RNA–Protein interactions for RNA: ENST00000459788.1

HDLBP-228, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-228ENST00000459788 TMEM150BA6NC51 233 aa11.15□□□□□ -0.62
HDLBP-228ENST00000459788 FAM205CA6NFA0 338 aa11.15□□□□□ -0.62
HDLBP-228ENST00000459788 LAD1O00515 517 aa11.15□□□□□ -0.62
HDLBP-228ENST00000459788 ST18O60284 1047 aa11.15□□□□□ -0.62
HDLBP-228ENST00000459788 FGFR1P11362 822 aa11.15□□□□□ -0.62
HDLBP-228ENST00000459788 ATF7P17544 494 aaPredicted RBP11.15□□□□□ -0.62
HDLBP-228ENST00000459788 DNAJB1P25685 340 aa11.15□□□□□ -0.62
HDLBP-228ENST00000459788 U2AF2P26368 475 aaKnown RBP eCLIP11.15□□□□□ -0.62
HDLBP-228ENST00000459788 TXKP42681 527 aa11.15□□□□□ -0.62
HDLBP-228ENST00000459788 MCM2P49736 904 aa11.15□□□□□ -0.62
HDLBP-228ENST00000459788 GATMP50440 423 aa11.15□□□□□ -0.62
HDLBP-228ENST00000459788 PTENP60484 403 aa11.15□□□□□ -0.62
HDLBP-228ENST00000459788 GIT2Q14161 759 aa11.15□□□□□ -0.62
HDLBP-228ENST00000459788 CLLU1OSQ5K130 101 aa11.15□□□□□ -0.62
HDLBP-228ENST00000459788 PLA2G4FQ68DD2 849 aa11.15□□□□□ -0.62
HDLBP-228ENST00000459788 GLB1LQ6UWU2 654 aa11.15□□□□□ -0.62
HDLBP-228ENST00000459788 NOSTRINQ8IVI9 506 aa11.15□□□□□ -0.62
HDLBP-228ENST00000459788 CCDC83Q8IWF9 413 aa11.15□□□□□ -0.62
HDLBP-228ENST00000459788 KCTD17Q8N5Z5 321 aa11.15□□□□□ -0.62
HDLBP-228ENST00000459788 FAM184AQ8NB25 1140 aa11.15□□□□□ -0.62
HDLBP-228ENST00000459788 MCPH1Q8NEM0 835 aa11.15□□□□□ -0.62
HDLBP-228ENST00000459788 NLRP4Q96MN2 994 aa11.15□□□□□ -0.62
HDLBP-228ENST00000459788 CCDC43Q96MW1 224 aaKnown RBP11.15□□□□□ -0.62
HDLBP-228ENST00000459788 NACC1Q96RE7 527 aa11.15□□□□□ -0.62
HDLBP-228ENST00000459788 UPF2Q9HAU5 1272 aaKnown RBP11.15□□□□□ -0.62
HDLBP-228ENST00000459788 FAM105AQ9NUU6 356 aa11.15□□□□□ -0.62
HDLBP-228ENST00000459788 CD207Q9UJ71 328 aa11.15□□□□□ -0.62
HDLBP-228ENST00000459788 NOL7Q9UMY1 257 aaKnown RBP11.15□□□□□ -0.62
HDLBP-228ENST00000459788 PIN4Q9Y237 131 aaKnown RBP11.15□□□□□ -0.62
HDLBP-228ENST00000459788 MTCL1Q9Y4B5 1905 aaKnown RBP11.14□□□□□ -0.63
HDLBP-228ENST00000459788 C19orf67A6NJJ6 358 aa11.14□□□□□ -0.63
HDLBP-228ENST00000459788 PI4K2BG5E9Z4 385 aa11.14□□□□□ -0.63
HDLBP-228ENST00000459788 INPPL1O15357 1258 aa11.14□□□□□ -0.63
HDLBP-228ENST00000459788 OR52Z1P0C646 297 aa11.14□□□□□ -0.63
HDLBP-228ENST00000459788 RPA1P27694 616 aa11.14□□□□□ -0.63
HDLBP-228ENST00000459788 ARL2P36404 184 aa11.14□□□□□ -0.63
HDLBP-228ENST00000459788 ALDH7A1P49419 539 aaKnown RBP11.14□□□□□ -0.63
HDLBP-228ENST00000459788 RARRES1P49788 294 aa11.14□□□□□ -0.63
HDLBP-228ENST00000459788 FXR2P51116 673 aaKnown RBP eCLIP11.14□□□□□ -0.632e-14■■■□□ 15
HDLBP-228ENST00000459788 CYP4A11Q02928 519 aa11.14□□□□□ -0.63
HDLBP-228ENST00000459788 CTTNQ14247 550 aaKnown RBP11.14□□□□□ -0.63
HDLBP-228ENST00000459788 PDIA5Q14554 519 aa11.14□□□□□ -0.63
HDLBP-228ENST00000459788 DUSP6Q16828 381 aa11.14□□□□□ -0.63
HDLBP-228ENST00000459788 HAUS3Q68CZ6 603 aa11.14□□□□□ -0.63
HDLBP-228ENST00000459788 LRRC55Q6ZSA7 311 aa11.14□□□□□ -0.63
HDLBP-228ENST00000459788 ADHFE1Q8IWW8 467 aa11.14□□□□□ -0.63
HDLBP-228ENST00000459788 GJD3Q8N144 294 aa11.14□□□□□ -0.63
HDLBP-228ENST00000459788 SLC39A11Q8N1S5 342 aa11.14□□□□□ -0.63
HDLBP-228ENST00000459788 MSLNLQ96KJ4 702 aa11.14□□□□□ -0.63
HDLBP-228ENST00000459788 PRIMPOLQ96LW4 560 aa11.14□□□□□ -0.63
HDLBP-228ENST00000459788 RAB34Q9BZG1 259 aa11.14□□□□□ -0.63
HDLBP-228ENST00000459788 TLE6Q9H808 572 aa11.14□□□□□ -0.63
HDLBP-228ENST00000459788 ARIH1Q9Y4X5 557 aaPredicted RBP11.14□□□□□ -0.63
HDLBP-228ENST00000459788 IRAK3Q9Y616 596 aa11.14□□□□□ -0.63
HDLBP-228ENST00000459788 H3BQ06 376 aaPredicted RBP11.13□□□□□ -0.63
HDLBP-228ENST00000459788 MBTPS2O43462 519 aa11.13□□□□□ -0.63
HDLBP-228ENST00000459788 ERLIN2O94905 339 aa11.13□□□□□ -0.63
HDLBP-228ENST00000459788 SRGAP2CP0DJJ0 459 aa11.13□□□□□ -0.63
HDLBP-228ENST00000459788 SPATA31C1P0DKV0 1188 aa11.13□□□□□ -0.63
HDLBP-228ENST00000459788 ALADP13716 330 aa11.13□□□□□ -0.63
HDLBP-228ENST00000459788 HOXB8P17481 243 aaPredicted RBP11.13□□□□□ -0.63
HDLBP-228ENST00000459788 NCLP19338 710 aaKnown RBP11.13□□□□□ -0.63
HDLBP-228ENST00000459788 HOXA11P31270 313 aaPredicted RBP11.13□□□□□ -0.63
HDLBP-228ENST00000459788 GNL2Q13823 731 aaKnown RBP11.13□□□□□ -0.63
HDLBP-228ENST00000459788 KCNC3Q14003 757 aa11.13□□□□□ -0.63
HDLBP-228ENST00000459788 NOMO2Q5JPE7 1267 aa11.13□□□□□ -0.63
HDLBP-228ENST00000459788 TTC38Q5R3I4 469 aa11.13□□□□□ -0.63
HDLBP-228ENST00000459788 NOTUMQ6P988 496 aa11.13□□□□□ -0.63
HDLBP-228ENST00000459788 KSR1Q8IVT5 923 aa11.13□□□□□ -0.63
HDLBP-228ENST00000459788 HACE1Q8IYU2 909 aa11.13□□□□□ -0.63
HDLBP-228ENST00000459788 ZNF579Q8NAF0 562 aaKnown RBP11.13□□□□□ -0.63
HDLBP-228ENST00000459788 RNF149Q8NC42 400 aa11.13□□□□□ -0.63
HDLBP-228ENST00000459788 SMRP1Q8NCR6 262 aa11.13□□□□□ -0.63
HDLBP-228ENST00000459788 URGCPQ8TCY9 931 aa11.13□□□□□ -0.63
HDLBP-228ENST00000459788 HELQQ8TDG4 1101 aa11.13□□□□□ -0.63
HDLBP-228ENST00000459788 TMEM143Q96AN5 459 aa11.13□□□□□ -0.63
HDLBP-228ENST00000459788 NECAB3Q96P71 396 aaPredicted RBP11.13□□□□□ -0.63
HDLBP-228ENST00000459788 SH2D3AQ9BRG2 576 aa11.13□□□□□ -0.63
HDLBP-228ENST00000459788 TMEM175Q9BSA9 504 aa11.13□□□□□ -0.63
HDLBP-228ENST00000459788 XPNPEP1Q9NQW7 623 aa11.13□□□□□ -0.63
HDLBP-228ENST00000459788 PCDHB2Q9Y5E7 798 aa11.13□□□□□ -0.63
HDLBP-228ENST00000459788 C5orf42Q9H799 3197 aa11.13□□□□□ -0.63
HDLBP-228ENST00000459788 GPR37L1O60883 481 aa11.12□□□□□ -0.63
HDLBP-228ENST00000459788 TBX10O75333 385 aa11.12□□□□□ -0.63
HDLBP-228ENST00000459788 OFD1O75665 1012 aa11.12□□□□□ -0.63
HDLBP-228ENST00000459788 IL9P15248 144 aa11.12□□□□□ -0.63
HDLBP-228ENST00000459788 FGFR4P22455 802 aa11.12□□□□□ -0.63
HDLBP-228ENST00000459788 MCM7P33993 719 aa11.12□□□□□ -0.63
HDLBP-228ENST00000459788 IRS1P35568 1242 aa11.12□□□□□ -0.63
HDLBP-228ENST00000459788 PRPHP41219 470 aa11.12□□□□□ -0.63
HDLBP-228ENST00000459788 NRIP1P48552 1158 aa11.12□□□□□ -0.63
HDLBP-228ENST00000459788 NDUFV1P49821 464 aa11.12□□□□□ -0.63
HDLBP-228ENST00000459788 ZP2Q05996 745 aa11.12□□□□□ -0.63
HDLBP-228ENST00000459788 SMC1AQ14683 1233 aaKnown RBP11.12□□□□□ -0.63
HDLBP-228ENST00000459788 FAM187BQ17R55 369 aa11.12□□□□□ -0.63
HDLBP-228ENST00000459788 PPP4R3CPQ6ZMV5 832 aa11.12□□□□□ -0.63
HDLBP-228ENST00000459788 DDX53Q86TM3 631 aaKnown RBP11.12□□□□□ -0.63
HDLBP-228ENST00000459788 CATSPER3Q86XQ3 398 aa11.12□□□□□ -0.63
HDLBP-228ENST00000459788 RNF169Q8NCN4 708 aa11.12□□□□□ -0.63
HDLBP-228ENST00000459788 MICAL1Q8TDZ2 1067 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms