RNA–Protein interactions for RNA: ENST00000459639.5

U2AF1-204, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best) BASIC

Gene U2AF1, Length 1,675 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-204ENST00000459639 RETREG2Q8NC44 543 aa26.73■■□□□ 1.87
U2AF1-204ENST00000459639 PRPF31Q8WWY3 499 aaKnown RBP26.73■■□□□ 1.87
U2AF1-204ENST00000459639 IQCDQ96DY2 449 aa26.73■■□□□ 1.87
U2AF1-204ENST00000459639 NUP58Q9BVL2 599 aa26.73■■□□□ 1.87
U2AF1-204ENST00000459639 TMEM134Q9H6X4 195 aa26.73■■□□□ 1.87
U2AF1-204ENST00000459639 SUGCTQ9HAC7 445 aa26.73■■□□□ 1.87
U2AF1-204ENST00000459639 RNF186Q9NXI6 227 aa26.73■■□□□ 1.87
U2AF1-204ENST00000459639 PHLPP2Q6ZVD8 1323 aa26.73■■□□□ 1.87
U2AF1-204ENST00000459639 MAGEB2O15479 319 aa26.73■■□□□ 1.87
U2AF1-204ENST00000459639 EXOC3O60645 756 aa26.73■■□□□ 1.87
U2AF1-204ENST00000459639 CYBAP13498 195 aa26.73■■□□□ 1.87
U2AF1-204ENST00000459639 VEGFBP49765 207 aa26.73■■□□□ 1.87
U2AF1-204ENST00000459639 CPT1AP50416 773 aa26.73■■□□□ 1.87
U2AF1-204ENST00000459639 AP5M1Q9H0R1 490 aa26.73■■□□□ 1.87
U2AF1-204ENST00000459639 PYCARDQ9ULZ3 195 aa26.73■■□□□ 1.87
U2AF1-204ENST00000459639 TISP43B9A030 160 aa26.72■■□□□ 1.87
U2AF1-204ENST00000459639 ADCY3O60266 1144 aa26.72■■□□□ 1.87
U2AF1-204ENST00000459639 MFAP3LO75121 409 aa26.72■■□□□ 1.87
U2AF1-204ENST00000459639 SKILP12757 684 aa26.72■■□□□ 1.87
U2AF1-204ENST00000459639 CNGA1P29973 690 aa26.72■■□□□ 1.87
U2AF1-204ENST00000459639 CASP14P31944 242 aa26.72■■□□□ 1.87
U2AF1-204ENST00000459639 STRN3Q13033 797 aa26.72■■□□□ 1.87
U2AF1-204ENST00000459639 FIGNQ5HY92 759 aa26.72■■□□□ 1.87
U2AF1-204ENST00000459639 LRRC71Q8N4P6 559 aa26.72■■□□□ 1.87
U2AF1-204ENST00000459639 XXYLT1Q8NBI6 393 aa26.72■■□□□ 1.87
U2AF1-204ENST00000459639 LENG1Q96BZ8 264 aaPredicted RBP26.72■■□□□ 1.87
U2AF1-204ENST00000459639 CCDC51Q96ER9 411 aa26.72■■□□□ 1.87
U2AF1-204ENST00000459639 CBWD1Q9BRT8 395 aa26.72■■□□□ 1.87
U2AF1-204ENST00000459639 HSPBP1Q9NZL4 362 aa26.72■■□□□ 1.87
U2AF1-204ENST00000459639 SIK3Q9Y2K2 1263 aa26.72■■□□□ 1.87
U2AF1-204ENST00000459639 MAPK13O15264 365 aa26.71■■□□□ 1.87
U2AF1-204ENST00000459639 TRPA1O75762 1119 aa26.71■■□□□ 1.87
U2AF1-204ENST00000459639 F2P00734 622 aa26.71■■□□□ 1.87
U2AF1-204ENST00000459639 ADKP55263 362 aaKnown RBP26.71■■□□□ 1.87
U2AF1-204ENST00000459639 KCNH2Q12809 1159 aa26.71■■□□□ 1.87
U2AF1-204ENST00000459639 EFCAB12Q6NXP0 572 aa26.71■■□□□ 1.87
U2AF1-204ENST00000459639 PANX2Q96RD6 677 aa26.71■■□□□ 1.87
U2AF1-204ENST00000459639 TMX1Q9H3N1 280 aa26.71■■□□□ 1.87
U2AF1-204ENST00000459639 SUCLA2Q9P2R7 463 aaPredicted RBP26.71■■□□□ 1.87
U2AF1-204ENST00000459639 ANKRD63C9JTQ0 380 aa26.7■■□□□ 1.87
U2AF1-204ENST00000459639 HNRNPDLO14979 420 aaKnown RBP26.7■■□□□ 1.87
U2AF1-204ENST00000459639 PIGRP01833 764 aa26.7■■□□□ 1.87
U2AF1-204ENST00000459639 AFPP02771 609 aaKnown RBP26.7■■□□□ 1.87
U2AF1-204ENST00000459639 FXR1P51114 621 aaKnown RBP eCLIP26.7■■□□□ 1.87
U2AF1-204ENST00000459639 EFNA5P52803 228 aa26.7■■□□□ 1.87
U2AF1-204ENST00000459639 GOLGA8FQ08AF8 430 aa26.7■■□□□ 1.87
U2AF1-204ENST00000459639 GOLGA8DPQ0D2H9 430 aa26.7■■□□□ 1.87
U2AF1-204ENST00000459639 LAMTOR4Q0VGL1 99 aa26.7■■□□□ 1.87
U2AF1-204ENST00000459639 CDCA2Q69YH5 1023 aaPredicted RBP26.7■■□□□ 1.87
U2AF1-204ENST00000459639 TRPV1Q8NER1 839 aa26.7■■□□□ 1.87
U2AF1-204ENST00000459639 KIAA1524Q8TCG1 905 aa26.7■■□□□ 1.87
U2AF1-204ENST00000459639 K7ERI5 159 aa26.7■■□□□ 1.86
U2AF1-204ENST00000459639 ASAP2O43150 1006 aa26.7■■□□□ 1.86
U2AF1-204ENST00000459639 IGBP1P78318 339 aa26.7■■□□□ 1.86
U2AF1-204ENST00000459639 PPFIA1Q13136 1202 aa26.7■■□□□ 1.86
U2AF1-204ENST00000459639 TFDP1Q14186 410 aa26.7■■□□□ 1.86
U2AF1-204ENST00000459639 SLC39A4Q6P5W5 647 aa26.7■■□□□ 1.86
U2AF1-204ENST00000459639 LINC01465Q8N7H1 131 aa26.7■■□□□ 1.86
U2AF1-204ENST00000459639 CPLX3Q8WVH0 158 aa26.7■■□□□ 1.86
U2AF1-204ENST00000459639 SLC35C1Q96A29 364 aa26.7■■□□□ 1.86
U2AF1-204ENST00000459639 BICD1Q96G01 975 aa26.7■■□□□ 1.86
U2AF1-204ENST00000459639 PCMTD1Q96MG8 357 aaPredicted RBP26.7■■□□□ 1.86
U2AF1-204ENST00000459639 TTYH3Q9C0H2 523 aa26.7■■□□□ 1.86
U2AF1-204ENST00000459639 DUSP11O75319 330 aaKnown RBP26.69■■□□□ 1.86
U2AF1-204ENST00000459639 TRIM21P19474 475 aaKnown RBP26.69■■□□□ 1.86
U2AF1-204ENST00000459639 GARTP22102 1010 aa26.69■■□□□ 1.86
U2AF1-204ENST00000459639 KLRC1P26715 233 aa26.69■■□□□ 1.86
U2AF1-204ENST00000459639 CAP1Q01518 475 aa26.69■■□□□ 1.86
U2AF1-204ENST00000459639 DCAF17Q5H9S7 520 aaPredicted RBP26.69■■□□□ 1.86
U2AF1-204ENST00000459639 C2orf40Q9H1Z8 148 aa26.69■■□□□ 1.86
U2AF1-204ENST00000459639 PCIF1Q9H4Z3 704 aa26.69■■□□□ 1.86
U2AF1-204ENST00000459639 CAPN11Q9UMQ6 739 aa26.69■■□□□ 1.86
U2AF1-204ENST00000459639 ZNF500O60304 480 aaPredicted RBP26.68■■□□□ 1.86
U2AF1-204ENST00000459639 ADSSP30520 456 aa26.68■■□□□ 1.86
U2AF1-204ENST00000459639 KLK7P49862 253 aa26.68■■□□□ 1.86
U2AF1-204ENST00000459639 CLCN3P51790 818 aa26.68■■□□□ 1.86
U2AF1-204ENST00000459639 GRIK4Q16099 956 aa26.68■■□□□ 1.86
U2AF1-204ENST00000459639 ZBTB8OSQ8IWT0 167 aa26.68■■□□□ 1.86
U2AF1-204ENST00000459639 METTL13Q8N6R0 699 aa26.68■■□□□ 1.86
U2AF1-204ENST00000459639 A0A1W2PQJ5 194 aa26.67■■□□□ 1.86
U2AF1-204ENST00000459639 HOXD10P28358 340 aa26.67■■□□□ 1.86
U2AF1-204ENST00000459639 LIG4P49917 911 aa26.67■■□□□ 1.86
U2AF1-204ENST00000459639 TCERG1LQ5VWI1 586 aa26.67■■□□□ 1.86
U2AF1-204ENST00000459639 MTHFD1LQ6UB35 978 aa26.67■■□□□ 1.86
U2AF1-204ENST00000459639 INTS8Q75QN2 995 aaKnown RBP26.67■■□□□ 1.86
U2AF1-204ENST00000459639 RHPN2Q8IUC4 686 aa26.67■■□□□ 1.86
U2AF1-204ENST00000459639 TMEM139Q8IV31 216 aa26.67■■□□□ 1.86
U2AF1-204ENST00000459639 TTC26A0AVF1 554 aa26.66■■□□□ 1.86
U2AF1-204ENST00000459639 RRN3P2A6NIE6 340 aa26.66■■□□□ 1.86
U2AF1-204ENST00000459639 KRT13P13646 458 aa26.66■■□□□ 1.86
U2AF1-204ENST00000459639 KCNJ6P48051 423 aa26.66■■□□□ 1.86
U2AF1-204ENST00000459639 BFSP1Q12934 665 aa26.66■■□□□ 1.86
U2AF1-204ENST00000459639 RNF149Q8NC42 400 aa26.66■■□□□ 1.86
U2AF1-204ENST00000459639 KAT2BQ92831 832 aa26.66■■□□□ 1.86
U2AF1-204ENST00000459639 BAG1Q99933 345 aaPredicted RBP26.66■■□□□ 1.86
U2AF1-204ENST00000459639 CCDC113Q9H0I3 377 aa26.66■■□□□ 1.86
U2AF1-204ENST00000459639 SRRDQ9UH36 339 aa26.66■■□□□ 1.86
U2AF1-204ENST00000459639 LUC7L2Q9Y383 392 aaKnown RBP26.66■■□□□ 1.86
U2AF1-204ENST00000459639 STYXL1Q9Y6J8 313 aa26.66■■□□□ 1.86
U2AF1-204ENST00000459639 KIAA0391O15091 583 aaKnown RBP26.66■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms