RNA–Protein interactions for RNA: ENST00000457368.2

NEDD1-204, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 2 BASIC

Gene NEDD1, Length 3,162 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-204ENST00000457368 GPR179Q6PRD1 2367 aa2.48□□□□□ -2.01
NEDD1-204ENST00000457368 USP24Q9UPU5 2620 aa2.48□□□□□ -2.01
NEDD1-204ENST00000457368 KDM3AQ9Y4C1 1321 aa2.48□□□□□ -2.01
NEDD1-204ENST00000457368 MYO7AQ13402 2215 aa2.48□□□□□ -2.01
NEDD1-204ENST00000457368 TTC3P53804 2025 aa2.48□□□□□ -2.01
NEDD1-204ENST00000457368 NLRC5Q86WI3 1866 aa2.48□□□□□ -2.01
NEDD1-204ENST00000457368 ELOA3CA0A087WX78 387 aaPredicted RBP2.48□□□□□ -2.01
NEDD1-204ENST00000457368 MBLAC1A4D2B0 266 aaPredicted RBP2.48□□□□□ -2.01
NEDD1-204ENST00000457368 ELOA3DA6NLF2 546 aaPredicted RBP2.48□□□□□ -2.01
NEDD1-204ENST00000457368 TM4SF5O14894 197 aa2.48□□□□□ -2.01
NEDD1-204ENST00000457368 SURF6O75683 361 aaKnown RBP2.48□□□□□ -2.01
NEDD1-204ENST00000457368 CHRNA1P02708 482 aa2.48□□□□□ -2.01
NEDD1-204ENST00000457368 SMIM10L2AP0DMW4 78 aa2.48□□□□□ -2.01
NEDD1-204ENST00000457368 SMIM10L2BP0DMW5 78 aa2.48□□□□□ -2.01
NEDD1-204ENST00000457368 SNHG28P0DPA3 235 aa2.48□□□□□ -2.01
NEDD1-204ENST00000457368 ATP5JP18859 108 aa2.48□□□□□ -2.01
NEDD1-204ENST00000457368 GNAT2P19087 354 aa2.48□□□□□ -2.01
NEDD1-204ENST00000457368 EIF2AK2P19525 551 aaKnown RBP2.48□□□□□ -2.01
NEDD1-204ENST00000457368 TECP42680 631 aa2.48□□□□□ -2.01
NEDD1-204ENST00000457368 STARD6P59095 220 aa2.48□□□□□ -2.01
NEDD1-204ENST00000457368 ZNF200P98182 395 aaPredicted RBP2.48□□□□□ -2.01
NEDD1-204ENST00000457368 LPIN1Q14693 890 aa2.48□□□□□ -2.01
NEDD1-204ENST00000457368 NONOQ15233 471 aaKnown RBP eCLIP2.48□□□□□ -2.01
NEDD1-204ENST00000457368 STXBP2Q15833 593 aa2.48□□□□□ -2.01
NEDD1-204ENST00000457368 ELOA3BQ3SY89 546 aa2.48□□□□□ -2.01
NEDD1-204ENST00000457368 HSP90AB4PQ58FF6 505 aa2.48□□□□□ -2.01
NEDD1-204ENST00000457368 FBXO47Q5MNV8 452 aa2.48□□□□□ -2.01
NEDD1-204ENST00000457368 CELF3Q5SZQ8 465 aaKnown RBP2.48□□□□□ -2.01
NEDD1-204ENST00000457368 ZNF468Q5VIY5 522 aaPredicted RBP2.48□□□□□ -2.01
NEDD1-204ENST00000457368 SYDE2Q5VT97 1194 aa2.48□□□□□ -2.01
NEDD1-204ENST00000457368 CES5AQ6NT32 575 aa2.48□□□□□ -2.01
NEDD1-204ENST00000457368 LINC00114Q6XXX2 140 aa2.48□□□□□ -2.01
NEDD1-204ENST00000457368 TSHZ1Q6ZSZ6 1077 aa2.48□□□□□ -2.01
NEDD1-204ENST00000457368 OTOP3Q7RTS5 596 aa2.48□□□□□ -2.01
NEDD1-204ENST00000457368 ZNF444Q8N0Y2 327 aaPredicted RBP2.48□□□□□ -2.01
NEDD1-204ENST00000457368 ELOA3Q8NG57 546 aa2.48□□□□□ -2.01
NEDD1-204ENST00000457368 C1orf216Q8TAB5 229 aa2.48□□□□□ -2.01
NEDD1-204ENST00000457368 SYTL5Q8TDW5 730 aaPredicted RBP2.48□□□□□ -2.01
NEDD1-204ENST00000457368 NSUN6Q8TEA1 469 aaKnown RBP2.48□□□□□ -2.01
NEDD1-204ENST00000457368 ZDHHC1Q8WTX9 485 aa2.48□□□□□ -2.01
NEDD1-204ENST00000457368 MRPS27Q92552 414 aaKnown RBP2.48□□□□□ -2.01
NEDD1-204ENST00000457368 ATP6V0A1Q93050 837 aa2.48□□□□□ -2.01
NEDD1-204ENST00000457368 IER2Q9BTL4 223 aa2.48□□□□□ -2.01
NEDD1-204ENST00000457368 ELAC1Q9H777 363 aaKnown RBP2.48□□□□□ -2.01
NEDD1-204ENST00000457368 MKNK2Q9HBH9 465 aa2.48□□□□□ -2.01
NEDD1-204ENST00000457368 ZNF358Q9NW07 568 aa2.48□□□□□ -2.01
NEDD1-204ENST00000457368 EPS15L1Q9UBC2 864 aa2.48□□□□□ -2.01
NEDD1-204ENST00000457368 SLC4A4Q9Y6R1 1079 aa2.48□□□□□ -2.01
NEDD1-204ENST00000457368 R4GN57 208 aa2.48□□□□□ -2.01
NEDD1-204ENST00000457368 CHD6Q8TD26 2715 aa2.48□□□□□ -2.01
NEDD1-204ENST00000457368 MAP1BP46821 2468 aaKnown RBP2.48□□□□□ -2.01
NEDD1-204ENST00000457368 ZNF292O60281 2723 aa2.47□□□□□ -2.01
NEDD1-204ENST00000457368 REV3LO60673 3130 aa2.47□□□□□ -2.01
NEDD1-204ENST00000457368 MYO5AQ9Y4I1 1855 aaKnown RBP2.47□□□□□ -2.01
NEDD1-204ENST00000457368 J3QW42 95 aa2.47□□□□□ -2.01
NEDD1-204ENST00000457368 SPATA31C1P0DKV0 1188 aa2.47□□□□□ -2.01
NEDD1-204ENST00000457368 ARAFP10398 606 aa2.47□□□□□ -2.01
NEDD1-204ENST00000457368 LAG3P18627 525 aa2.47□□□□□ -2.01
NEDD1-204ENST00000457368 ITGB7P26010 798 aa2.47□□□□□ -2.01
NEDD1-204ENST00000457368 NOS2P35228 1153 aa2.47□□□□□ -2.01
NEDD1-204ENST00000457368 SARSP49591 514 aaKnown RBP2.47□□□□□ -2.01
NEDD1-204ENST00000457368 FAM189BP81408 668 aa2.47□□□□□ -2.01
NEDD1-204ENST00000457368 GIT2Q14161 759 aa2.47□□□□□ -2.01
NEDD1-204ENST00000457368 ATAT1Q5SQI0 421 aa2.47□□□□□ -2.01
NEDD1-204ENST00000457368 RTN4RL1Q86UN2 441 aaPredicted RBP2.47□□□□□ -2.01
NEDD1-204ENST00000457368 AGGF1Q8N302 714 aaeCLIP2.47□□□□□ -2.01
NEDD1-204ENST00000457368 DCLK2Q8N568 766 aa2.47□□□□□ -2.01
NEDD1-204ENST00000457368 SLC22A17Q8WUG5 538 aa2.47□□□□□ -2.01
NEDD1-204ENST00000457368 ALG1Q9BT22 464 aa2.47□□□□□ -2.01
NEDD1-204ENST00000457368 RXFP3Q9NSD7 469 aa2.47□□□□□ -2.01
NEDD1-204ENST00000457368 C1orf112Q9NSG2 853 aa2.47□□□□□ -2.01
NEDD1-204ENST00000457368 TCP11L1Q9NUJ3 509 aa2.47□□□□□ -2.01
NEDD1-204ENST00000457368 ZSCAN32Q9NX65 697 aa2.47□□□□□ -2.01
NEDD1-204ENST00000457368 PCDHB12Q9Y5F1 795 aa2.47□□□□□ -2.01
NEDD1-204ENST00000457368 TRIP12Q14669 1992 aaPredicted RBP2.47□□□□□ -2.01
NEDD1-204ENST00000457368 H3BRB1 525 aa2.47□□□□□ -2.01
NEDD1-204ENST00000457368 IPO8O15397 1037 aaKnown RBP2.47□□□□□ -2.01
NEDD1-204ENST00000457368 TREHO43280 583 aa2.47□□□□□ -2.01
NEDD1-204ENST00000457368 ORC4O43929 436 aa2.47□□□□□ -2.01
NEDD1-204ENST00000457368 CLASP2O75122 1294 aaKnown RBP2.47□□□□□ -2.01
NEDD1-204ENST00000457368 RGS9O75916 674 aaPredicted RBP2.47□□□□□ -2.01
NEDD1-204ENST00000457368 FGF18O76093 207 aa2.47□□□□□ -2.01
NEDD1-204ENST00000457368 LGALS2P05162 132 aa2.47□□□□□ -2.01
NEDD1-204ENST00000457368 SRFP11831 508 aa2.47□□□□□ -2.01
NEDD1-204ENST00000457368 GLB1P16278 677 aa2.47□□□□□ -2.01
NEDD1-204ENST00000457368 HOXB4P17483 251 aaPredicted RBP2.47□□□□□ -2.01
NEDD1-204ENST00000457368 SSTR4P31391 388 aa2.47□□□□□ -2.01
NEDD1-204ENST00000457368 PPM1AP35813 382 aa2.47□□□□□ -2.01
NEDD1-204ENST00000457368 RARSP54136 660 aaKnown RBP2.47□□□□□ -2.01
NEDD1-204ENST00000457368 ERVFC1P60507 584 aa2.47□□□□□ -2.01
NEDD1-204ENST00000457368 LY6KQ17RY6 165 aa2.47□□□□□ -2.01
NEDD1-204ENST00000457368 FOXD4L6Q3SYB3 417 aaPredicted RBP2.47□□□□□ -2.01
NEDD1-204ENST00000457368 PPM1JQ5JR12 505 aa2.47□□□□□ -2.01
NEDD1-204ENST00000457368 FOXD4L3Q6VB84 417 aaPredicted RBP2.47□□□□□ -2.01
NEDD1-204ENST00000457368 RUFY4Q6ZNE9 571 aa2.47□□□□□ -2.01
NEDD1-204ENST00000457368 C15orf39Q6ZRI6 1047 aa2.47□□□□□ -2.01
NEDD1-204ENST00000457368 GPR149Q86SP6 731 aa2.47□□□□□ -2.01
NEDD1-204ENST00000457368 MCF2L2Q86YR7 1114 aa2.47□□□□□ -2.01
NEDD1-204ENST00000457368 PLEKHM2Q8IWE5 1019 aa2.47□□□□□ -2.01
NEDD1-204ENST00000457368 MRPL43Q8N983 215 aaKnown RBP2.47□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms