RNA–Protein interactions for RNA: ENST00000460112.3

SHROOM4-203, Transcript of shroom family member 4, humanhuman

TSL 5 BASIC

Gene SHROOM4, Length 8,919 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4-203ENST00000460112 NXF1Q9UBU9 619 aaKnown RBP9.44□□□□□ -0.9
SHROOM4-203ENST00000460112 CLCA2Q9UQC9 943 aa9.44□□□□□ -0.9
SHROOM4-203ENST00000460112 SMAPO00193 183 aa9.44□□□□□ -0.9
SHROOM4-203ENST00000460112 ILF2Q12905 390 aaKnown RBP9.44□□□□□ -0.9
SHROOM4-203ENST00000460112 TERF2Q15554 542 aa9.44□□□□□ -0.9
SHROOM4-203ENST00000460112 MIGA2Q7L4E1 593 aa9.44□□□□□ -0.9
SHROOM4-203ENST00000460112 HSPH1Q92598 858 aa9.44□□□□□ -0.9
SHROOM4-203ENST00000460112 ZFYVE19Q96K21 471 aa9.44□□□□□ -0.9
SHROOM4-203ENST00000460112 GTSE1Q9NYZ3 720 aa9.44□□□□□ -0.9
SHROOM4-203ENST00000460112 IL10P22301 178 aa9.44□□□□□ -0.9
SHROOM4-203ENST00000460112 MAP4P27816 1152 aaKnown RBP9.44□□□□□ -0.9
SHROOM4-203ENST00000460112 SFNP31947 248 aa9.44□□□□□ -0.9
SHROOM4-203ENST00000460112 INPP5AQ14642 412 aa9.44□□□□□ -0.9
SHROOM4-203ENST00000460112 CATSPER4Q7RTX7 472 aa9.44□□□□□ -0.9
SHROOM4-203ENST00000460112 MB21D1Q8N884 522 aa9.44□□□□□ -0.9
SHROOM4-203ENST00000460112 C2orf69Q8N8R5 385 aa9.44□□□□□ -0.9
SHROOM4-203ENST00000460112 ICA1LQ8NDH6 482 aa9.44□□□□□ -0.9
SHROOM4-203ENST00000460112 NHEJ1Q9H9Q4 299 aaPredicted RBP9.44□□□□□ -0.9
SHROOM4-203ENST00000460112 PSD3Q9NYI0 1048 aa9.44□□□□□ -0.9
SHROOM4-203ENST00000460112 SERPINB13Q9UIV8 391 aa9.44□□□□□ -0.9
SHROOM4-203ENST00000460112 MOSPD1Q9UJG1 213 aa9.44□□□□□ -0.9
SHROOM4-203ENST00000460112 DNAJC6O75061 913 aa9.43□□□□□ -0.9
SHROOM4-203ENST00000460112 CAPZA2P47755 286 aa9.43□□□□□ -0.9
SHROOM4-203ENST00000460112 ARL4DP49703 201 aa9.43□□□□□ -0.9
SHROOM4-203ENST00000460112 SFSWAPQ12872 951 aaKnown RBP9.43□□□□□ -0.9
SHROOM4-203ENST00000460112 NNTQ13423 1086 aa9.43□□□□□ -0.9
SHROOM4-203ENST00000460112 SNX17Q15036 470 aa9.43□□□□□ -0.9
SHROOM4-203ENST00000460112 DCUN1D1Q96GG9 259 aa9.43□□□□□ -0.9
SHROOM4-203ENST00000460112 BTBD6Q96KE9 485 aa9.43□□□□□ -0.9
SHROOM4-203ENST00000460112 EGFL8Q99944 293 aa9.43□□□□□ -0.9
SHROOM4-203ENST00000460112 OSBPL5Q9H0X9 879 aaPredicted RBP9.43□□□□□ -0.9
SHROOM4-203ENST00000460112 C4BPBP20851 252 aa9.43□□□□□ -0.9
SHROOM4-203ENST00000460112 FAM133AQ8N9E0 248 aa9.43□□□□□ -0.9
SHROOM4-203ENST00000460112 ASAP3Q8TDY4 903 aa9.43□□□□□ -0.9
SHROOM4-203ENST00000460112 TSPAN17Q96FV3 270 aa9.43□□□□□ -0.9
SHROOM4-203ENST00000460112 PHACTR3Q96KR7 559 aa9.43□□□□□ -0.9
SHROOM4-203ENST00000460112 GOLPH3LQ9H4A5 285 aa9.43□□□□□ -0.9
SHROOM4-203ENST00000460112 PLEKHA4Q9H4M7 779 aa9.43□□□□□ -0.9
SHROOM4-203ENST00000460112 ZFP69BQ9UJL9 534 aa9.43□□□□□ -0.9
SHROOM4-203ENST00000460112 BLOC1S6Q9UL45 172 aa9.43□□□□□ -0.9
SHROOM4-203ENST00000460112 GYG2O15488 501 aa9.43□□□□□ -0.9
SHROOM4-203ENST00000460112 PSMD3O43242 534 aa9.43□□□□□ -0.9
SHROOM4-203ENST00000460112 BLVRAP53004 296 aa9.43□□□□□ -0.9
SHROOM4-203ENST00000460112 CC2D1AQ6P1N0 951 aaPredicted RBP9.43□□□□□ -0.9
SHROOM4-203ENST00000460112 KIAA2013Q8IYS2 634 aa9.43□□□□□ -0.9
SHROOM4-203ENST00000460112 STAMQ92783 540 aa9.43□□□□□ -0.9
SHROOM4-203ENST00000460112 PTPRKQ15262 1439 aa9.43□□□□□ -0.9
SHROOM4-203ENST00000460112 K7ERI5 159 aa9.43□□□□□ -0.9
SHROOM4-203ENST00000460112 SYTL3Q4VX76 610 aa9.43□□□□□ -0.9
SHROOM4-203ENST00000460112 FAM133BQ5BKY9 247 aaKnown RBP9.43□□□□□ -0.9
SHROOM4-203ENST00000460112 CENPPQ6IPU0 288 aa9.43□□□□□ -0.9
SHROOM4-203ENST00000460112 TTC17Q96AE7 1141 aa9.43□□□□□ -0.9
SHROOM4-203ENST00000460112 RGL1Q9NZL6 768 aa9.43□□□□□ -0.9
SHROOM4-203ENST00000460112 CTIFO43310 598 aaKnown RBP9.43□□□□□ -0.9
SHROOM4-203ENST00000460112 MFSD14CQ5VZR4 134 aa9.43□□□□□ -0.9
SHROOM4-203ENST00000460112 ANO5Q75V66 913 aa9.43□□□□□ -0.9
SHROOM4-203ENST00000460112 KCNH4Q9UQ05 1017 aa9.43□□□□□ -0.9
SHROOM4-203ENST00000460112 DYTNA2CJ06 578 aa9.43□□□□□ -0.9
SHROOM4-203ENST00000460112 BBS9Q3SYG4 887 aa9.43□□□□□ -0.9
SHROOM4-203ENST00000460112 DDX42Q86XP3 938 aaKnown RBP eCLIP9.43□□□□□ -0.9
SHROOM4-203ENST00000460112 ZNF560Q96MR9 790 aa9.43□□□□□ -0.9
SHROOM4-203ENST00000460112 ALDH8A1Q9H2A2 487 aaPredicted RBP9.43□□□□□ -0.9
SHROOM4-203ENST00000460112 TBC1D22BQ9NU19 505 aa9.43□□□□□ -0.9
SHROOM4-203ENST00000460112 GINM1Q9NU53 330 aa9.43□□□□□ -0.9
SHROOM4-203ENST00000460112 PCDHA13Q9Y5I0 950 aa9.43□□□□□ -0.9
SHROOM4-203ENST00000460112 SPDYE5A6NIY4 337 aa9.43□□□□□ -0.9
SHROOM4-203ENST00000460112 DEAF1O75398 565 aaPredicted RBP9.43□□□□□ -0.9
SHROOM4-203ENST00000460112 CYBBP04839 570 aa9.43□□□□□ -0.9
SHROOM4-203ENST00000460112 GNL1P36915 607 aaPredicted RBP9.43□□□□□ -0.9
SHROOM4-203ENST00000460112 CARSP49589 748 aaKnown RBP9.43□□□□□ -0.9
SHROOM4-203ENST00000460112 MRPS25P82663 173 aaKnown RBP9.43□□□□□ -0.9
SHROOM4-203ENST00000460112 SPDYE7PQ495Y7 208 aa9.43□□□□□ -0.9
SHROOM4-203ENST00000460112 TJAP1Q5JTD0 557 aa9.43□□□□□ -0.9
SHROOM4-203ENST00000460112 KCTD16Q68DU8 428 aa9.43□□□□□ -0.9
SHROOM4-203ENST00000460112 KCNV1Q6PIU1 500 aa9.43□□□□□ -0.9
SHROOM4-203ENST00000460112 CHGBP05060 677 aa9.42□□□□□ -0.9
SHROOM4-203ENST00000460112 MMEP08473 750 aa9.42□□□□□ -0.9
SHROOM4-203ENST00000460112 NDUFA8P51970 172 aa9.42□□□□□ -0.9
SHROOM4-203ENST00000460112 SYDE1Q6ZW31 735 aaPredicted RBP9.42□□□□□ -0.9
SHROOM4-203ENST00000460112 ENOSF1Q7L5Y1 443 aa9.42□□□□□ -0.9
SHROOM4-203ENST00000460112 TMEM35BQ8NCS4 154 aa9.42□□□□□ -0.9
SHROOM4-203ENST00000460112 AFG1LQ8WV93 481 aa9.42□□□□□ -0.9
SHROOM4-203ENST00000460112 MAP4K1Q92918 833 aa9.42□□□□□ -0.9
SHROOM4-203ENST00000460112 FEM1BQ9UK73 627 aa9.42□□□□□ -0.9
SHROOM4-203ENST00000460112 PRG3Q9Y2Y8 225 aaPredicted RBP9.42□□□□□ -0.9
SHROOM4-203ENST00000460112 MAP3K13O43283 966 aa9.42□□□□□ -0.9
SHROOM4-203ENST00000460112 EPM2AIP1Q7L775 607 aaPredicted RBP9.42□□□□□ -0.9
SHROOM4-203ENST00000460112 OR6B3Q8NGW1 331 aa9.42□□□□□ -0.9
SHROOM4-203ENST00000460112 DTX3LQ8TDB6 740 aa9.42□□□□□ -0.9
SHROOM4-203ENST00000460112 S100A5P33763 92 aa9.42□□□□□ -0.9
SHROOM4-203ENST00000460112 TTLL4Q14679 1199 aa9.42□□□□□ -0.9
SHROOM4-203ENST00000460112 ZNF280CQ8ND82 737 aa9.42□□□□□ -0.9
SHROOM4-203ENST00000460112 SPATA16Q9BXB7 569 aa9.42□□□□□ -0.9
SHROOM4-203ENST00000460112 ZWILCHQ9H900 591 aa9.42□□□□□ -0.9
SHROOM4-203ENST00000460112 ZNF556Q9HAH1 456 aa9.42□□□□□ -0.9
SHROOM4-203ENST00000460112 SMARCAL1Q9NZC9 954 aa9.42□□□□□ -0.9
SHROOM4-203ENST00000460112 C16orf96A6NNT2 1141 aa9.42□□□□□ -0.9
SHROOM4-203ENST00000460112 TMED10P49755 219 aaKnown RBP9.42□□□□□ -0.9
SHROOM4-203ENST00000460112 GPC3P51654 580 aa9.42□□□□□ -0.9
SHROOM4-203ENST00000460112 HEATR6Q6AI08 1181 aaKnown RBP9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms