RNA–Protein interactions for RNA: ENST00000459727.5

HDAC3-202, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 524 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-202ENST00000459727 CAP2P40123 477 aa9.57□□□□□ -0.88
HDAC3-202ENST00000459727 QARSP47897 775 aaKnown RBP9.57□□□□□ -0.88
HDAC3-202ENST00000459727 CYP2J2P51589 502 aa9.57□□□□□ -0.88
HDAC3-202ENST00000459727 SMTNP53814 917 aa9.57□□□□□ -0.88
HDAC3-202ENST00000459727 MFAP3P55082 362 aa9.57□□□□□ -0.88
HDAC3-202ENST00000459727 IRX5P78411 483 aaPredicted RBP9.57□□□□□ -0.88
HDAC3-202ENST00000459727 KRT76Q01546 638 aa9.57□□□□□ -0.88
HDAC3-202ENST00000459727 MAP3K10Q02779 954 aa9.57□□□□□ -0.88
HDAC3-202ENST00000459727 PPATQ06203 517 aa9.57□□□□□ -0.88
HDAC3-202ENST00000459727 DRP2Q13474 957 aa9.57□□□□□ -0.88
HDAC3-202ENST00000459727 SEL1L2Q5TEA6 688 aa9.57□□□□□ -0.88
HDAC3-202ENST00000459727 YTHDF3Q7Z739 585 aaKnown RBP9.57□□□□□ -0.88
HDAC3-202ENST00000459727 C4orf19Q8IY42 314 aa9.57□□□□□ -0.88
HDAC3-202ENST00000459727 PRPF38AQ8NAV1 312 aaKnown RBP9.57□□□□□ -0.88
HDAC3-202ENST00000459727 C7orf43Q8WVR3 580 aa9.57□□□□□ -0.88
HDAC3-202ENST00000459727 DHX38Q92620 1227 aaKnown RBP9.57□□□□□ -0.88
HDAC3-202ENST00000459727 P3H4Q92791 437 aa9.57□□□□□ -0.88
HDAC3-202ENST00000459727 KIFAP3Q92845 792 aa9.57□□□□□ -0.88
HDAC3-202ENST00000459727 TRIM11Q96F44 468 aa9.57□□□□□ -0.88
HDAC3-202ENST00000459727 PRMT6Q96LA8 375 aaPredicted RBP9.57□□□□□ -0.88
HDAC3-202ENST00000459727 GDAP1L1Q96MZ0 367 aa9.57□□□□□ -0.88
HDAC3-202ENST00000459727 FIZ1Q96SL8 496 aa9.57□□□□□ -0.88
HDAC3-202ENST00000459727 AGPAT1Q99943 283 aa9.57□□□□□ -0.88
HDAC3-202ENST00000459727 WNT8AQ9H1J5 351 aa9.57□□□□□ -0.88
HDAC3-202ENST00000459727 TMBIM4Q9HC24 238 aa9.57□□□□□ -0.88
HDAC3-202ENST00000459727 UVRAGQ9P2Y5 699 aa9.57□□□□□ -0.88
HDAC3-202ENST00000459727 MTRF1LQ9UGC7 380 aaKnown RBP9.57□□□□□ -0.88
HDAC3-202ENST00000459727 FEZ2Q9UHY8 353 aaPredicted RBP9.57□□□□□ -0.88
HDAC3-202ENST00000459727 CCPG1Q9ULG6 757 aa9.57□□□□□ -0.88
HDAC3-202ENST00000459727 PLAAQ9Y263 795 aa9.57□□□□□ -0.88
HDAC3-202ENST00000459727 CTDP1Q9Y5B0 961 aaPredicted RBP9.57□□□□□ -0.88
HDAC3-202ENST00000459727 WDR64B1ANS9 1081 aa9.56□□□□□ -0.88
HDAC3-202ENST00000459727 RTN2O75298 545 aa9.56□□□□□ -0.88
HDAC3-202ENST00000459727 PTGER2P43116 358 aa9.56□□□□□ -0.88
HDAC3-202ENST00000459727 MXI1P50539 228 aa9.56□□□□□ -0.88
HDAC3-202ENST00000459727 DNA2P51530 1060 aa9.56□□□□□ -0.88
HDAC3-202ENST00000459727 PSMC5P62195 406 aa9.56□□□□□ -0.88
HDAC3-202ENST00000459727 ERVK-9P63128 1117 aa9.56□□□□□ -0.88
HDAC3-202ENST00000459727 GPC5P78333 572 aa9.56□□□□□ -0.88
HDAC3-202ENST00000459727 GTF2BQ00403 316 aa9.56□□□□□ -0.88
HDAC3-202ENST00000459727 MAPK7Q13164 816 aa9.56□□□□□ -0.88
HDAC3-202ENST00000459727 PLS1Q14651 629 aa9.56□□□□□ -0.88
HDAC3-202ENST00000459727 TTMPQ5BVD1 217 aa9.56□□□□□ -0.88
HDAC3-202ENST00000459727 CCDC174Q6PII3 467 aa9.56□□□□□ -0.88
HDAC3-202ENST00000459727 CEP128Q6ZU80 1094 aa9.56□□□□□ -0.88
HDAC3-202ENST00000459727 SYDE1Q6ZW31 735 aaPredicted RBP9.56□□□□□ -0.88
HDAC3-202ENST00000459727 OTUD6AQ7L8S5 288 aa9.56□□□□□ -0.88
HDAC3-202ENST00000459727 TAX1BP1Q86VP1 789 aa9.56□□□□□ -0.88
HDAC3-202ENST00000459727 GLYCTKQ8IVS8 523 aa9.56□□□□□ -0.88
HDAC3-202ENST00000459727 SPICE1Q8N0Z3 855 aa9.56□□□□□ -0.88
HDAC3-202ENST00000459727 LNX1Q8TBB1 728 aaPredicted RBP9.56□□□□□ -0.88
HDAC3-202ENST00000459727 SLC35G2Q8TBE7 412 aa9.56□□□□□ -0.88
HDAC3-202ENST00000459727 TMC2Q8TDI7 906 aa9.56□□□□□ -0.88
HDAC3-202ENST00000459727 RIN2Q8WYP3 895 aaPredicted RBP9.56□□□□□ -0.88
HDAC3-202ENST00000459727 HOOK2Q96ED9 719 aa9.56□□□□□ -0.88
HDAC3-202ENST00000459727 RNPC3Q96LT9 517 aaKnown RBP9.56□□□□□ -0.88
HDAC3-202ENST00000459727 FMO2Q99518 471 aa9.56□□□□□ -0.88
HDAC3-202ENST00000459727 KIAA1683Q9H0B3 1180 aa9.56□□□□□ -0.88
HDAC3-202ENST00000459727 EPN3Q9H201 632 aa9.56□□□□□ -0.88
HDAC3-202ENST00000459727 EFCC1Q9HA90 598 aa9.56□□□□□ -0.88
HDAC3-202ENST00000459727 KIAA1586Q9HCI6 787 aa9.56□□□□□ -0.88
HDAC3-202ENST00000459727 SMARCAL1Q9NZC9 954 aa9.56□□□□□ -0.88
HDAC3-202ENST00000459727 LCMT1Q9UIC8 334 aa9.56□□□□□ -0.88
HDAC3-202ENST00000459727 UBIAD1Q9Y5Z9 338 aa9.56□□□□□ -0.88
HDAC3-202ENST00000459727 GRIN2DO15399 1336 aa9.56□□□□□ -0.88
HDAC3-202ENST00000459727 ZNF233A6NK53 670 aa9.55□□□□□ -0.88
HDAC3-202ENST00000459727 CCDC169A6NNP5 214 aa9.55□□□□□ -0.88
HDAC3-202ENST00000459727 TCP10L2B9ZVM9 353 aa9.55□□□□□ -0.88
HDAC3-202ENST00000459727 BUB1BO60566 1050 aaPredicted RBP9.55□□□□□ -0.88
HDAC3-202ENST00000459727 PHF2O75151 1096 aa9.55□□□□□ -0.88
HDAC3-202ENST00000459727 PPFIA2O75334 1257 aa9.55□□□□□ -0.88
HDAC3-202ENST00000459727 STAM2O75886 525 aa9.55□□□□□ -0.88
HDAC3-202ENST00000459727 FGGP02679 453 aa9.55□□□□□ -0.88
HDAC3-202ENST00000459727 ZBTB48P10074 688 aaPredicted RBP9.55□□□□□ -0.88
HDAC3-202ENST00000459727 MYBL1P10243 752 aa9.55□□□□□ -0.88
HDAC3-202ENST00000459727 HSD17B3P37058 310 aa9.55□□□□□ -0.88
HDAC3-202ENST00000459727 MDH1P40925 334 aaKnown RBP9.55□□□□□ -0.88
HDAC3-202ENST00000459727 RARRES1P49788 294 aa9.55□□□□□ -0.88
HDAC3-202ENST00000459727 GUCY2FP51841 1108 aa9.55□□□□□ -0.88
HDAC3-202ENST00000459727 NCKAP1LP55160 1127 aa9.55□□□□□ -0.88
HDAC3-202ENST00000459727 RTP1P59025 263 aa9.55□□□□□ -0.88
HDAC3-202ENST00000459727 SNAP25P60880 206 aa9.55□□□□□ -0.88
HDAC3-202ENST00000459727 DR1Q01658 176 aa9.55□□□□□ -0.88
HDAC3-202ENST00000459727 DMP1Q13316 513 aaPredicted RBP9.55□□□□□ -0.88
HDAC3-202ENST00000459727 MTMR1Q13613 665 aa9.55□□□□□ -0.88
HDAC3-202ENST00000459727 SLMAPQ14BN4 828 aa9.55□□□□□ -0.88
HDAC3-202ENST00000459727 TTC31Q49AM3 519 aaPredicted RBP9.55□□□□□ -0.88
HDAC3-202ENST00000459727 CBWD6Q4V339 395 aa9.55□□□□□ -0.88
HDAC3-202ENST00000459727 EPC2Q52LR7 807 aa9.55□□□□□ -0.88
HDAC3-202ENST00000459727 ZC2HC1CQ53FD0 456 aaPredicted RBP9.55□□□□□ -0.88
HDAC3-202ENST00000459727 CBWD3Q5JTY5 395 aa9.55□□□□□ -0.88
HDAC3-202ENST00000459727 CBWD5Q5RIA9 395 aa9.55□□□□□ -0.88
HDAC3-202ENST00000459727 CEP85LQ5SZL2 805 aa9.55□□□□□ -0.88
HDAC3-202ENST00000459727 TMC3Q7Z5M5 1100 aa9.55□□□□□ -0.88
HDAC3-202ENST00000459727 CYP2W1Q8TAV3 490 aa9.55□□□□□ -0.88
HDAC3-202ENST00000459727 SPIRE2Q8WWL2 714 aa9.55□□□□□ -0.88
HDAC3-202ENST00000459727 ATP6V0A1Q93050 837 aa9.55□□□□□ -0.88
HDAC3-202ENST00000459727 CDHR1Q96JP9 859 aa9.55□□□□□ -0.88
HDAC3-202ENST00000459727 GMLQ99445 158 aa9.55□□□□□ -0.88
HDAC3-202ENST00000459727 SENP7Q9BQF6 1050 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms