RNA–Protein interactions for RNA: ENST00000460514.1

ABCA4-202, Transcript of ATP binding cassette subfamily A member 4, humanhuman

TSL 5

Gene ABCA4, Length 690 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4-202ENST00000460514 RAD51AP2Q09MP3 1159 aa8.38□□□□□ -1.07
ABCA4-202ENST00000460514 DPYDQ12882 1025 aa8.38□□□□□ -1.07
ABCA4-202ENST00000460514 PNOCQ13519 176 aa8.38□□□□□ -1.07
ABCA4-202ENST00000460514 CUL4BQ13620 913 aa8.38□□□□□ -1.07
ABCA4-202ENST00000460514 KCNB1Q14721 858 aa8.38□□□□□ -1.07
ABCA4-202ENST00000460514 CAMK4Q16566 473 aa8.38□□□□□ -1.07
ABCA4-202ENST00000460514 HERC4Q5GLZ8 1057 aaPredicted RBP8.38□□□□□ -1.07
ABCA4-202ENST00000460514 ODR4Q5SWX8 454 aa8.38□□□□□ -1.07
ABCA4-202ENST00000460514 CAVIN1Q6NZI2 390 aaKnown RBP8.38□□□□□ -1.07
ABCA4-202ENST00000460514 RHPN2Q8IUC4 686 aa8.38□□□□□ -1.07
ABCA4-202ENST00000460514 ZBTB8OSQ8IWT0 167 aa8.38□□□□□ -1.07
ABCA4-202ENST00000460514 FAM178BQ8IXR5 827 aa8.38□□□□□ -1.07
ABCA4-202ENST00000460514 FAM126BQ8IXS8 530 aa8.38□□□□□ -1.07
ABCA4-202ENST00000460514 GRAMD1CQ8IYS0 662 aa8.38□□□□□ -1.07
ABCA4-202ENST00000460514 LRRC71Q8N4P6 559 aa8.38□□□□□ -1.07
ABCA4-202ENST00000460514 TRIML1Q8N9V2 468 aa8.38□□□□□ -1.07
ABCA4-202ENST00000460514 DEPTORQ8TB45 409 aa8.38□□□□□ -1.07
ABCA4-202ENST00000460514 DIS3LQ8TF46 1054 aaKnown RBP8.38□□□□□ -1.07
ABCA4-202ENST00000460514 SPIRE2Q8WWL2 714 aa8.38□□□□□ -1.07
ABCA4-202ENST00000460514 TMEM143Q96AN5 459 aa8.38□□□□□ -1.07
ABCA4-202ENST00000460514 DNAJC19Q96DA6 116 aa8.38□□□□□ -1.07
ABCA4-202ENST00000460514 HTATIP2Q9BUP3 242 aa8.38□□□□□ -1.07
ABCA4-202ENST00000460514 INO80BQ9C086 356 aaPredicted RBP8.38□□□□□ -1.07
ABCA4-202ENST00000460514 FAM49AQ9H0Q0 323 aaPredicted RBP8.38□□□□□ -1.07
ABCA4-202ENST00000460514 C2orf40Q9H1Z8 148 aa8.38□□□□□ -1.07
ABCA4-202ENST00000460514 XPNPEP1Q9NQW7 623 aa8.38□□□□□ -1.07
ABCA4-202ENST00000460514 KIAA1468Q9P260 1216 aa8.38□□□□□ -1.07
ABCA4-202ENST00000460514 MYH11P35749 1972 aa8.37□□□□□ -1.07
ABCA4-202ENST00000460514 NPHP3-ACAD11A0A0J9YXS1 232 aa8.37□□□□□ -1.07
ABCA4-202ENST00000460514 FRMD3A2A2Y4 597 aa8.37□□□□□ -1.07
ABCA4-202ENST00000460514 LRRIQ4A6NIV6 560 aa8.37□□□□□ -1.07
ABCA4-202ENST00000460514 CCDC169A6NNP5 214 aa8.37□□□□□ -1.07
ABCA4-202ENST00000460514 RHOBTB3O94955 611 aa8.37□□□□□ -1.07
ABCA4-202ENST00000460514 PARNO95453 639 aaKnown RBP8.37□□□□□ -1.07
ABCA4-202ENST00000460514 CD4P01730 458 aa8.37□□□□□ -1.07
ABCA4-202ENST00000460514 EFNA5P52803 228 aa8.37□□□□□ -1.07
ABCA4-202ENST00000460514 PEX3P56589 373 aa8.37□□□□□ -1.07
ABCA4-202ENST00000460514 MRPS6P82932 125 aaKnown RBP8.37□□□□□ -1.07
ABCA4-202ENST00000460514 ZNF200P98182 395 aaPredicted RBP8.37□□□□□ -1.07
ABCA4-202ENST00000460514 TLE2Q04725 743 aa8.37□□□□□ -1.07
ABCA4-202ENST00000460514 NCBP1Q09161 790 aaKnown RBP8.37□□□□□ -1.07
ABCA4-202ENST00000460514 LAMTOR4Q0VGL1 99 aa8.37□□□□□ -1.07
ABCA4-202ENST00000460514 COASYQ13057 564 aa8.37□□□□□ -1.07
ABCA4-202ENST00000460514 MAPK7Q13164 816 aa8.37□□□□□ -1.07
ABCA4-202ENST00000460514 STIM1Q13586 685 aa8.37□□□□□ -1.07
ABCA4-202ENST00000460514 PCBP1Q15365 356 aaKnown RBP eCLIP8.37□□□□□ -1.07
ABCA4-202ENST00000460514 TRIM60Q495X7 471 aa8.37□□□□□ -1.07
ABCA4-202ENST00000460514 KMT5BQ4FZB7 885 aa8.37□□□□□ -1.07
ABCA4-202ENST00000460514 FAM26FQ5R3K3 315 aa8.37□□□□□ -1.07
ABCA4-202ENST00000460514 NT5DC1Q5TFE4 455 aa8.37□□□□□ -1.07
ABCA4-202ENST00000460514 SASS6Q6UVJ0 657 aa8.37□□□□□ -1.07
ABCA4-202ENST00000460514 FAM43BQ6ZT52 329 aaPredicted RBP8.37□□□□□ -1.07
ABCA4-202ENST00000460514 KIAA0319LQ8IZA0 1049 aa8.37□□□□□ -1.07
ABCA4-202ENST00000460514 LINC01465Q8N7H1 131 aa8.37□□□□□ -1.07
ABCA4-202ENST00000460514 SPATA20Q8TB22 786 aa8.37□□□□□ -1.07
ABCA4-202ENST00000460514 DNAJB3Q8WWF6 145 aa8.37□□□□□ -1.07
ABCA4-202ENST00000460514 PRPF31Q8WWY3 499 aaKnown RBP8.37□□□□□ -1.07
ABCA4-202ENST00000460514 NLRP7Q8WX94 980 aa8.37□□□□□ -1.07
ABCA4-202ENST00000460514 HVCN1Q96D96 273 aa8.37□□□□□ -1.07
ABCA4-202ENST00000460514 NLRP4Q96MN2 994 aa8.37□□□□□ -1.07
ABCA4-202ENST00000460514 NFKBIZQ9BYH8 718 aa8.37□□□□□ -1.07
ABCA4-202ENST00000460514 GCOM2Q9BZD3 368 aaPredicted RBP8.37□□□□□ -1.07
ABCA4-202ENST00000460514 TRPV6Q9H1D0 765 aa8.37□□□□□ -1.07
ABCA4-202ENST00000460514 MRPL44Q9H9J2 332 aaKnown RBP8.37□□□□□ -1.07
ABCA4-202ENST00000460514 GPRC5CQ9NQ84 441 aa8.37□□□□□ -1.07
ABCA4-202ENST00000460514 KMT5AQ9NQR1 393 aa8.37□□□□□ -1.07
ABCA4-202ENST00000460514 OLFML3Q9NRN5 406 aa8.37□□□□□ -1.07
ABCA4-202ENST00000460514 TRMT13Q9NUP7 481 aaKnown RBP8.37□□□□□ -1.07
ABCA4-202ENST00000460514 DACH1Q9UI36 760 aa8.37□□□□□ -1.07
ABCA4-202ENST00000460514 ATP11BQ9Y2G3 1177 aa8.37□□□□□ -1.07
ABCA4-202ENST00000460514 PCDHA5Q9Y5H7 936 aa8.37□□□□□ -1.07
ABCA4-202ENST00000460514 TRPV2Q9Y5S1 764 aa8.37□□□□□ -1.07
ABCA4-202ENST00000460514 HTTP42858 3142 aa8.37□□□□□ -1.07
ABCA4-202ENST00000460514 EVPLQ92817 2033 aa8.37□□□□□ -1.07
ABCA4-202ENST00000460514 UBE4BO95155 1302 aa8.36□□□□□ -1.07
ABCA4-202ENST00000460514 TRIP12Q14669 1992 aaPredicted RBP8.36□□□□□ -1.07
ABCA4-202ENST00000460514 SFI1A8K8P3 1242 aa8.36□□□□□ -1.07
ABCA4-202ENST00000460514 RSPH10B2B2RC85 870 aa8.36□□□□□ -1.07
ABCA4-202ENST00000460514 K7ENM7 598 aa8.36□□□□□ -1.07
ABCA4-202ENST00000460514 GCNT3O95395 438 aa8.36□□□□□ -1.07
ABCA4-202ENST00000460514 VTNP04004 478 aa8.36□□□□□ -1.07
ABCA4-202ENST00000460514 CLTBP09497 229 aa8.36□□□□□ -1.07
ABCA4-202ENST00000460514 RSPH10BP0C881 870 aa8.36□□□□□ -1.07
ABCA4-202ENST00000460514 SRGAP2CP0DJJ0 459 aa8.36□□□□□ -1.07
ABCA4-202ENST00000460514 GLRA2P23416 452 aa8.36□□□□□ -1.07
ABCA4-202ENST00000460514 THPOP40225 353 aa8.36□□□□□ -1.07
ABCA4-202ENST00000460514 NPTX2P47972 431 aa8.36□□□□□ -1.07
ABCA4-202ENST00000460514 GPC3P51654 580 aa8.36□□□□□ -1.07
ABCA4-202ENST00000460514 CRYBB1P53674 252 aaPredicted RBP8.36□□□□□ -1.07
ABCA4-202ENST00000460514 NLRP11P59045 1033 aaKnown RBP8.36□□□□□ -1.07
ABCA4-202ENST00000460514 RBL2Q08999 1139 aa8.36□□□□□ -1.07
ABCA4-202ENST00000460514 STRN3Q13033 797 aa8.36□□□□□ -1.07
ABCA4-202ENST00000460514 CAPSQ13938 189 aa8.36□□□□□ -1.07
ABCA4-202ENST00000460514 HIC1Q14526 733 aa8.36□□□□□ -1.07
ABCA4-202ENST00000460514 RUFY4Q6ZNE9 571 aa8.36□□□□□ -1.07
ABCA4-202ENST00000460514 RBM43Q6ZSC3 357 aaKnown RBP8.36□□□□□ -1.07
ABCA4-202ENST00000460514 SRGAP1Q7Z6B7 1085 aa8.36□□□□□ -1.07
ABCA4-202ENST00000460514 UBE2Q1Q7Z7E8 422 aa8.36□□□□□ -1.07
ABCA4-202ENST00000460514 SFR1Q86XK3 245 aa8.36□□□□□ -1.07
ABCA4-202ENST00000460514 DAW1Q8N136 415 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms