RNA–Protein interactions for RNA: ENST00000460739.5

SOX2-OT-201, SOX2 overlapping transcript, humanhuman

TSL 4 BASIC

Gene SOX2-OT, Length 609 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-201ENST00000460739 LAMTOR4Q0VGL1 99 aa13.18□□□□□ -0.3
SOX2-OT-201ENST00000460739 EMC2Q15006 297 aa13.18□□□□□ -0.3
SOX2-OT-201ENST00000460739 CLUL1Q15846 466 aa13.18□□□□□ -0.3
SOX2-OT-201ENST00000460739 C8orf34Q49A92 452 aa13.18□□□□□ -0.3
SOX2-OT-201ENST00000460739 SRGAP1Q7Z6B7 1085 aa13.18□□□□□ -0.3
SOX2-OT-201ENST00000460739 FERMT3Q86UX7 667 aa13.18□□□□□ -0.3
SOX2-OT-201ENST00000460739 CCDC83Q8IWF9 413 aa13.18□□□□□ -0.3
SOX2-OT-201ENST00000460739 ADHFE1Q8IWW8 467 aa13.18□□□□□ -0.3
SOX2-OT-201ENST00000460739 MICAL1Q8TDZ2 1067 aa13.18□□□□□ -0.3
SOX2-OT-201ENST00000460739 CDCA3Q99618 268 aaPredicted RBP13.18□□□□□ -0.3
SOX2-OT-201ENST00000460739 KIF2CQ99661 725 aa13.18□□□□□ -0.3
SOX2-OT-201ENST00000460739 TLE6Q9H808 572 aa13.18□□□□□ -0.3
SOX2-OT-201ENST00000460739 ANKEF1Q9NU02 776 aa13.18□□□□□ -0.3
SOX2-OT-201ENST00000460739 AGPAT5Q9NUQ2 364 aa13.18□□□□□ -0.3
SOX2-OT-201ENST00000460739 FAM105AQ9NUU6 356 aa13.18□□□□□ -0.3
SOX2-OT-201ENST00000460739 SPG21Q9NZD8 308 aa13.18□□□□□ -0.3
SOX2-OT-201ENST00000460739 PUF60Q9UHX1 559 aaKnown RBP13.18□□□□□ -0.3
SOX2-OT-201ENST00000460739 SRGAP2CP0DJJ0 459 aa13.17□□□□□ -0.3
SOX2-OT-201ENST00000460739 PBX3P40426 434 aa13.17□□□□□ -0.3
SOX2-OT-201ENST00000460739 GUCY1B3Q02153 619 aa13.17□□□□□ -0.3
SOX2-OT-201ENST00000460739 KRT17Q04695 432 aa13.17□□□□□ -0.3
SOX2-OT-201ENST00000460739 COASYQ13057 564 aa13.17□□□□□ -0.3
SOX2-OT-201ENST00000460739 SAFBQ15424 915 aaKnown RBP eCLIP13.17□□□□□ -0.3
SOX2-OT-201ENST00000460739 DUSP6Q16828 381 aa13.17□□□□□ -0.3
SOX2-OT-201ENST00000460739 SLC39A11Q8N1S5 342 aa13.17□□□□□ -0.3
SOX2-OT-201ENST00000460739 SMRP1Q8NCR6 262 aa13.17□□□□□ -0.3
SOX2-OT-201ENST00000460739 C8orf76Q96K31 380 aa13.17□□□□□ -0.3
SOX2-OT-201ENST00000460739 ZSCAN31Q96LW9 406 aaPredicted RBP13.17□□□□□ -0.3
SOX2-OT-201ENST00000460739 MTRQ99707 1265 aa13.17□□□□□ -0.3
SOX2-OT-201ENST00000460739 MINDY3Q9H8M7 445 aa13.17□□□□□ -0.3
SOX2-OT-201ENST00000460739 XPNPEP1Q9NQW7 623 aa13.17□□□□□ -0.3
SOX2-OT-201ENST00000460739 BMP2KQ9NSY1 1161 aaPredicted RBP13.17□□□□□ -0.3
SOX2-OT-201ENST00000460739 PER2O15055 1255 aa13.16□□□□□ -0.3
SOX2-OT-201ENST00000460739 GPR37L1O60883 481 aa13.16□□□□□ -0.3
SOX2-OT-201ENST00000460739 DGAT1O75907 488 aa13.16□□□□□ -0.3
SOX2-OT-201ENST00000460739 HOXA11P31270 313 aaPredicted RBP13.16□□□□□ -0.3
SOX2-OT-201ENST00000460739 ALDH7A1P49419 539 aaKnown RBP13.16□□□□□ -0.3
SOX2-OT-201ENST00000460739 BCAR1P56945 870 aa13.16□□□□□ -0.3
SOX2-OT-201ENST00000460739 HMGN5P82970 282 aaKnown RBP13.16□□□□□ -0.3
SOX2-OT-201ENST00000460739 POU5F1BQ06416 359 aa13.16□□□□□ -0.3
SOX2-OT-201ENST00000460739 ORC2Q13416 577 aaPredicted RBP13.16□□□□□ -0.3
SOX2-OT-201ENST00000460739 KCNC3Q14003 757 aa13.16□□□□□ -0.3
SOX2-OT-201ENST00000460739 MXD4Q14582 209 aaPredicted RBP13.16□□□□□ -0.3
SOX2-OT-201ENST00000460739 PCBP1Q15365 356 aaKnown RBP eCLIP13.16□□□□□ -0.3
SOX2-OT-201ENST00000460739 GLB1LQ6UWU2 654 aa13.16□□□□□ -0.3
SOX2-OT-201ENST00000460739 RNF149Q8NC42 400 aa13.16□□□□□ -0.3
SOX2-OT-201ENST00000460739 FBXO18Q8NFZ0 1043 aa13.16□□□□□ -0.3
SOX2-OT-201ENST00000460739 LPPQ93052 612 aa13.16□□□□□ -0.3
SOX2-OT-201ENST00000460739 POP1Q99575 1024 aaKnown RBP13.16□□□□□ -0.3
SOX2-OT-201ENST00000460739 TCF25Q9BQ70 676 aa13.16□□□□□ -0.3
SOX2-OT-201ENST00000460739 TMEM60Q9H2L4 133 aa13.16□□□□□ -0.3
SOX2-OT-201ENST00000460739 FOXP1Q9H334 677 aaPredicted RBP13.16□□□□□ -0.3
SOX2-OT-201ENST00000460739 NGRNQ9NPE2 291 aaKnown RBP13.16□□□□□ -0.3
SOX2-OT-201ENST00000460739 C11orf16Q9NQ32 467 aa13.16□□□□□ -0.3
SOX2-OT-201ENST00000460739 ENTPD7Q9NQZ7 604 aa13.16□□□□□ -0.3
SOX2-OT-201ENST00000460739 SH2B1Q9NRF2 756 aaPredicted RBP13.16□□□□□ -0.3
SOX2-OT-201ENST00000460739 PCDHB2Q9Y5E7 798 aa13.16□□□□□ -0.3
SOX2-OT-201ENST00000460739 CARNS1A5YM72 827 aa13.15□□□□□ -0.3
SOX2-OT-201ENST00000460739 POTEMA6NI47 508 aa13.15□□□□□ -0.3
SOX2-OT-201ENST00000460739 MEIS3P2A8K0S8 358 aa13.15□□□□□ -0.3
SOX2-OT-201ENST00000460739 OFD1O75665 1012 aa13.15□□□□□ -0.3
SOX2-OT-201ENST00000460739 XRCC6P12956 609 aaKnown RBP eCLIP13.15□□□□□ -0.3
SOX2-OT-201ENST00000460739 MCM7P33993 719 aa13.15□□□□□ -0.3
SOX2-OT-201ENST00000460739 PTENP60484 403 aa13.15□□□□□ -0.3
SOX2-OT-201ENST00000460739 LONRF3Q496Y0 759 aa13.15□□□□□ -0.3
SOX2-OT-201ENST00000460739 NOMO2Q5JPE7 1267 aa13.15□□□□□ -0.3
SOX2-OT-201ENST00000460739 TMEM31Q5JXX7 168 aa13.15□□□□□ -0.3
SOX2-OT-201ENST00000460739 UBXN11Q5T124 520 aa13.15□□□□□ -0.3
SOX2-OT-201ENST00000460739 PLPP4Q5VZY2 271 aa13.15□□□□□ -0.3
SOX2-OT-201ENST00000460739 TMEM184AQ6ZMB5 413 aa13.15□□□□□ -0.3
SOX2-OT-201ENST00000460739 MRPL10Q7Z7H8 261 aaKnown RBP13.15□□□□□ -0.3
SOX2-OT-201ENST00000460739 IFNLR1Q8IU57 520 aaPredicted RBP13.15□□□□□ -0.3
SOX2-OT-201ENST00000460739 VN1R2Q8NFZ6 395 aa13.15□□□□□ -0.3
SOX2-OT-201ENST00000460739 PGBD4Q96DM1 585 aa13.15□□□□□ -0.3
SOX2-OT-201ENST00000460739 LRFN3Q9BTN0 628 aa13.15□□□□□ -0.3
SOX2-OT-201ENST00000460739 TBC1D13Q9NVG8 400 aa13.15□□□□□ -0.3
SOX2-OT-201ENST00000460739 BARX2Q9UMQ3 279 aaPredicted RBP13.15□□□□□ -0.3
SOX2-OT-201ENST00000460739 TDRD15B5MCY1 1934 aaKnown RBP13.14□□□□□ -0.31
SOX2-OT-201ENST00000460739 HIDE1A8MVS5 230 aa13.14□□□□□ -0.31
SOX2-OT-201ENST00000460739 SPATA31C1P0DKV0 1188 aa13.14□□□□□ -0.31
SOX2-OT-201ENST00000460739 ALADP13716 330 aa13.14□□□□□ -0.31
SOX2-OT-201ENST00000460739 ATP2B1P20020 1258 aa13.14□□□□□ -0.31
SOX2-OT-201ENST00000460739 ARL2P36404 184 aa13.14□□□□□ -0.31
SOX2-OT-201ENST00000460739 RBM25P49756 843 aaKnown RBP13.14□□□□□ -0.31
SOX2-OT-201ENST00000460739 RARRES1P49788 294 aa13.14□□□□□ -0.31
SOX2-OT-201ENST00000460739 RBM10P98175 930 aaKnown RBP13.14□□□□□ -0.31
SOX2-OT-201ENST00000460739 TFDP1Q14186 410 aa13.14□□□□□ -0.31
SOX2-OT-201ENST00000460739 AGMOQ6ZNB7 445 aa13.14□□□□□ -0.31
SOX2-OT-201ENST00000460739 TMC7Q7Z402 723 aa13.14□□□□□ -0.31
SOX2-OT-201ENST00000460739 CATSPER3Q86XQ3 398 aa13.14□□□□□ -0.31
SOX2-OT-201ENST00000460739 PIGOQ8TEQ8 1089 aa13.14□□□□□ -0.31
SOX2-OT-201ENST00000460739 CCDC43Q96MW1 224 aaKnown RBP13.14□□□□□ -0.31
SOX2-OT-201ENST00000460739 NFKBIZQ9BYH8 718 aa13.14□□□□□ -0.31
SOX2-OT-201ENST00000460739 NRDE2Q9H7Z3 1164 aa13.14□□□□□ -0.31
SOX2-OT-201ENST00000460739 TUFT1Q9NNX1 390 aa13.14□□□□□ -0.31
SOX2-OT-201ENST00000460739 CNTNAP2Q9UHC6 1331 aa13.13□□□□□ -0.31
SOX2-OT-201ENST00000460739 TRIOO75962 3097 aa13.13□□□□□ -0.31
SOX2-OT-201ENST00000460739 NT5C1B-RDH14C9J2C7 533 aa13.13□□□□□ -0.31
SOX2-OT-201ENST00000460739 TSPAN1O60635 241 aa13.13□□□□□ -0.31
SOX2-OT-201ENST00000460739 ZC3H11AO75152 810 aaKnown RBP eCLIP13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms