RNA–Protein interactions for RNA: ENST00000459854.5

UFD1-205, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 1 (best)

Gene UFD1, Length 5,038 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-205ENST00000459854 SYMPKQ92797 1274 aaKnown RBP10.42□□□□□ -0.74
UFD1-205ENST00000459854 EDEM3Q9BZQ6 932 aa10.42□□□□□ -0.74
UFD1-205ENST00000459854 FAM129AQ9BZQ8 928 aa10.42□□□□□ -0.74
UFD1-205ENST00000459854 CLIC4Q9Y696 253 aa10.42□□□□□ -0.74
UFD1-205ENST00000459854 FLT1P17948 1338 aa10.42□□□□□ -0.74
UFD1-205ENST00000459854 H0Y626 953 aa10.42□□□□□ -0.74
UFD1-205ENST00000459854 TRIM16O95361 564 aa10.42□□□□□ -0.74
UFD1-205ENST00000459854 MOCS3O95396 460 aa10.42□□□□□ -0.74
UFD1-205ENST00000459854 RAP1GDS1P52306 607 aa10.42□□□□□ -0.74
UFD1-205ENST00000459854 PMS2P54278 862 aa10.42□□□□□ -0.74
UFD1-205ENST00000459854 MAGOHP61326 146 aaKnown RBP10.42□□□□□ -0.74
UFD1-205ENST00000459854 PTK2Q05397 1052 aa10.42□□□□□ -0.74
UFD1-205ENST00000459854 GPBP1Q86WP2 473 aa10.42□□□□□ -0.74
UFD1-205ENST00000459854 ZNF654Q8IZM8 581 aa10.42□□□□□ -0.74
UFD1-205ENST00000459854 MB21D1Q8N884 522 aa10.42□□□□□ -0.74
UFD1-205ENST00000459854 UHMK1Q8TAS1 419 aaKnown RBP10.42□□□□□ -0.74
UFD1-205ENST00000459854 HDAC11Q96DB2 347 aa10.42□□□□□ -0.74
UFD1-205ENST00000459854 WRNIP1Q96S55 665 aa10.42□□□□□ -0.74
UFD1-205ENST00000459854 ING2Q9H160 280 aa10.42□□□□□ -0.74
UFD1-205ENST00000459854 ANKFY1Q9P2R3 1169 aa10.42□□□□□ -0.74
UFD1-205ENST00000459854 PNMA2Q9UL42 364 aa10.42□□□□□ -0.74
UFD1-205ENST00000459854 SALL3Q9BXA9 1300 aa10.42□□□□□ -0.74
UFD1-205ENST00000459854 RESTQ13127 1097 aa10.42□□□□□ -0.74
UFD1-205ENST00000459854 DHX34Q14147 1143 aaKnown RBP10.42□□□□□ -0.74
UFD1-205ENST00000459854 HORMAD1Q86X24 394 aa10.42□□□□□ -0.74
UFD1-205ENST00000459854 TRIM50Q86XT4 487 aa10.42□□□□□ -0.74
UFD1-205ENST00000459854 CERS5Q8N5B7 392 aa10.42□□□□□ -0.74
UFD1-205ENST00000459854 ZNF579Q8NAF0 562 aaKnown RBP10.42□□□□□ -0.74
UFD1-205ENST00000459854 FAM212AQ96EL1 285 aa10.42□□□□□ -0.74
UFD1-205ENST00000459854 RNF26Q9BY78 433 aaPredicted RBP10.42□□□□□ -0.74
UFD1-205ENST00000459854 WARS2Q9UGM6 360 aaKnown RBP10.42□□□□□ -0.74
UFD1-205ENST00000459854 INTUQ9ULD6 942 aa10.42□□□□□ -0.74
UFD1-205ENST00000459854 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.42□□□□□ -0.74
UFD1-205ENST00000459854 SYCE1LA8MT33 242 aa10.41□□□□□ -0.74
UFD1-205ENST00000459854 KPNA7A9QM74 516 aa10.41□□□□□ -0.74
UFD1-205ENST00000459854 ANXA13P27216 316 aa10.41□□□□□ -0.74
UFD1-205ENST00000459854 EIF4A3P38919 411 aaKnown RBP10.41□□□□□ -0.74
UFD1-205ENST00000459854 ARFIP2P53365 341 aa10.41□□□□□ -0.74
UFD1-205ENST00000459854 TMEM154Q6P9G4 183 aa10.41□□□□□ -0.74
UFD1-205ENST00000459854 ACAD11Q709F0 780 aa10.41□□□□□ -0.74
UFD1-205ENST00000459854 SPATA21Q7Z572 469 aa10.41□□□□□ -0.74
UFD1-205ENST00000459854 PDIK1LQ8N165 341 aa10.41□□□□□ -0.74
UFD1-205ENST00000459854 CCT8L2Q96SF2 557 aa10.41□□□□□ -0.74
UFD1-205ENST00000459854 CCDC134Q9H6E4 229 aa10.41□□□□□ -0.74
UFD1-205ENST00000459854 KRT82Q9NSB4 513 aa10.41□□□□□ -0.74
UFD1-205ENST00000459854 KCNJ14Q9UNX9 436 aa10.41□□□□□ -0.74
UFD1-205ENST00000459854 GAKO14976 1311 aa10.41□□□□□ -0.74
UFD1-205ENST00000459854 KRT38O76015 456 aa10.41□□□□□ -0.74
UFD1-205ENST00000459854 CHRNA3P32297 505 aa10.41□□□□□ -0.74
UFD1-205ENST00000459854 RCSD1Q6JBY9 416 aa10.41□□□□□ -0.74
UFD1-205ENST00000459854 TMEM179Q6ZVK1 233 aa10.41□□□□□ -0.74
UFD1-205ENST00000459854 CMTM5Q96DZ9 223 aa10.41□□□□□ -0.74
UFD1-205ENST00000459854 TLK1Q9UKI8 766 aa10.41□□□□□ -0.74
UFD1-205ENST00000459854 SMG5Q9UPR3 1016 aaKnown RBP10.41□□□□□ -0.74
UFD1-205ENST00000459854 STRNO43815 780 aa10.41□□□□□ -0.74
UFD1-205ENST00000459854 DIAPH2O60879 1101 aa10.41□□□□□ -0.74
UFD1-205ENST00000459854 S100BP04271 92 aaPredicted RBP10.41□□□□□ -0.74
UFD1-205ENST00000459854 ATF7P17544 494 aaPredicted RBP10.41□□□□□ -0.74
UFD1-205ENST00000459854 CDK8P49336 464 aa10.41□□□□□ -0.74
UFD1-205ENST00000459854 GYS2P54840 703 aa10.41□□□□□ -0.74
UFD1-205ENST00000459854 PTH1RQ03431 593 aa10.41□□□□□ -0.74
UFD1-205ENST00000459854 PLS1Q14651 629 aa10.41□□□□□ -0.74
UFD1-205ENST00000459854 SBK1Q52WX2 424 aa10.41□□□□□ -0.74
UFD1-205ENST00000459854 DPH6Q7L8W6 267 aa10.41□□□□□ -0.74
UFD1-205ENST00000459854 ATP6V0A4Q9HBG4 840 aa10.41□□□□□ -0.74
UFD1-205ENST00000459854 GINM1Q9NU53 330 aa10.41□□□□□ -0.74
UFD1-205ENST00000459854 PPARGC1AQ9UBK2 798 aaKnown RBP10.41□□□□□ -0.74
UFD1-205ENST00000459854 SRPRBQ9Y5M8 271 aaKnown RBP10.41□□□□□ -0.74
UFD1-205ENST00000459854 GSG1L2A8MUP6 293 aa10.41□□□□□ -0.74
UFD1-205ENST00000459854 HNRNPRO43390 633 aaKnown RBP10.41□□□□□ -0.74
UFD1-205ENST00000459854 FAM107AO95990 144 aa10.41□□□□□ -0.74
UFD1-205ENST00000459854 ECE1P42892 770 aa10.41□□□□□ -0.74
UFD1-205ENST00000459854 CHADLQ6NUI6 762 aa10.41□□□□□ -0.74
UFD1-205ENST00000459854 FANCBQ8NB91 859 aa10.41□□□□□ -0.74
UFD1-205ENST00000459854 GDAP1Q8TB36 358 aa10.41□□□□□ -0.74
UFD1-205ENST00000459854 RNF34Q969K3 372 aa10.41□□□□□ -0.74
UFD1-205ENST00000459854 WWP1Q9H0M0 922 aa10.41□□□□□ -0.74
UFD1-205ENST00000459854 BLOC1S6Q9UL45 172 aa10.41□□□□□ -0.74
UFD1-205ENST00000459854 ENO4A6NNW6 628 aa10.4□□□□□ -0.74
UFD1-205ENST00000459854 H0Y3Z8 333 aa10.4□□□□□ -0.74
UFD1-205ENST00000459854 PLS3P13797 630 aa10.4□□□□□ -0.74
UFD1-205ENST00000459854 PSMC1P62191 440 aaKnown RBP10.4□□□□□ -0.74
UFD1-205ENST00000459854 LAMB3Q13751 1172 aa10.4□□□□□ -0.74
UFD1-205ENST00000459854 SYDE1Q6ZW31 735 aaPredicted RBP10.4□□□□□ -0.74
UFD1-205ENST00000459854 RASSF3Q86WH2 238 aa10.4□□□□□ -0.74
UFD1-205ENST00000459854 NSUN7Q8NE18 718 aaKnown RBP10.4□□□□□ -0.74
UFD1-205ENST00000459854 FBXL13Q8NEE6 735 aa10.4□□□□□ -0.74
UFD1-205ENST00000459854 MTBPQ96DY7 904 aa10.4□□□□□ -0.74
UFD1-205ENST00000459854 TGS1Q96RS0 853 aaKnown RBP10.4□□□□□ -0.74
UFD1-205ENST00000459854 CYTH2Q99418 400 aa10.4□□□□□ -0.74
UFD1-205ENST00000459854 ABHD10Q9NUJ1 306 aa10.4□□□□□ -0.74
UFD1-205ENST00000459854 DDX28Q9NUL7 540 aaKnown RBP10.4□□□□□ -0.74
UFD1-205ENST00000459854 UBE4BO95155 1302 aa10.4□□□□□ -0.74
UFD1-205ENST00000459854 SGK1O00141 431 aa10.4□□□□□ -0.74
UFD1-205ENST00000459854 FMNL1O95466 1100 aaPredicted RBP10.4□□□□□ -0.74
UFD1-205ENST00000459854 MAPK4P31152 587 aa10.4□□□□□ -0.74
UFD1-205ENST00000459854 PSMC2P35998 433 aaKnown RBP10.4□□□□□ -0.74
UFD1-205ENST00000459854 VHLP40337 213 aa10.4□□□□□ -0.74
UFD1-205ENST00000459854 ZNF280AP59817 542 aaPredicted RBP10.4□□□□□ -0.74
UFD1-205ENST00000459854 OTUD6AQ7L8S5 288 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms