RNA–Protein interactions for RNA: ENST00000461217.1

COL16A1-206, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 3

Gene COL16A1, Length 852 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-206ENST00000461217 SP100P23497 879 aaPredicted RBP16.91■□□□□ 0.3
COL16A1-206ENST00000461217 RAB27AP51159 221 aa16.91■□□□□ 0.3
COL16A1-206ENST00000461217 RNASELQ05823 741 aaKnown RBP16.91■□□□□ 0.3
COL16A1-206ENST00000461217 PPP2R5CQ13362 524 aa16.91■□□□□ 0.3
COL16A1-206ENST00000461217 TMEM184AQ6ZMB5 413 aa16.91■□□□□ 0.3
COL16A1-206ENST00000461217 SUSD6Q92537 303 aa16.91■□□□□ 0.3
COL16A1-206ENST00000461217 GBP3Q9H0R5 595 aa16.91■□□□□ 0.3
COL16A1-206ENST00000461217 KCNMB3Q9NPA1 279 aa16.91■□□□□ 0.3
COL16A1-206ENST00000461217 BMP2KQ9NSY1 1161 aaPredicted RBP16.91■□□□□ 0.3
COL16A1-206ENST00000461217 FAM105AQ9NUU6 356 aa16.91■□□□□ 0.3
COL16A1-206ENST00000461217 VAV3Q9UKW4 847 aa16.91■□□□□ 0.3
COL16A1-206ENST00000461217 COL4A3BPQ9Y5P4 624 aa16.91■□□□□ 0.3
COL16A1-206ENST00000461217 TMEM221A6NGB7 291 aa16.9■□□□□ 0.3
COL16A1-206ENST00000461217 M0R296 226 aa16.9■□□□□ 0.3
COL16A1-206ENST00000461217 DTNBO60941 627 aa16.9■□□□□ 0.3
COL16A1-206ENST00000461217 P4HBP07237 508 aaKnown RBP16.9■□□□□ 0.3
COL16A1-206ENST00000461217 HOXB8P17481 243 aaPredicted RBP16.9■□□□□ 0.3
COL16A1-206ENST00000461217 NPEPPSP55786 919 aa16.9■□□□□ 0.3
COL16A1-206ENST00000461217 KCNC3Q14003 757 aa16.9■□□□□ 0.3
COL16A1-206ENST00000461217 TPRNQ4KMQ1 711 aa16.9■□□□□ 0.3
COL16A1-206ENST00000461217 NCAPH2Q6IBW4 605 aa16.9■□□□□ 0.3
COL16A1-206ENST00000461217 PPP4R3AQ6IN85 833 aa16.9■□□□□ 0.3
COL16A1-206ENST00000461217 SYCE2Q6PIF2 218 aa16.9■□□□□ 0.3
COL16A1-206ENST00000461217 TRIM67Q6ZTA4 783 aa16.9■□□□□ 0.3
COL16A1-206ENST00000461217 ZBTB33Q86T24 672 aa16.9■□□□□ 0.3
COL16A1-206ENST00000461217 EXOC8Q8IYI6 725 aa16.9■□□□□ 0.3
COL16A1-206ENST00000461217 MRPL43Q8N983 215 aaKnown RBP16.9■□□□□ 0.3
COL16A1-206ENST00000461217 RSPH1Q8WYR4 309 aa16.9■□□□□ 0.3
COL16A1-206ENST00000461217 FBXL18Q96ME1 805 aa16.9■□□□□ 0.3
COL16A1-206ENST00000461217 KCNH6Q9H252 994 aa16.9■□□□□ 0.3
COL16A1-206ENST00000461217 GJB4Q9NTQ9 266 aa16.9■□□□□ 0.3
COL16A1-206ENST00000461217 TPCN1Q9ULQ1 816 aa16.9■□□□□ 0.3
COL16A1-206ENST00000461217 HCFC2Q9Y5Z7 792 aa16.9■□□□□ 0.3
COL16A1-206ENST00000461217 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.89■□□□□ 0.29
COL16A1-206ENST00000461217 C2orf71A6NGG8 1288 aa16.89■□□□□ 0.29
COL16A1-206ENST00000461217 PFKFB2O60825 505 aa16.89■□□□□ 0.29
COL16A1-206ENST00000461217 RFC5P40937 340 aa16.89■□□□□ 0.29
COL16A1-206ENST00000461217 ZXDAP98168 799 aa16.89■□□□□ 0.29
COL16A1-206ENST00000461217 NOMO2Q5JPE7 1267 aa16.89■□□□□ 0.29
COL16A1-206ENST00000461217 CES5AQ6NT32 575 aa16.89■□□□□ 0.29
COL16A1-206ENST00000461217 ALYREFQ86V81 257 aaKnown RBP16.89■□□□□ 0.29
COL16A1-206ENST00000461217 POTEDQ86YR6 584 aa16.89■□□□□ 0.29
COL16A1-206ENST00000461217 SUGP1Q8IWZ8 645 aaKnown RBP16.89■□□□□ 0.29
COL16A1-206ENST00000461217 VPS52Q8N1B4 723 aa16.89■□□□□ 0.29
COL16A1-206ENST00000461217 URGCPQ8TCY9 931 aa16.89■□□□□ 0.29
COL16A1-206ENST00000461217 OXER1Q8TDS5 423 aa16.89■□□□□ 0.29
COL16A1-206ENST00000461217 PSPC1Q8WXF1 523 aaKnown RBP16.89■□□□□ 0.29
COL16A1-206ENST00000461217 WASF1Q92558 559 aa16.89■□□□□ 0.29
COL16A1-206ENST00000461217 TMEM143Q96AN5 459 aa16.89■□□□□ 0.29
COL16A1-206ENST00000461217 PBXIP1Q96AQ6 731 aa16.89■□□□□ 0.29
COL16A1-206ENST00000461217 PGBD4Q96DM1 585 aa16.89■□□□□ 0.29
COL16A1-206ENST00000461217 LXNQ9BS40 222 aa16.89■□□□□ 0.29
COL16A1-206ENST00000461217 TRAIPQ9BWF2 469 aa16.89■□□□□ 0.29
COL16A1-206ENST00000461217 S1PR5Q9H228 398 aa16.89■□□□□ 0.29
COL16A1-206ENST00000461217 BRMS1Q9HCU9 246 aa16.89■□□□□ 0.29
COL16A1-206ENST00000461217 TBC1D13Q9NVG8 400 aa16.89■□□□□ 0.29
COL16A1-206ENST00000461217 ORC3Q9UBD5 711 aaPredicted RBP16.89■□□□□ 0.29
COL16A1-206ENST00000461217 CARNS1A5YM72 827 aa16.88■□□□□ 0.29
COL16A1-206ENST00000461217 MEIS3P2A8K0S8 358 aa16.88■□□□□ 0.29
COL16A1-206ENST00000461217 K7ELQ4 463 aaPredicted RBP16.88■□□□□ 0.29
COL16A1-206ENST00000461217 TBX3O15119 743 aa16.88■□□□□ 0.29
COL16A1-206ENST00000461217 BAG4O95429 457 aaKnown RBP16.88■□□□□ 0.29
COL16A1-206ENST00000461217 CXCL14O95715 111 aa16.88■□□□□ 0.29
COL16A1-206ENST00000461217 SRGAP2CP0DJJ0 459 aa16.88■□□□□ 0.29
COL16A1-206ENST00000461217 YWHABP31946 246 aaKnown RBP16.88■□□□□ 0.29
COL16A1-206ENST00000461217 EPHA7Q15375 998 aa16.88■□□□□ 0.29
COL16A1-206ENST00000461217 OTUD6AQ7L8S5 288 aa16.88■□□□□ 0.29
COL16A1-206ENST00000461217 ZNF579Q8NAF0 562 aaKnown RBP16.88■□□□□ 0.29
COL16A1-206ENST00000461217 TCP11Q8WWU5 503 aa16.88■□□□□ 0.29
COL16A1-206ENST00000461217 AUTS2Q8WXX7 1259 aa16.88■□□□□ 0.29
COL16A1-206ENST00000461217 IFT122Q9HBG6 1241 aa16.88■□□□□ 0.29
COL16A1-206ENST00000461217 AGPAT5Q9NUQ2 364 aa16.88■□□□□ 0.29
COL16A1-206ENST00000461217 WRAP73Q9P2S5 460 aaPredicted RBP16.88■□□□□ 0.29
COL16A1-206ENST00000461217 PPME1Q9Y570 386 aa16.88■□□□□ 0.29
COL16A1-206ENST00000461217 CLASP2O75122 1294 aaKnown RBP16.87■□□□□ 0.29
COL16A1-206ENST00000461217 KRT2P35908 639 aa16.87■□□□□ 0.29
COL16A1-206ENST00000461217 CYP4A11Q02928 519 aa16.87■□□□□ 0.29
COL16A1-206ENST00000461217 CTTNQ14247 550 aaKnown RBP16.87■□□□□ 0.29
COL16A1-206ENST00000461217 EMC2Q15006 297 aa16.87■□□□□ 0.29
COL16A1-206ENST00000461217 XKR9Q5GH70 373 aa16.87■□□□□ 0.29
COL16A1-206ENST00000461217 SRGAP1Q7Z6B7 1085 aa16.87■□□□□ 0.29
COL16A1-206ENST00000461217 TMEM173Q86WV6 379 aaPredicted RBP16.87■□□□□ 0.29
COL16A1-206ENST00000461217 C4orf19Q8IY42 314 aa16.87■□□□□ 0.29
COL16A1-206ENST00000461217 SLFN12Q8IYM2 578 aa16.87■□□□□ 0.29
COL16A1-206ENST00000461217 PRPF31Q8WWY3 499 aaKnown RBP16.87■□□□□ 0.29
COL16A1-206ENST00000461217 HAS1Q92839 578 aa16.87■□□□□ 0.29
COL16A1-206ENST00000461217 IGSF21Q96ID5 467 aa16.87■□□□□ 0.29
COL16A1-206ENST00000461217 DYDC2Q96IM9 177 aa16.87■□□□□ 0.29
COL16A1-206ENST00000461217 ZSCAN31Q96LW9 406 aaPredicted RBP16.87■□□□□ 0.29
COL16A1-206ENST00000461217 FAM193BQ96PV7 902 aaPredicted RBP16.87■□□□□ 0.29
COL16A1-206ENST00000461217 ZBP1Q9H171 429 aa16.87■□□□□ 0.29
COL16A1-206ENST00000461217 DHX33Q9H6R0 707 aaKnown RBP16.87■□□□□ 0.29
COL16A1-206ENST00000461217 NRDE2Q9H7Z3 1164 aa16.87■□□□□ 0.29
COL16A1-206ENST00000461217 RGL1Q9NZL6 768 aa16.87■□□□□ 0.29
COL16A1-206ENST00000461217 CDH22Q9UJ99 828 aa16.87■□□□□ 0.29
COL16A1-206ENST00000461217 LIMCH1Q9UPQ0 1083 aa16.87■□□□□ 0.29
COL16A1-206ENST00000461217 NR2E1Q9Y466 385 aa16.87■□□□□ 0.29
COL16A1-206ENST00000461217 PCDHB2Q9Y5E7 798 aa16.87■□□□□ 0.29
COL16A1-206ENST00000461217 SPDYE4A6NLX3 237 aa16.86■□□□□ 0.29
COL16A1-206ENST00000461217 ZNF623O75123 536 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms