RNA–Protein interactions for RNA: ENST00000460616.5

SSR4-206, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2

Gene SSR4, Length 2,482 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-206ENST00000460616 RIMBP2O15034 1052 aa16.71■□□□□ 0.27
SSR4-206ENST00000460616 DDX3YO15523 660 aaKnown RBP16.71■□□□□ 0.27
SSR4-206ENST00000460616 FESP07332 822 aa16.71■□□□□ 0.27
SSR4-206ENST00000460616 TSPY3P0CV98 308 aa16.71■□□□□ 0.27
SSR4-206ENST00000460616 TSPY8P0CW00 308 aa16.71■□□□□ 0.27
SSR4-206ENST00000460616 ATP4AP20648 1035 aa16.71■□□□□ 0.27
SSR4-206ENST00000460616 GALCP54803 685 aa16.71■□□□□ 0.27
SSR4-206ENST00000460616 MAPK7Q13164 816 aa16.71■□□□□ 0.27
SSR4-206ENST00000460616 NBPF20Q3BBV1 942 aa16.71■□□□□ 0.27
SSR4-206ENST00000460616 TNFAIP8L3Q5GJ75 292 aa16.71■□□□□ 0.27
SSR4-206ENST00000460616 UBAP2Q5T6F2 1119 aaKnown RBP16.71■□□□□ 0.27
SSR4-206ENST00000460616 DPP8Q6V1X1 898 aaPredicted RBP16.71■□□□□ 0.27
SSR4-206ENST00000460616 EXOC3L1Q86VI1 746 aa16.71■□□□□ 0.27
SSR4-206ENST00000460616 DYNLL2Q96FJ2 89 aa16.71■□□□□ 0.27
SSR4-206ENST00000460616 TMEM47Q9BQJ4 181 aa16.71■□□□□ 0.27
SSR4-206ENST00000460616 MYH4Q9Y623 1939 aa16.71■□□□□ 0.27
SSR4-206ENST00000460616 O00370 1275 aa16.71■□□□□ 0.26
SSR4-206ENST00000460616 HIP1RO75146 1068 aa16.71■□□□□ 0.26
SSR4-206ENST00000460616 AP1G2O75843 785 aa16.71■□□□□ 0.26
SSR4-206ENST00000460616 GJB6O95452 261 aa16.71■□□□□ 0.26
SSR4-206ENST00000460616 HERC4Q5GLZ8 1057 aaPredicted RBP16.71■□□□□ 0.26
SSR4-206ENST00000460616 CCDC65Q8IXS2 484 aa16.71■□□□□ 0.26
SSR4-206ENST00000460616 SLC35G2Q8TBE7 412 aa16.71■□□□□ 0.26
SSR4-206ENST00000460616 SCFD1Q8WVM8 642 aa16.71■□□□□ 0.26
SSR4-206ENST00000460616 SPZ1Q9BXG8 430 aa16.71■□□□□ 0.26
SSR4-206ENST00000460616 VAT1LQ9HCJ6 419 aa16.71■□□□□ 0.26
SSR4-206ENST00000460616 MTRF1LQ9UGC7 380 aaKnown RBP16.71■□□□□ 0.26
SSR4-206ENST00000460616 JAG2Q9Y219 1238 aa16.71■□□□□ 0.26
SSR4-206ENST00000460616 ATP8B3O60423 1300 aa16.71■□□□□ 0.26
SSR4-206ENST00000460616 EIF4E1BA6NMX2 242 aaKnown RBP16.7■□□□□ 0.26
SSR4-206ENST00000460616 AHCYL1O43865 530 aa16.7■□□□□ 0.26
SSR4-206ENST00000460616 TDP2O95551 362 aa16.7■□□□□ 0.26
SSR4-206ENST00000460616 AFPP02771 609 aaKnown RBP16.7■□□□□ 0.26
SSR4-206ENST00000460616 NEFHP12036 1026 aa16.7■□□□□ 0.26
SSR4-206ENST00000460616 TRIM68Q6AZZ1 485 aa16.7■□□□□ 0.26
SSR4-206ENST00000460616 SPATA21Q7Z572 469 aa16.7■□□□□ 0.26
SSR4-206ENST00000460616 TRIM7Q9C029 511 aa16.7■□□□□ 0.26
SSR4-206ENST00000460616 CARD9Q9H257 536 aa16.7■□□□□ 0.26
SSR4-206ENST00000460616 GRHL1Q9NZI5 618 aa16.7■□□□□ 0.26
SSR4-206ENST00000460616 CPSF2Q9P2I0 782 aaKnown RBP16.7■□□□□ 0.26
SSR4-206ENST00000460616 SEC63Q9UGP8 760 aaKnown RBP16.7■□□□□ 0.26
SSR4-206ENST00000460616 PCDHA2Q9Y5H9 948 aa16.7■□□□□ 0.26
SSR4-206ENST00000460616 RIPK2O43353 540 aa16.7■□□□□ 0.26
SSR4-206ENST00000460616 KRT13P13646 458 aa16.7■□□□□ 0.26
SSR4-206ENST00000460616 FGFR4P22455 802 aa16.7■□□□□ 0.26
SSR4-206ENST00000460616 ATP2B4P23634 1241 aa16.7■□□□□ 0.26
SSR4-206ENST00000460616 NR2F2P24468 414 aa16.7■□□□□ 0.26
SSR4-206ENST00000460616 ZNF211Q13398 564 aaPredicted RBP16.7■□□□□ 0.26
SSR4-206ENST00000460616 SLC30A9Q6PML9 568 aa16.7■□□□□ 0.26
SSR4-206ENST00000460616 MAEAQ7L5Y9 396 aa16.7■□□□□ 0.26
SSR4-206ENST00000460616 ARMCX3Q9UH62 379 aaPredicted RBP16.7■□□□□ 0.26
SSR4-206ENST00000460616 FER1L6Q2WGJ9 1857 aa16.69■□□□□ 0.26
SSR4-206ENST00000460616 CTCFP49711 727 aaPredicted RBP16.69■□□□□ 0.26
SSR4-206ENST00000460616 PLS1Q14651 629 aa16.69■□□□□ 0.26
SSR4-206ENST00000460616 EDRF1Q3B7T1 1238 aa16.69■□□□□ 0.26
SSR4-206ENST00000460616 C12orf60Q5U649 245 aa16.69■□□□□ 0.26
SSR4-206ENST00000460616 ZC3H3Q8IXZ2 948 aaKnown RBP16.69■□□□□ 0.26
SSR4-206ENST00000460616 ZNF444Q8N0Y2 327 aaPredicted RBP16.69■□□□□ 0.26
SSR4-206ENST00000460616 BCS1LQ9Y276 419 aa16.69■□□□□ 0.26
SSR4-206ENST00000460616 ARFGEF1Q9Y6D6 1849 aa16.69■□□□□ 0.26
SSR4-206ENST00000460616 MPHOSPH10O00566 681 aaKnown RBP16.69■□□□□ 0.26
SSR4-206ENST00000460616 WFS1O76024 890 aa16.69■□□□□ 0.26
SSR4-206ENST00000460616 UPP2O95045 317 aa16.69■□□□□ 0.26
SSR4-206ENST00000460616 GBP1P32455 592 aa16.69■□□□□ 0.26
SSR4-206ENST00000460616 RPL21P46778 160 aaKnown RBP16.69■□□□□ 0.26
SSR4-206ENST00000460616 FRMD5Q7Z6J6 570 aa16.69■□□□□ 0.26
SSR4-206ENST00000460616 FBXO33Q7Z6M2 555 aa16.69■□□□□ 0.26
SSR4-206ENST00000460616 C18orf8Q96DM3 657 aa16.69■□□□□ 0.26
SSR4-206ENST00000460616 RAB3IPQ96QF0 476 aaPredicted RBP16.69■□□□□ 0.26
SSR4-206ENST00000460616 PARP2Q9UGN5 583 aa16.69■□□□□ 0.26
SSR4-206ENST00000460616 LRRC42Q9Y546 428 aa16.69■□□□□ 0.26
SSR4-206ENST00000460616 DPPA5A6NC42 116 aa16.68■□□□□ 0.26
SSR4-206ENST00000460616 CACNB1Q02641 598 aaPredicted RBP16.68■□□□□ 0.26
SSR4-206ENST00000460616 DIXDC1Q155Q3 683 aa16.68■□□□□ 0.26
SSR4-206ENST00000460616 CLUL1Q15846 466 aa16.68■□□□□ 0.26
SSR4-206ENST00000460616 DALRD3Q5D0E6 543 aaKnown RBP16.68■□□□□ 0.26
SSR4-206ENST00000460616 MFSD5Q6N075 450 aa16.68■□□□□ 0.26
SSR4-206ENST00000460616 PPP4R3CPQ6ZMV5 832 aa16.68■□□□□ 0.26
SSR4-206ENST00000460616 OTUD6AQ7L8S5 288 aa16.68■□□□□ 0.26
SSR4-206ENST00000460616 PRKAG3Q9UGI9 489 aa16.68■□□□□ 0.26
SSR4-206ENST00000460616 NPHP3-ACAD11A0A0J9YXS1 232 aa16.68■□□□□ 0.26
SSR4-206ENST00000460616 TMEM120BA0PK00 339 aa16.68■□□□□ 0.26
SSR4-206ENST00000460616 PODXLO00592 558 aa16.68■□□□□ 0.26
SSR4-206ENST00000460616 HGSO14964 777 aaPredicted RBP16.68■□□□□ 0.26
SSR4-206ENST00000460616 RARGP13631 454 aa16.68■□□□□ 0.26
SSR4-206ENST00000460616 CCNB1P14635 433 aa16.68■□□□□ 0.26
SSR4-206ENST00000460616 HIBADHP31937 336 aaKnown RBP16.68■□□□□ 0.26
SSR4-206ENST00000460616 PTGIRP43119 386 aa16.68■□□□□ 0.26
SSR4-206ENST00000460616 PPATQ06203 517 aa16.68■□□□□ 0.26
SSR4-206ENST00000460616 TSC22D3Q99576 134 aa16.68■□□□□ 0.26
SSR4-206ENST00000460616 ROPN1BQ9BZX4 212 aaPredicted RBP16.68■□□□□ 0.26
SSR4-206ENST00000460616 ROPN1Q9HAT0 212 aaPredicted RBP16.68■□□□□ 0.26
SSR4-206ENST00000460616 ETNK1Q9HBU6 452 aa16.68■□□□□ 0.26
SSR4-206ENST00000460616 SCN9AQ15858 1988 aa16.67■□□□□ 0.26
SSR4-206ENST00000460616 SMIM24O75264 130 aa16.67■□□□□ 0.26
SSR4-206ENST00000460616 XRCC5P13010 732 aaKnown RBP16.67■□□□□ 0.26
SSR4-206ENST00000460616 FERP16591 822 aa16.67■□□□□ 0.26
SSR4-206ENST00000460616 NT5C2P49902 561 aa16.67■□□□□ 0.26
SSR4-206ENST00000460616 PAPOLAP51003 745 aaKnown RBP16.67■□□□□ 0.26
SSR4-206ENST00000460616 JAM2P57087 298 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms