RNA–Protein interactions for RNA: ENST00000460064.1

CCDC50-203, Transcript of coiled-coil domain containing 50, humanhuman

TSL 2

Gene CCDC50, Length 420 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-203ENST00000460064 DDX3XO00571 662 aaKnown RBP eCLIP7.05□□□□□ -1.28
CCDC50-203ENST00000460064 COL6A1P12109 1028 aa7.05□□□□□ -1.28
CCDC50-203ENST00000460064 STAT5BP51692 787 aa7.05□□□□□ -1.28
CCDC50-203ENST00000460064 MAN2A1Q16706 1144 aa7.05□□□□□ -1.28
CCDC50-203ENST00000460064 ATAT1Q5SQI0 421 aa7.05□□□□□ -1.28
CCDC50-203ENST00000460064 CNKSR3Q6P9H4 555 aa7.05□□□□□ -1.28
CCDC50-203ENST00000460064 LILRA6Q6PI73 481 aa7.05□□□□□ -1.28
CCDC50-203ENST00000460064 FAM180AQ6UWF9 173 aa7.05□□□□□ -1.28
CCDC50-203ENST00000460064 B3GNT9Q6UX72 402 aa7.05□□□□□ -1.28
CCDC50-203ENST00000460064 SYDE1Q6ZW31 735 aaPredicted RBP7.05□□□□□ -1.28
CCDC50-203ENST00000460064 FAM129CQ86XR2 697 aa7.05□□□□□ -1.28
CCDC50-203ENST00000460064 GRAMD1CQ8IYS0 662 aa7.05□□□□□ -1.28
CCDC50-203ENST00000460064 DPF2Q92785 391 aa7.05□□□□□ -1.28
CCDC50-203ENST00000460064 WDR92Q96MX6 357 aa7.05□□□□□ -1.28
CCDC50-203ENST00000460064 PWWP2AQ96N64 755 aa7.05□□□□□ -1.28
CCDC50-203ENST00000460064 MAP3K14Q99558 947 aa7.05□□□□□ -1.28
CCDC50-203ENST00000460064 SLC12A5Q9H2X9 1139 aa7.05□□□□□ -1.28
CCDC50-203ENST00000460064 L2HGDHQ9H9P8 463 aa7.05□□□□□ -1.28
CCDC50-203ENST00000460064 DMRT3Q9NQL9 472 aa7.05□□□□□ -1.28
CCDC50-203ENST00000460064 CCDC154A6NI56 674 aa7.04□□□□□ -1.28
CCDC50-203ENST00000460064 DAPK3O43293 454 aa7.04□□□□□ -1.28
CCDC50-203ENST00000460064 HTRA2O43464 458 aaPredicted RBP7.04□□□□□ -1.28
CCDC50-203ENST00000460064 SEC24DO94855 1032 aaPredicted RBP7.04□□□□□ -1.28
CCDC50-203ENST00000460064 FSBPO95073 299 aa7.04□□□□□ -1.28
CCDC50-203ENST00000460064 MYL1P05976 194 aa7.04□□□□□ -1.28
CCDC50-203ENST00000460064 POLD1P28340 1107 aa7.04□□□□□ -1.28
CCDC50-203ENST00000460064 MCAMP43121 646 aa7.04□□□□□ -1.28
CCDC50-203ENST00000460064 EIF4HQ15056 248 aaKnown RBP7.04□□□□□ -1.28
CCDC50-203ENST00000460064 NOMO1Q15155 1222 aa7.04□□□□□ -1.28
CCDC50-203ENST00000460064 PRR31Q5SQ13 230 aa7.04□□□□□ -1.28
CCDC50-203ENST00000460064 PPP4R4Q6NUP7 873 aa7.04□□□□□ -1.28
CCDC50-203ENST00000460064 IFNL2Q8IZJ0 200 aa7.04□□□□□ -1.28
CCDC50-203ENST00000460064 PRR18Q8N4B5 295 aa7.04□□□□□ -1.28
CCDC50-203ENST00000460064 PPP1R14CQ8TAE6 165 aa7.04□□□□□ -1.28
CCDC50-203ENST00000460064 RIN2Q8WYP3 895 aaPredicted RBP7.04□□□□□ -1.28
CCDC50-203ENST00000460064 ZCCHC14Q8WYQ9 949 aaKnown RBP7.04□□□□□ -1.28
CCDC50-203ENST00000460064 TIFAQ96CG3 184 aa7.04□□□□□ -1.28
CCDC50-203ENST00000460064 PAWRQ96IZ0 340 aaKnown RBP7.04□□□□□ -1.28
CCDC50-203ENST00000460064 TAAR9Q96RI9 348 aa7.04□□□□□ -1.28
CCDC50-203ENST00000460064 OSBPL6Q9BZF3 934 aa7.04□□□□□ -1.28
CCDC50-203ENST00000460064 ARNT2Q9HBZ2 717 aa7.04□□□□□ -1.28
CCDC50-203ENST00000460064 SCOCQ9UIL1 159 aa7.04□□□□□ -1.28
CCDC50-203ENST00000460064 FRMPD2Q68DX3 1309 aaPredicted RBP7.03□□□□□ -1.28
CCDC50-203ENST00000460064 PLIN1O60240 522 aa7.03□□□□□ -1.28
CCDC50-203ENST00000460064 DTNBO60941 627 aa7.03□□□□□ -1.28
CCDC50-203ENST00000460064 LY86O95711 162 aa7.03□□□□□ -1.28
CCDC50-203ENST00000460064 HNRNPLP14866 589 aaKnown RBP eCLIP7.03□□□□□ -1.28
CCDC50-203ENST00000460064 EDNRBP24530 442 aa7.03□□□□□ -1.28
CCDC50-203ENST00000460064 RPL13P26373 211 aaKnown RBP7.03□□□□□ -1.28
CCDC50-203ENST00000460064 TOP3AQ13472 1001 aaPredicted RBP7.03□□□□□ -1.28
CCDC50-203ENST00000460064 GRM3Q14832 879 aa7.03□□□□□ -1.28
CCDC50-203ENST00000460064 KLHDC10Q6PID8 442 aa7.03□□□□□ -1.28
CCDC50-203ENST00000460064 CAMKK1Q8N5S9 505 aa7.03□□□□□ -1.28
CCDC50-203ENST00000460064 GPR156Q8NFN8 814 aa7.03□□□□□ -1.28
CCDC50-203ENST00000460064 NUDT10Q8NFP7 164 aa7.03□□□□□ -1.28
CCDC50-203ENST00000460064 RUNDC1Q96C34 613 aa7.03□□□□□ -1.28
CCDC50-203ENST00000460064 MVB12AQ96EY5 273 aa7.03□□□□□ -1.28
CCDC50-203ENST00000460064 NUDT11Q96G61 164 aa7.03□□□□□ -1.28
CCDC50-203ENST00000460064 ACO2Q99798 780 aaKnown RBP7.03□□□□□ -1.28
CCDC50-203ENST00000460064 C1orf112Q9NSG2 853 aa7.03□□□□□ -1.28
CCDC50-203ENST00000460064 RBM12Q9NTZ6 932 aaKnown RBP7.03□□□□□ -1.28
CCDC50-203ENST00000460064 DDX20Q9UHI6 824 aaKnown RBP7.03□□□□□ -1.28
CCDC50-203ENST00000460064 IPPQ9Y573 584 aa7.03□□□□□ -1.28
CCDC50-203ENST00000460064 AKR1B10O60218 316 aa7.02□□□□□ -1.29
CCDC50-203ENST00000460064 KLHL18O94889 574 aa7.02□□□□□ -1.29
CCDC50-203ENST00000460064 HMGCRP04035 888 aa7.02□□□□□ -1.29
CCDC50-203ENST00000460064 MYBP10242 640 aa7.02□□□□□ -1.29
CCDC50-203ENST00000460064 ZNF28P17035 718 aa7.02□□□□□ -1.29
CCDC50-203ENST00000460064 GLDCP23378 1020 aa7.02□□□□□ -1.29
CCDC50-203ENST00000460064 FXR1P51114 621 aaKnown RBP eCLIP7.02□□□□□ -1.29
CCDC50-203ENST00000460064 GBX1Q14549 363 aa7.02□□□□□ -1.29
CCDC50-203ENST00000460064 SSPNQ14714 243 aa7.02□□□□□ -1.29
CCDC50-203ENST00000460064 PGS1Q32NB8 556 aa7.02□□□□□ -1.29
CCDC50-203ENST00000460064 ATG14Q6ZNE5 492 aa7.02□□□□□ -1.29
CCDC50-203ENST00000460064 RTKN2Q8IZC4 609 aa7.02□□□□□ -1.29
CCDC50-203ENST00000460064 DIS3LQ8TF46 1054 aaKnown RBP7.02□□□□□ -1.29
CCDC50-203ENST00000460064 ZNF526Q8TF50 670 aaPredicted RBP7.02□□□□□ -1.29
CCDC50-203ENST00000460064 NKD2Q969F2 451 aaPredicted RBP7.02□□□□□ -1.29
CCDC50-203ENST00000460064 HDAC10Q969S8 669 aa7.02□□□□□ -1.29
CCDC50-203ENST00000460064 GFM2Q969S9 779 aaKnown RBP7.02□□□□□ -1.29
CCDC50-203ENST00000460064 C1GALT1C1Q96EU7 318 aa7.02□□□□□ -1.29
CCDC50-203ENST00000460064 UIMC1Q96RL1 719 aa7.02□□□□□ -1.29
CCDC50-203ENST00000460064 EPB41L4AQ9HCS5 686 aaPredicted RBP7.02□□□□□ -1.29
CCDC50-203ENST00000460064 CNOT6Q9ULM6 557 aaKnown RBP7.02□□□□□ -1.29
CCDC50-203ENST00000460064 RPTORQ8N122 1335 aa7.01□□□□□ -1.29
CCDC50-203ENST00000460064 LOC100996750A0A140TA64 210 aa7.01□□□□□ -1.29
CCDC50-203ENST00000460064 A0A1W2PR48 441 aa7.01□□□□□ -1.29
CCDC50-203ENST00000460064 CYP1A1P04798 512 aaPredicted RBP7.01□□□□□ -1.29
CCDC50-203ENST00000460064 PI3P19957 117 aa7.01□□□□□ -1.29
CCDC50-203ENST00000460064 CTSSP25774 331 aa7.01□□□□□ -1.29
CCDC50-203ENST00000460064 ADSLP30566 484 aaPredicted RBP7.01□□□□□ -1.29
CCDC50-203ENST00000460064 WASP42768 502 aa7.01□□□□□ -1.29
CCDC50-203ENST00000460064 MEOX1P50221 254 aa7.01□□□□□ -1.29
CCDC50-203ENST00000460064 PPP3CAQ08209 521 aa7.01□□□□□ -1.29
CCDC50-203ENST00000460064 C3orf36Q3SXR2 165 aa7.01□□□□□ -1.29
CCDC50-203ENST00000460064 TRIM68Q6AZZ1 485 aa7.01□□□□□ -1.29
CCDC50-203ENST00000460064 ABHD15Q6UXT9 468 aa7.01□□□□□ -1.29
CCDC50-203ENST00000460064 MIGA2Q7L4E1 593 aa7.01□□□□□ -1.29
CCDC50-203ENST00000460064 SAPCD2Q86UD0 394 aa7.01□□□□□ -1.29
CCDC50-203ENST00000460064 FAM84AQ96KN4 292 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms