□□ 0.36
NUP50-213ENST00000461437 INO80B-WBP1J3KQ70 363 aa17.26■□□□□ 0.35
NUP50-213ENST00000461437 NCK2O43639 380 aa17.26■□□□□ 0.35
NUP50-213ENST00000461437 GLRA2P23416 452 aa17.26■□□□□ 0.35
NUP50-213ENST00000461437 PLA2G5P39877 138 aa17.26■□□□□ 0.35
NUP50-213ENST00000461437 HMGN5P82970 282 aaKnown RBP17.26■□□□□ 0.35
NUP50-213ENST00000461437 PLCB3Q01970 1234 aa17.26■□□□□ 0.35
NUP50-213ENST00000461437 ZP2Q05996 745 aa17.26■□□□□ 0.35
NUP50-213ENST00000461437 DUSP6Q16828 381 aa17.26■□□□□ 0.35
NUP50-213ENST00000461437 FAM43BQ6ZT52 329 aaPredicted RBP17.26■□□□□ 0.35
NUP50-213ENST00000461437 ZNF280BQ86YH2 543 aa17.26■□□□□ 0.35
NUP50-213ENST00000461437 AUTS2Q8WXX7 1259 aa17.26■□□□□ 0.35
NUP50-213ENST00000461437 PPP2R3CQ969Q6 453 aa17.26■□□□□ 0.35
NUP50-213ENST00000461437 FOXP1Q9H334 677 aaPredicted RBP17.26■□□□□ 0.35
NUP50-213ENST00000461437 ANKEF1Q9NU02 776 aa17.26■□□□□ 0.35
NUP50-213ENST00000461437 SPG21Q9NZD8 308 aa17.26■□□□□ 0.35
NUP50-213ENST00000461437 HES2Q9Y543 173 aa17.26■□□□□ 0.35
NUP50-213ENST00000461437 PPME1Q9Y570 386 aa17.26■□□□□ 0.35
NUP50-213ENST00000461437 TRIP11Q15643 1979 aa17.26■□□□□ 0.35
NUP50-213ENST00000461437 B4GALT5O43286 388 aa17.25■□□□□ 0.35
NUP50-213ENST00000461437 TSPAN1O60635 241 aa17.25■□□□□ 0.35
NUP50-213ENST00000461437 ARL2P36404 184 aa17.25■□□□□ 0.35
NUP50-213ENST00000461437 TOB1P50616 345 aaPredicted RBP17.25■□□□□ 0.35
NUP50-213ENST00000461437 PTENP60484 403 aa17.25■□□□□ 0.35
NUP50-213ENST00000461437 SMAD4Q13485 552 aaKnown RBP17.25■□□□□ 0.35
NUP50-213ENST00000461437 ECM1Q16610 540 aa17.25■□□□□ 0.35
NUP50-213ENST00000461437 PUS10Q3MIT2 529 aaKnown RBP17.25■□□□□ 0.35
NUP50-213ENST00000461437 NOMO2Q5JPE7 1267 aa17.25■□□□□ 0.35
NUP50-213ENST00000461437 TMC7Q7Z402 723 aa17.25■□□□□ 0.35
NUP50-213ENST00000461437 NOSTRINQ8IVI9 506 aa17.25■□□□□ 0.35
NUP50-213ENST00000461437 SMG8Q8ND04 991 aaKnown RBP17.25■□□□□ 0.35
NUP50-213ENST00000461437 TRAIPQ9BWF2 469 aa17.25■□□□□ 0.35
NUP50-213ENST00000461437 APOL6Q9BWW8 343 aa17.25■□□□□ 0.35
NUP50-213ENST00000461437 RNF39Q9H2S5 420 aa17.25■□□□□ 0.35
NUP50-213ENST00000461437 C11orf16Q9NQ32 467 aa17.25■□□□□ 0.35
NUP50-213ENST00000461437 CDH22Q9UJ99 828 aa17.25■□□□□ 0.35
NUP50-213ENST00000461437 GAS2O43903 313 aaKnown RBP17.24■□□□□ 0.35
NUP50-213ENST00000461437 DGAT1O75907 488 aa17.24■□□□□ 0.35
NUP50-213ENST00000461437 DDHD2O94830 711 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms