RNA–Protein interactions for RNA: ENST00000461221.5

BRCA1-205, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 5,693 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-205ENST00000461221 TARSL2A2RTX5 802 aaKnown RBP9.55□□□□□ -0.88
BRCA1-205ENST00000461221 AP3B1O00203 1094 aa9.55□□□□□ -0.88
BRCA1-205ENST00000461221 SUPT3HO75486 399 aa9.55□□□□□ -0.88
BRCA1-205ENST00000461221 PHKA2P46019 1235 aa9.55□□□□□ -0.88
BRCA1-205ENST00000461221 ROR1Q01973 937 aa9.55□□□□□ -0.88
BRCA1-205ENST00000461221 NR5A1Q13285 461 aa9.55□□□□□ -0.88
BRCA1-205ENST00000461221 LRRC24Q50LG9 513 aa9.55□□□□□ -0.88
BRCA1-205ENST00000461221 ICE2Q659A1 982 aa9.55□□□□□ -0.88
BRCA1-205ENST00000461221 NLRP4Q96MN2 994 aa9.55□□□□□ -0.88
BRCA1-205ENST00000461221 SERPINB13Q9UIV8 391 aa9.55□□□□□ -0.88
BRCA1-205ENST00000461221 C5orf58C9J3I9 102 aa9.55□□□□□ -0.88
BRCA1-205ENST00000461221 SH2B2O14492 632 aaPredicted RBP9.55□□□□□ -0.88
BRCA1-205ENST00000461221 PNMA6AP0CW24 399 aaPredicted RBP9.55□□□□□ -0.88
BRCA1-205ENST00000461221 PHKA1P46020 1223 aa9.55□□□□□ -0.88
BRCA1-205ENST00000461221 DEFA1P59665 94 aa9.55□□□□□ -0.88
BRCA1-205ENST00000461221 DEFA3P59666 94 aa9.55□□□□□ -0.88
BRCA1-205ENST00000461221 KRT31Q15323 416 aa9.55□□□□□ -0.88
BRCA1-205ENST00000461221 EFHC2Q5JST6 749 aa9.55□□□□□ -0.88
BRCA1-205ENST00000461221 PARP9Q8IXQ6 854 aa9.55□□□□□ -0.88
BRCA1-205ENST00000461221 GOLPH3LQ9H4A5 285 aa9.55□□□□□ -0.88
BRCA1-205ENST00000461221 ATG3Q9NT62 314 aa9.55□□□□□ -0.88
BRCA1-205ENST00000461221 NDFIP2Q9NV92 336 aa9.55□□□□□ -0.88
BRCA1-205ENST00000461221 NIPSNAP3AQ9UFN0 247 aaPredicted RBP9.55□□□□□ -0.88
BRCA1-205ENST00000461221 THOC2Q8NI27 1593 aaKnown RBP9.55□□□□□ -0.88
BRCA1-205ENST00000461221 ORC4O43929 436 aa9.55□□□□□ -0.88
BRCA1-205ENST00000461221 IFNAR1P17181 557 aa9.55□□□□□ -0.88
BRCA1-205ENST00000461221 IREB2P48200 963 aaKnown RBP9.55□□□□□ -0.88
BRCA1-205ENST00000461221 RAD23BP54727 409 aa9.55□□□□□ -0.88
BRCA1-205ENST00000461221 UNC13DQ70J99 1090 aa9.55□□□□□ -0.88
BRCA1-205ENST00000461221 TTC30AQ86WT1 665 aa9.55□□□□□ -0.88
BRCA1-205ENST00000461221 GRAMD1CQ8IYS0 662 aa9.55□□□□□ -0.88
BRCA1-205ENST00000461221 SNF8Q96H20 258 aa9.55□□□□□ -0.88
BRCA1-205ENST00000461221 ZBED2Q9BTP6 218 aa9.55□□□□□ -0.88
BRCA1-205ENST00000461221 USP44Q9H0E7 712 aa9.55□□□□□ -0.88
BRCA1-205ENST00000461221 STAP2Q9UGK3 403 aa9.55□□□□□ -0.88
BRCA1-205ENST00000461221 HEY1Q9Y5J3 304 aa9.55□□□□□ -0.88
BRCA1-205ENST00000461221 KAT6BQ8WYB5 2073 aa9.55□□□□□ -0.88
BRCA1-205ENST00000461221 CLRN2A0PK11 232 aa9.54□□□□□ -0.88
BRCA1-205ENST00000461221 VCAM1P19320 739 aa9.54□□□□□ -0.88
BRCA1-205ENST00000461221 MAP4P27816 1152 aaKnown RBP9.54□□□□□ -0.88
BRCA1-205ENST00000461221 SLC16A2P36021 539 aa9.54□□□□□ -0.88
BRCA1-205ENST00000461221 MAGOHP61326 146 aaKnown RBP9.54□□□□□ -0.88
BRCA1-205ENST00000461221 CYP27A1Q02318 531 aa9.54□□□□□ -0.88
BRCA1-205ENST00000461221 CUL3Q13618 768 aa9.54□□□□□ -0.88
BRCA1-205ENST00000461221 HIC1Q14526 733 aa9.54□□□□□ -0.88
BRCA1-205ENST00000461221 SCFD1Q8WVM8 642 aa9.54□□□□□ -0.88
BRCA1-205ENST00000461221 THAP11Q96EK4 314 aa9.54□□□□□ -0.88
BRCA1-205ENST00000461221 SENP1Q9P0U3 644 aa9.54□□□□□ -0.88
BRCA1-205ENST00000461221 ADAMTS1Q9UHI8 967 aa9.54□□□□□ -0.88
BRCA1-205ENST00000461221 MAFGO15525 162 aa9.54□□□□□ -0.88
BRCA1-205ENST00000461221 SLC9A1P19634 815 aa9.54□□□□□ -0.88
BRCA1-205ENST00000461221 RANBP1P43487 201 aa9.54□□□□□ -0.88
BRCA1-205ENST00000461221 GPC3P51654 580 aa9.54□□□□□ -0.88
BRCA1-205ENST00000461221 THEMIS2Q5TEJ8 643 aa9.54□□□□□ -0.88
BRCA1-205ENST00000461221 KCNV2Q8TDN2 545 aa9.54□□□□□ -0.88
BRCA1-205ENST00000461221 COG1Q8WTW3 980 aa9.54□□□□□ -0.88
BRCA1-205ENST00000461221 OTULINQ96BN8 352 aa9.54□□□□□ -0.88
BRCA1-205ENST00000461221 MRGBPQ9NV56 204 aa9.54□□□□□ -0.88
BRCA1-205ENST00000461221 ZNF711Q9Y462 761 aa9.54□□□□□ -0.88
BRCA1-205ENST00000461221 SYCP2Q9BX26 1530 aa9.54□□□□□ -0.88
BRCA1-205ENST00000461221 SPDYE5A6NIY4 337 aa9.54□□□□□ -0.88
BRCA1-205ENST00000461221 ANGPT2O15123 496 aa9.54□□□□□ -0.88
BRCA1-205ENST00000461221 FOXP2O15409 715 aa9.54□□□□□ -0.88
BRCA1-205ENST00000461221 TBC1D4O60343 1298 aa9.54□□□□□ -0.88
BRCA1-205ENST00000461221 GDF11O95390 407 aa9.54□□□□□ -0.88
BRCA1-205ENST00000461221 FAM107AO95990 144 aa9.54□□□□□ -0.88
BRCA1-205ENST00000461221 TAP1Q03518 808 aa9.54□□□□□ -0.88
BRCA1-205ENST00000461221 RUNX1T1Q06455 604 aa9.54□□□□□ -0.88
BRCA1-205ENST00000461221 NBPF20Q3BBV1 942 aa9.54□□□□□ -0.88
BRCA1-205ENST00000461221 SPDYE7PQ495Y7 208 aa9.54□□□□□ -0.88
BRCA1-205ENST00000461221 TAS2R42Q7RTR8 314 aa9.54□□□□□ -0.88
BRCA1-205ENST00000461221 COA7Q96BR5 231 aa9.54□□□□□ -0.88
BRCA1-205ENST00000461221 ZFP42Q96MM3 310 aa9.54□□□□□ -0.88
BRCA1-205ENST00000461221 DDX50Q9BQ39 737 aaKnown RBP9.54□□□□□ -0.88
BRCA1-205ENST00000461221 MRPS26Q9BYN8 205 aaKnown RBP9.54□□□□□ -0.88
BRCA1-205ENST00000461221 ZNF556Q9HAH1 456 aa9.54□□□□□ -0.88
BRCA1-205ENST00000461221 FAM32AQ9Y421 112 aaKnown RBP9.54□□□□□ -0.88
BRCA1-205ENST00000461221 YEATS2Q9ULM3 1422 aa9.54□□□□□ -0.88
BRCA1-205ENST00000461221 RPAP1Q9BWH6 1393 aaPredicted RBP9.54□□□□□ -0.88
BRCA1-205ENST00000461221 MYO1CO00159 1063 aa9.54□□□□□ -0.88
BRCA1-205ENST00000461221 MYL3P08590 195 aa9.54□□□□□ -0.88
BRCA1-205ENST00000461221 RALBP11234 206 aa9.54□□□□□ -0.88
BRCA1-205ENST00000461221 BRAFP15056 766 aa9.54□□□□□ -0.88
BRCA1-205ENST00000461221 ADD2P35612 726 aa9.54□□□□□ -0.88
BRCA1-205ENST00000461221 HNRNPH2P55795 449 aaKnown RBP9.54□□□□□ -0.88
BRCA1-205ENST00000461221 PEX3P56589 373 aa9.54□□□□□ -0.88
BRCA1-205ENST00000461221 FASTKD1Q53R41 847 aaKnown RBP9.54□□□□□ -0.88
BRCA1-205ENST00000461221 MTHFD1LQ6UB35 978 aa9.54□□□□□ -0.88
BRCA1-205ENST00000461221 NLRP14Q86W24 1093 aa9.54□□□□□ -0.88
BRCA1-205ENST00000461221 CEP95Q96GE4 821 aa9.54□□□□□ -0.88
BRCA1-205ENST00000461221 FAM129AQ9BZQ8 928 aa9.54□□□□□ -0.88
BRCA1-205ENST00000461221 AIPL1Q9NZN9 384 aa9.54□□□□□ -0.88
BRCA1-205ENST00000461221 PI4KBQ9UBF8 816 aa9.54□□□□□ -0.88
BRCA1-205ENST00000461221 POLIQ9UNA4 740 aa9.54□□□□□ -0.88
BRCA1-205ENST00000461221 CFAP69A5D8W1 941 aa9.53□□□□□ -0.88
BRCA1-205ENST00000461221 STK25O00506 426 aa9.53□□□□□ -0.88
BRCA1-205ENST00000461221 CLDN3O15551 220 aa9.53□□□□□ -0.88
BRCA1-205ENST00000461221 CTTNQ14247 550 aaKnown RBP9.53□□□□□ -0.88
BRCA1-205ENST00000461221 TRIM72Q6ZMU5 477 aa9.53□□□□□ -0.88
BRCA1-205ENST00000461221 TADA1Q96BN2 335 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms