RNA–Protein interactions for RNA: ENST00000457422.6

CCDC43-202, Transcript of coiled-coil domain containing 43, humanhuman

TSL 1 (best) BASIC

Gene CCDC43, Length 2,058 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-202ENST00000457422 NR3C2P08235 984 aa18.12■□□□□ 0.49
CCDC43-202ENST00000457422 MRPS25P82663 173 aaKnown RBP18.12■□□□□ 0.49
CCDC43-202ENST00000457422 RPS6KA1Q15418 735 aa18.12■□□□□ 0.49
CCDC43-202ENST00000457422 HSP90B2PQ58FF3 399 aa18.12■□□□□ 0.49
CCDC43-202ENST00000457422 XKR9Q5GH70 373 aa18.12■□□□□ 0.49
CCDC43-202ENST00000457422 NLRX1Q86UT6 975 aa18.12■□□□□ 0.49
CCDC43-202ENST00000457422 U2AF1L4Q8WU68 220 aaKnown RBP18.12■□□□□ 0.49
CCDC43-202ENST00000457422 LMBR1Q8WVP7 490 aa18.12■□□□□ 0.49
CCDC43-202ENST00000457422 EXOC4Q96A65 974 aa18.12■□□□□ 0.49
CCDC43-202ENST00000457422 PBKQ96KB5 322 aa18.12■□□□□ 0.49
CCDC43-202ENST00000457422 MOV10L1Q9BXT6 1211 aaKnown RBP18.12■□□□□ 0.49
CCDC43-202ENST00000457422 PSD3Q9NYI0 1048 aa18.12■□□□□ 0.49
CCDC43-202ENST00000457422 ZNF214Q9UL59 606 aaPredicted RBP18.12■□□□□ 0.49
CCDC43-202ENST00000457422 NCANO14594 1321 aa18.12■□□□□ 0.49
CCDC43-202ENST00000457422 EMSYQ7Z589 1322 aa18.12■□□□□ 0.49
CCDC43-202ENST00000457422 SLC16A4O15374 487 aa18.11■□□□□ 0.49
CCDC43-202ENST00000457422 NOP2P46087 812 aaKnown RBP18.11■□□□□ 0.49
CCDC43-202ENST00000457422 PEX3P56589 373 aa18.11■□□□□ 0.49
CCDC43-202ENST00000457422 DLG4P78352 724 aa18.11■□□□□ 0.49
CCDC43-202ENST00000457422 CETN1Q12798 172 aa18.11■□□□□ 0.49
CCDC43-202ENST00000457422 KIF22Q14807 665 aa18.11■□□□□ 0.49
CCDC43-202ENST00000457422 FAM102BQ5T8I3 360 aa18.11■□□□□ 0.49
CCDC43-202ENST00000457422 PHLDB3Q6NSJ2 640 aa18.11■□□□□ 0.49
CCDC43-202ENST00000457422 TAF4BQ92750 862 aa18.11■□□□□ 0.49
CCDC43-202ENST00000457422 HINFPQ9BQA5 517 aa18.11■□□□□ 0.49
CCDC43-202ENST00000457422 ADAM21Q9UKJ8 722 aa18.11■□□□□ 0.49
CCDC43-202ENST00000457422 USP20Q9Y2K6 914 aa18.11■□□□□ 0.49
CCDC43-202ENST00000457422 PCDHA10Q9Y5I2 948 aa18.11■□□□□ 0.49
CCDC43-202ENST00000457422 ZBTB48P10074 688 aaPredicted RBP18.11■□□□□ 0.49
CCDC43-202ENST00000457422 EPC2Q52LR7 807 aa18.11■□□□□ 0.49
CCDC43-202ENST00000457422 ZSWIM2Q8NEG5 633 aa18.11■□□□□ 0.49
CCDC43-202ENST00000457422 TRPM4Q8TD43 1214 aa18.11■□□□□ 0.49
CCDC43-202ENST00000457422 TMEM59LQ9UK28 342 aa18.11■□□□□ 0.49
CCDC43-202ENST00000457422 CD2APQ9Y5K6 639 aa18.11■□□□□ 0.49
CCDC43-202ENST00000457422 TMEM253P0C7T8 217 aa18.1■□□□□ 0.49
CCDC43-202ENST00000457422 GALCP54803 685 aa18.1■□□□□ 0.49
CCDC43-202ENST00000457422 PPP3CAQ08209 521 aa18.1■□□□□ 0.49
CCDC43-202ENST00000457422 C1orf220Q5T0J3 134 aa18.1■□□□□ 0.49
CCDC43-202ENST00000457422 ANO5Q75V66 913 aa18.1■□□□□ 0.49
CCDC43-202ENST00000457422 SYCE1Q8N0S2 351 aa18.1■□□□□ 0.49
CCDC43-202ENST00000457422 USP38Q8NB14 1042 aa18.1■□□□□ 0.49
CCDC43-202ENST00000457422 NSUN6Q8TEA1 469 aaKnown RBP18.1■□□□□ 0.49
CCDC43-202ENST00000457422 CCDC102AQ96A19 550 aa18.1■□□□□ 0.49
CCDC43-202ENST00000457422 GOLPH3Q9H4A6 298 aa18.1■□□□□ 0.49
CCDC43-202ENST00000457422 C17orf75Q9HAS0 396 aa18.1■□□□□ 0.49
CCDC43-202ENST00000457422 EXOC7Q9UPT5 735 aa18.1■□□□□ 0.49
CCDC43-202ENST00000457422 STXBP5LQ9Y2K9 1186 aa18.1■□□□□ 0.49
CCDC43-202ENST00000457422 A0A0U1RQG5 324 aaPredicted RBP18.1■□□□□ 0.49
CCDC43-202ENST00000457422 DKC1O60832 514 aaKnown RBP eCLIP18.1■□□□□ 0.49
CCDC43-202ENST00000457422 KCNA2P16389 499 aa18.1■□□□□ 0.49
CCDC43-202ENST00000457422 EPHB4P54760 987 aa18.1■□□□□ 0.49
CCDC43-202ENST00000457422 SLC7A5Q01650 507 aa18.1■□□□□ 0.49
CCDC43-202ENST00000457422 EMBQ6PCB8 327 aa18.1■□□□□ 0.49
CCDC43-202ENST00000457422 MAP4K3Q8IVH8 894 aa18.1■□□□□ 0.49
CCDC43-202ENST00000457422 GLYCTKQ8IVS8 523 aa18.1■□□□□ 0.49
CCDC43-202ENST00000457422 TMEM161BQ8NDZ6 487 aa18.1■□□□□ 0.49
CCDC43-202ENST00000457422 ACTRT1Q8TDG2 376 aa18.1■□□□□ 0.49
CCDC43-202ENST00000457422 GDAP1L1Q96MZ0 367 aa18.1■□□□□ 0.49
CCDC43-202ENST00000457422 SUCLA2Q9P2R7 463 aaPredicted RBP18.1■□□□□ 0.49
CCDC43-202ENST00000457422 NFASCO94856 1347 aa18.09■□□□□ 0.49
CCDC43-202ENST00000457422 SYF2O95926 243 aaKnown RBP18.09■□□□□ 0.49
CCDC43-202ENST00000457422 SMTNP53814 917 aa18.09■□□□□ 0.49
CCDC43-202ENST00000457422 GYS2P54840 703 aa18.09■□□□□ 0.49
CCDC43-202ENST00000457422 TMEM132BQ14DG7 1078 aa18.09■□□□□ 0.49
CCDC43-202ENST00000457422 ARHGAP44Q17R89 818 aa18.09■□□□□ 0.49
CCDC43-202ENST00000457422 OTUD6AQ7L8S5 288 aa18.09■□□□□ 0.49
CCDC43-202ENST00000457422 SPIRE2Q8WWL2 714 aa18.09■□□□□ 0.49
CCDC43-202ENST00000457422 RFFLQ8WZ73 363 aa18.09■□□□□ 0.49
CCDC43-202ENST00000457422 ATP6V0A1Q93050 837 aa18.09■□□□□ 0.49
CCDC43-202ENST00000457422 NTPCRQ9BSD7 190 aaKnown RBP18.09■□□□□ 0.49
CCDC43-202ENST00000457422 GDF3Q9NR23 364 aa18.09■□□□□ 0.49
CCDC43-202ENST00000457422 VPS18Q9P253 973 aa18.09■□□□□ 0.49
CCDC43-202ENST00000457422 TBX20Q9UMR3 447 aa18.09■□□□□ 0.49
CCDC43-202ENST00000457422 SSC5DA1L4H1 1573 aa18.09■□□□□ 0.49
CCDC43-202ENST00000457422 LCTP09848 1927 aa18.09■□□□□ 0.49
CCDC43-202ENST00000457422 WDR90Q96KV7 1748 aa18.08■□□□□ 0.49
CCDC43-202ENST00000457422 KCNK3O14649 394 aa18.08■□□□□ 0.49
CCDC43-202ENST00000457422 STAM2O75886 525 aa18.08■□□□□ 0.49
CCDC43-202ENST00000457422 RGS20O76081 388 aa18.08■□□□□ 0.49
CCDC43-202ENST00000457422 DMP1Q13316 513 aaPredicted RBP18.08■□□□□ 0.49
CCDC43-202ENST00000457422 NOL9Q5SY16 702 aaKnown RBP18.08■□□□□ 0.49
CCDC43-202ENST00000457422 CATSPERGQ6ZRH7 1159 aa18.08■□□□□ 0.49
CCDC43-202ENST00000457422 PLEKHO2Q8TD55 490 aa18.08■□□□□ 0.49
CCDC43-202ENST00000457422 KIFAP3Q92845 792 aa18.08■□□□□ 0.49
CCDC43-202ENST00000457422 CAVIN3Q969G5 261 aa18.08■□□□□ 0.49
CCDC43-202ENST00000457422 KLRG1Q96E93 195 aa18.08■□□□□ 0.49
CCDC43-202ENST00000457422 CDHR1Q96JP9 859 aa18.08■□□□□ 0.49
CCDC43-202ENST00000457422 KIFC3Q9BVG8 833 aa18.08■□□□□ 0.49
CCDC43-202ENST00000457422 TEX13BQ9BXU2 312 aa18.08■□□□□ 0.49
CCDC43-202ENST00000457422 FAN1Q9Y2M0 1017 aa18.08■□□□□ 0.49
CCDC43-202ENST00000457422 PPP2R3BQ9Y5P8 575 aa18.08■□□□□ 0.49
CCDC43-202ENST00000457422 MYPNQ86TC9 1320 aa18.08■□□□□ 0.49
CCDC43-202ENST00000457422 DOCK5Q9H7D0 1870 aa18.08■□□□□ 0.48
CCDC43-202ENST00000457422 FOXN3O00409 490 aaPredicted RBP18.08■□□□□ 0.48
CCDC43-202ENST00000457422 LRRN2O75325 713 aa18.08■□□□□ 0.48
CCDC43-202ENST00000457422 STBD1O95210 358 aa18.08■□□□□ 0.48
CCDC43-202ENST00000457422 NPTX2P47972 431 aa18.08■□□□□ 0.48
CCDC43-202ENST00000457422 GCLMP48507 274 aa18.08■□□□□ 0.48
CCDC43-202ENST00000457422 PTPROQ16827 1216 aa18.08■□□□□ 0.48
CCDC43-202ENST00000457422 IFT20Q8IY31 132 aa18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms