RNA–Protein interactions for RNA: ENST00000461383.1

VCL-203, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 268 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-203ENST00000461383 DTX3Q8N9I9 347 aa4.02□□□□□ -1.77
VCL-203ENST00000461383 FBXO15Q8NCQ5 510 aaPredicted RBP4.02□□□□□ -1.77
VCL-203ENST00000461383 OR5AN1Q8NGI8 311 aa4.02□□□□□ -1.77
VCL-203ENST00000461383 ZSCAN18Q8TBC5 510 aaPredicted RBP4.02□□□□□ -1.77
VCL-203ENST00000461383 TSPEARQ8WU66 669 aa4.02□□□□□ -1.77
VCL-203ENST00000461383 PMM1Q92871 262 aa4.02□□□□□ -1.77
VCL-203ENST00000461383 HPS3Q969F9 1004 aa4.02□□□□□ -1.77
VCL-203ENST00000461383 HDAC10Q969S8 669 aa4.02□□□□□ -1.77
VCL-203ENST00000461383 COA7Q96BR5 231 aa4.02□□□□□ -1.77
VCL-203ENST00000461383 MVB12AQ96EY5 273 aa4.02□□□□□ -1.77
VCL-203ENST00000461383 DYDC2Q96IM9 177 aa4.02□□□□□ -1.77
VCL-203ENST00000461383 PAWRQ96IZ0 340 aaKnown RBP4.02□□□□□ -1.77
VCL-203ENST00000461383 FAM193BQ96PV7 902 aaPredicted RBP4.02□□□□□ -1.77
VCL-203ENST00000461383 TAAR9Q96RI9 348 aa4.02□□□□□ -1.77
VCL-203ENST00000461383 PITHD1Q9GZP4 211 aaPredicted RBP4.02□□□□□ -1.77
VCL-203ENST00000461383 PRDM12Q9H4Q4 367 aa4.02□□□□□ -1.77
VCL-203ENST00000461383 NSUN3Q9H649 340 aaKnown RBP4.02□□□□□ -1.77
VCL-203ENST00000461383 SAE1Q9UBE0 346 aaPredicted RBP4.02□□□□□ -1.77
VCL-203ENST00000461383 DDX20Q9UHI6 824 aaKnown RBP4.02□□□□□ -1.77
VCL-203ENST00000461383 USP25Q9UHP3 1055 aa4.02□□□□□ -1.77
VCL-203ENST00000461383 MAGEL2Q9UJ55 1249 aa4.02□□□□□ -1.77
VCL-203ENST00000461383 TMPRSS11EQ9UL52 423 aa4.02□□□□□ -1.77
VCL-203ENST00000461383 INTUQ9ULD6 942 aa4.02□□□□□ -1.77
VCL-203ENST00000461383 COMMD10Q9Y6G5 202 aa4.02□□□□□ -1.77
VCL-203ENST00000461383 A0A0A6YYJ9 748 aa4.01□□□□□ -1.77
VCL-203ENST00000461383 CCDC154A6NI56 674 aa4.01□□□□□ -1.77
VCL-203ENST00000461383 RPLP2P05387 115 aaKnown RBP4.01□□□□□ -1.77
VCL-203ENST00000461383 CELA3BP08861 270 aa4.01□□□□□ -1.77
VCL-203ENST00000461383 TRIM27P14373 513 aa4.01□□□□□ -1.77
VCL-203ENST00000461383 GSPT1P15170 499 aaKnown RBP4.01□□□□□ -1.77
VCL-203ENST00000461383 ITGA1P56199 1179 aa4.01□□□□□ -1.77
VCL-203ENST00000461383 MGAT5Q09328 741 aa4.01□□□□□ -1.77
VCL-203ENST00000461383 NOMO1Q15155 1222 aa4.01□□□□□ -1.77
VCL-203ENST00000461383 SAFBQ15424 915 aaKnown RBP eCLIP4.01□□□□□ -1.77
VCL-203ENST00000461383 ADRM1Q16186 407 aa4.01□□□□□ -1.77
VCL-203ENST00000461383 BTNL9Q6UXG8 535 aa4.01□□□□□ -1.77
VCL-203ENST00000461383 CCDC149Q6ZUS6 474 aa4.01□□□□□ -1.77
VCL-203ENST00000461383 SYDE1Q6ZW31 735 aaPredicted RBP4.01□□□□□ -1.77
VCL-203ENST00000461383 GAREM2Q75VX8 874 aa4.01□□□□□ -1.77
VCL-203ENST00000461383 CXXC5Q7LFL8 322 aaKnown RBP4.01□□□□□ -1.77
VCL-203ENST00000461383 LRRC56Q8IYG6 542 aaPredicted RBP4.01□□□□□ -1.77
VCL-203ENST00000461383 EXOC8Q8IYI6 725 aa4.01□□□□□ -1.77
VCL-203ENST00000461383 GLB1L3Q8NCI6 653 aaPredicted RBP4.01□□□□□ -1.77
VCL-203ENST00000461383 ZBTB34Q8NCN2 500 aa4.01□□□□□ -1.77
VCL-203ENST00000461383 PJA1Q8NG27 643 aa4.01□□□□□ -1.77
VCL-203ENST00000461383 DIS3LQ8TF46 1054 aaKnown RBP4.01□□□□□ -1.77
VCL-203ENST00000461383 NRG4Q8WWG1 115 aa4.01□□□□□ -1.77
VCL-203ENST00000461383 RUNDC1Q96C34 613 aa4.01□□□□□ -1.77
VCL-203ENST00000461383 C1GALT1C1Q96EU7 318 aa4.01□□□□□ -1.77
VCL-203ENST00000461383 ACO2Q99798 780 aaKnown RBP4.01□□□□□ -1.77
VCL-203ENST00000461383 SARGQ9BW04 601 aa4.01□□□□□ -1.77
VCL-203ENST00000461383 SLC12A5Q9H2X9 1139 aa4.01□□□□□ -1.77
VCL-203ENST00000461383 GREM2Q9H772 168 aa4.01□□□□□ -1.77
VCL-203ENST00000461383 CD320Q9NPF0 282 aa4.01□□□□□ -1.77
VCL-203ENST00000461383 POLR3BQ9NW08 1133 aaPredicted RBP4.01□□□□□ -1.77
VCL-203ENST00000461383 EVLQ9UI08 416 aaPredicted RBP4.01□□□□□ -1.77
VCL-203ENST00000461383 SERPINB13Q9UIV8 391 aa4.01□□□□□ -1.77
VCL-203ENST00000461383 FBXO10Q9UK96 956 aa4.01□□□□□ -1.77
VCL-203ENST00000461383 RIPOR2Q9Y4F9 1068 aa4.01□□□□□ -1.77
VCL-203ENST00000461383 PLEKHD1A6NEE1 506 aa4□□□□□ -1.77
VCL-203ENST00000461383 H0Y858 1186 aa4□□□□□ -1.77
VCL-203ENST00000461383 PEX10O60683 326 aa4□□□□□ -1.77
VCL-203ENST00000461383 PRAMEF4O60810 478 aa4□□□□□ -1.77
VCL-203ENST00000461383 C1QTNF9P0C862 333 aa4□□□□□ -1.77
VCL-203ENST00000461383 CDR1P51861 262 aa4□□□□□ -1.77
VCL-203ENST00000461383 SAFB2Q14151 953 aaKnown RBP eCLIP4□□□□□ -1.77
VCL-203ENST00000461383 LLGL1Q15334 1064 aa4□□□□□ -1.77
VCL-203ENST00000461383 STILQ15468 1287 aa4□□□□□ -1.77
VCL-203ENST00000461383 MAN2A1Q16706 1144 aa4□□□□□ -1.77
VCL-203ENST00000461383 ATAT1Q5SQI0 421 aa4□□□□□ -1.77
VCL-203ENST00000461383 KANK2Q63ZY3 851 aa4□□□□□ -1.77
VCL-203ENST00000461383 IL31Q6EBC2 164 aa4□□□□□ -1.77
VCL-203ENST00000461383 PPP4R3AQ6IN85 833 aa4□□□□□ -1.77
VCL-203ENST00000461383 TRMT10BQ6PF06 316 aaKnown RBP4□□□□□ -1.77
VCL-203ENST00000461383 B3GNT8Q7Z7M8 397 aa4□□□□□ -1.77
VCL-203ENST00000461383 LYSMD2Q8IV50 215 aa4□□□□□ -1.77
VCL-203ENST00000461383 DENND1CQ8IV53 801 aa4□□□□□ -1.77
VCL-203ENST00000461383 SLC41A1Q8IVJ1 513 aa4□□□□□ -1.77
VCL-203ENST00000461383 IFNL2Q8IZJ0 200 aa4□□□□□ -1.77
VCL-203ENST00000461383 TTLL6Q8N841 843 aa4□□□□□ -1.77
VCL-203ENST00000461383 MARCH10Q8NA82 808 aaPredicted RBP4□□□□□ -1.77
VCL-203ENST00000461383 MZB1Q8WU39 189 aa4□□□□□ -1.77
VCL-203ENST00000461383 ZBTB8AQ96BR9 441 aa4□□□□□ -1.77
VCL-203ENST00000461383 C7orf25Q9BPX7 421 aa4□□□□□ -1.77
VCL-203ENST00000461383 SYT3Q9BQG1 590 aa4□□□□□ -1.77
VCL-203ENST00000461383 GORASP1Q9BQQ3 440 aa4□□□□□ -1.77
VCL-203ENST00000461383 KRTAP17-1Q9BYP8 105 aa4□□□□□ -1.77
VCL-203ENST00000461383 CNTD2Q9H8S5 307 aa4□□□□□ -1.77
VCL-203ENST00000461383 DMRT3Q9NQL9 472 aa4□□□□□ -1.77
VCL-203ENST00000461383 KMT5AQ9NQR1 393 aa4□□□□□ -1.77
VCL-203ENST00000461383 DNAI1Q9UI46 699 aa4□□□□□ -1.77
VCL-203ENST00000461383 WASF3Q9UPY6 502 aa4□□□□□ -1.77
VCL-203ENST00000461383 A0A0G2JNJ9 132 aa3.99□□□□□ -1.77
VCL-203ENST00000461383 TEX51A0A1B0GUA7 166 aa3.99□□□□□ -1.77
VCL-203ENST00000461383 FAM171A2A8MVW0 826 aa3.99□□□□□ -1.77
VCL-203ENST00000461383 FAM227AF5H4B4 570 aa3.99□□□□□ -1.77
VCL-203ENST00000461383 DAPK3O43293 454 aa3.99□□□□□ -1.77
VCL-203ENST00000461383 HTRA2O43464 458 aaPredicted RBP3.99□□□□□ -1.77
VCL-203ENST00000461383 AKR1B10O60218 316 aa3.99□□□□□ -1.77
VCL-203ENST00000461383 FSBPO95073 299 aa3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms