RNA–Protein interactions for RNA: ENST00000457212.5

FAM3A-217, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 5

Gene FAM3A, Length 905 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-217ENST00000457212 FAM228AQ86W67 206 aa22.7■■□□□ 1.22
FAM3A-217ENST00000457212 CCDC65Q8IXS2 484 aa22.7■■□□□ 1.22
FAM3A-217ENST00000457212 MYCT1Q8N699 235 aa22.7■■□□□ 1.22
FAM3A-217ENST00000457212 DBF4BQ8NFT6 615 aa22.7■■□□□ 1.22
FAM3A-217ENST00000457212 FTHL17Q9BXU8 183 aa22.7■■□□□ 1.22
FAM3A-217ENST00000457212 KMT5AQ9NQR1 393 aa22.7■■□□□ 1.22
FAM3A-217ENST00000457212 SEL1LQ9UBV2 794 aa22.7■■□□□ 1.22
FAM3A-217ENST00000457212 ST3GAL5Q9UNP4 418 aa22.7■■□□□ 1.22
FAM3A-217ENST00000457212 PHLPP2Q6ZVD8 1323 aa22.7■■□□□ 1.22
FAM3A-217ENST00000457212 TET1Q8NFU7 2136 aa22.7■■□□□ 1.22
FAM3A-217ENST00000457212 FRMD3A2A2Y4 597 aa22.69■■□□□ 1.22
FAM3A-217ENST00000457212 CCDC169A6NNP5 214 aa22.69■■□□□ 1.22
FAM3A-217ENST00000457212 H0YCG3 227 aa22.69■■□□□ 1.22
FAM3A-217ENST00000457212 EFCAB14O75071 495 aa22.69■■□□□ 1.22
FAM3A-217ENST00000457212 LIG1P18858 919 aa22.69■■□□□ 1.22
FAM3A-217ENST00000457212 EPHB4P54760 987 aa22.69■■□□□ 1.22
FAM3A-217ENST00000457212 SLC17A8Q8NDX2 589 aa22.69■■□□□ 1.22
FAM3A-217ENST00000457212 UBE2OQ9C0C9 1292 aaKnown RBP22.69■■□□□ 1.22
FAM3A-217ENST00000457212 ZHX3Q9H4I2 956 aa22.69■■□□□ 1.22
FAM3A-217ENST00000457212 LMBRD1Q9NUN5 540 aa22.69■■□□□ 1.22
FAM3A-217ENST00000457212 ABHD14A-ACY1A0A1B0GW23 586 aa22.68■■□□□ 1.22
FAM3A-217ENST00000457212 INO80B-WBP1J3KQ70 363 aa22.68■■□□□ 1.22
FAM3A-217ENST00000457212 GTPBP6O43824 516 aaPredicted RBP22.68■■□□□ 1.22
FAM3A-217ENST00000457212 KINO60870 393 aaKnown RBP22.68■■□□□ 1.22
FAM3A-217ENST00000457212 NR1I2O75469 434 aa22.68■■□□□ 1.22
FAM3A-217ENST00000457212 BAIAP3O94812 1187 aa22.68■■□□□ 1.22
FAM3A-217ENST00000457212 IDEP14735 1019 aa22.68■■□□□ 1.22
FAM3A-217ENST00000457212 ABCD1P33897 745 aa22.68■■□□□ 1.22
FAM3A-217ENST00000457212 ASIC1P78348 528 aa22.68■■□□□ 1.22
FAM3A-217ENST00000457212 MBTD1Q05BQ5 628 aa22.68■■□□□ 1.22
FAM3A-217ENST00000457212 NFX1Q12986 1120 aaKnown RBP22.68■■□□□ 1.22
FAM3A-217ENST00000457212 IKBKEQ14164 716 aa22.68■■□□□ 1.22
FAM3A-217ENST00000457212 TMEM240Q5SV17 173 aa22.68■■□□□ 1.22
FAM3A-217ENST00000457212 ZNF365Q70YC5 407 aa22.68■■□□□ 1.22
FAM3A-217ENST00000457212 CATSPER4Q7RTX7 472 aa22.68■■□□□ 1.22
FAM3A-217ENST00000457212 KCNN1Q92952 543 aa22.68■■□□□ 1.22
FAM3A-217ENST00000457212 BUD13Q9BRD0 619 aaKnown RBP eCLIP22.68■■□□□ 1.224e-6■■□□□ 12.7
FAM3A-217ENST00000457212 MINDY3Q9H8M7 445 aa22.68■■□□□ 1.22
FAM3A-217ENST00000457212 PANK4Q9NVE7 773 aa22.68■■□□□ 1.22
FAM3A-217ENST00000457212 HOOK1Q9UJC3 728 aaKnown RBP22.68■■□□□ 1.22
FAM3A-217ENST00000457212 PVALEFA0A1B0GWK0 134 aa22.67■■□□□ 1.22
FAM3A-217ENST00000457212 TRAK2O60296 914 aa22.67■■□□□ 1.22
FAM3A-217ENST00000457212 MAPTP10636 758 aaKnown RBP22.67■■□□□ 1.22
FAM3A-217ENST00000457212 NCKAP1LP55160 1127 aa22.67■■□□□ 1.22
FAM3A-217ENST00000457212 PPP4R3CPQ6ZMV5 832 aa22.67■■□□□ 1.22
FAM3A-217ENST00000457212 FAM178BQ8IXR5 827 aa22.67■■□□□ 1.22
FAM3A-217ENST00000457212 ELOA2Q8IYF1 753 aaPredicted RBP22.67■■□□□ 1.22
FAM3A-217ENST00000457212 GRAMD1CQ8IYS0 662 aa22.67■■□□□ 1.22
FAM3A-217ENST00000457212 PRIMPOLQ96LW4 560 aa22.67■■□□□ 1.22
FAM3A-217ENST00000457212 MTIF3Q9H2K0 278 aaKnown RBP22.67■■□□□ 1.22
FAM3A-217ENST00000457212 TMEM134Q9H6X4 195 aa22.67■■□□□ 1.22
FAM3A-217ENST00000457212 CHST12Q9NRB3 414 aa22.67■■□□□ 1.22
FAM3A-217ENST00000457212 OLFML3Q9NRN5 406 aa22.67■■□□□ 1.22
FAM3A-217ENST00000457212 PRMT7Q9NVM4 692 aaPredicted RBP22.67■■□□□ 1.22
FAM3A-217ENST00000457212 ARHGAP28Q9P2N2 729 aa22.67■■□□□ 1.22
FAM3A-217ENST00000457212 ADGRA3Q8IWK6 1321 aa22.66■■□□□ 1.22
FAM3A-217ENST00000457212 CSDE1O75534 798 aaKnown RBP22.66■■□□□ 1.22
FAM3A-217ENST00000457212 ERLIN2O94905 339 aa22.66■■□□□ 1.22
FAM3A-217ENST00000457212 NCBP1Q09161 790 aaKnown RBP22.66■■□□□ 1.22
FAM3A-217ENST00000457212 CUL4BQ13620 913 aa22.66■■□□□ 1.22
FAM3A-217ENST00000457212 MAPK6Q16659 721 aa22.66■■□□□ 1.22
FAM3A-217ENST00000457212 FAM187BQ17R55 369 aa22.66■■□□□ 1.22
FAM3A-217ENST00000457212 HERC4Q5GLZ8 1057 aaPredicted RBP22.66■■□□□ 1.22
FAM3A-217ENST00000457212 PRPF38BQ5VTL8 546 aaKnown RBP22.66■■□□□ 1.22
FAM3A-217ENST00000457212 UNC13DQ70J99 1090 aa22.66■■□□□ 1.22
FAM3A-217ENST00000457212 HERVK_113Q902F9 699 aa22.66■■□□□ 1.22
FAM3A-217ENST00000457212 KIFC3Q9BVG8 833 aa22.66■■□□□ 1.22
FAM3A-217ENST00000457212 CCDC113Q9H0I3 377 aa22.66■■□□□ 1.22
FAM3A-217ENST00000457212 BLZF1Q9H2G9 400 aa22.66■■□□□ 1.22
FAM3A-217ENST00000457212 FZD8Q9H461 694 aa22.66■■□□□ 1.22
FAM3A-217ENST00000457212 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP22.65■■□□□ 1.22
FAM3A-217ENST00000457212 K7ERI5 159 aa22.65■■□□□ 1.22
FAM3A-217ENST00000457212 SLC16A4O15374 487 aa22.65■■□□□ 1.22
FAM3A-217ENST00000457212 FGFR4P22455 802 aa22.65■■□□□ 1.22
FAM3A-217ENST00000457212 AXLP30530 894 aa22.65■■□□□ 1.22
FAM3A-217ENST00000457212 SFR1Q86XK3 245 aa22.65■■□□□ 1.22
FAM3A-217ENST00000457212 TMEM161BQ8NDZ6 487 aa22.65■■□□□ 1.22
FAM3A-217ENST00000457212 TMX1Q9H3N1 280 aa22.65■■□□□ 1.22
FAM3A-217ENST00000457212 ST6GALNAC4Q9H4F1 302 aa22.65■■□□□ 1.22
FAM3A-217ENST00000457212 AGPAT5Q9NUQ2 364 aa22.65■■□□□ 1.22
FAM3A-217ENST00000457212 DACT1Q9NYF0 836 aa22.65■■□□□ 1.22
FAM3A-217ENST00000457212 ACKR2O00590 384 aa22.64■■□□□ 1.21
FAM3A-217ENST00000457212 ZSCAN20P17040 1043 aaPredicted RBP22.64■■□□□ 1.21
FAM3A-217ENST00000457212 COASYQ13057 564 aa22.64■■□□□ 1.21
FAM3A-217ENST00000457212 POSTNQ15063 836 aa22.64■■□□□ 1.21
FAM3A-217ENST00000457212 AMHR2Q16671 573 aa22.64■■□□□ 1.21
FAM3A-217ENST00000457212 TCTN1Q2MV58 587 aa22.64■■□□□ 1.21
FAM3A-217ENST00000457212 OTOP2Q7RTS6 562 aa22.64■■□□□ 1.21
FAM3A-217ENST00000457212 HAUS6Q7Z4H7 955 aa22.64■■□□□ 1.21
FAM3A-217ENST00000457212 FIZ1Q96SL8 496 aa22.64■■□□□ 1.21
FAM3A-217ENST00000457212 DENND3A2RUS2 1198 aa22.63■■□□□ 1.21
FAM3A-217ENST00000457212 K7ENM7 598 aa22.63■■□□□ 1.21
FAM3A-217ENST00000457212 TSPAN1O60635 241 aa22.63■■□□□ 1.21
FAM3A-217ENST00000457212 PRKCBP05771 671 aa22.63■■□□□ 1.21
FAM3A-217ENST00000457212 CASP1P29466 404 aa22.63■■□□□ 1.21
FAM3A-217ENST00000457212 DPYDQ12882 1025 aa22.63■■□□□ 1.21
FAM3A-217ENST00000457212 STRN3Q13033 797 aa22.63■■□□□ 1.21
FAM3A-217ENST00000457212 DSC3Q14574 896 aa22.63■■□□□ 1.21
FAM3A-217ENST00000457212 ZNF720Q7Z2F6 126 aa22.63■■□□□ 1.21
FAM3A-217ENST00000457212 CCDC47Q96A33 483 aaKnown RBP22.63■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms