RNA–Protein interactions for RNA: ENST00000457039.6

SMPD4-215, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 940 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-215ENST00000457039 DDX12PQ92771 950 aa15.62■□□□□ 0.09
SMPD4-215ENST00000457039 IFT74Q96LB3 600 aa15.62■□□□□ 0.09
SMPD4-215ENST00000457039 NTPCRQ9BSD7 190 aaKnown RBP15.62■□□□□ 0.09
SMPD4-215ENST00000457039 KIFC3Q9BVG8 833 aa15.62■□□□□ 0.09
SMPD4-215ENST00000457039 CCDC113Q9H0I3 377 aa15.62■□□□□ 0.09
SMPD4-215ENST00000457039 C2orf40Q9H1Z8 148 aa15.62■□□□□ 0.09
SMPD4-215ENST00000457039 MAGEF1Q9HAY2 307 aa15.62■□□□□ 0.09
SMPD4-215ENST00000457039 ARHGAP28Q9P2N2 729 aa15.62■□□□□ 0.09
SMPD4-215ENST00000457039 PTPRSQ13332 1948 aa15.61■□□□□ 0.09
SMPD4-215ENST00000457039 FRMD3A2A2Y4 597 aa15.61■□□□□ 0.09
SMPD4-215ENST00000457039 SLFN14P0C7P3 912 aa15.61■□□□□ 0.09
SMPD4-215ENST00000457039 SYKP43405 635 aa15.61■□□□□ 0.09
SMPD4-215ENST00000457039 DMP1Q13316 513 aaPredicted RBP15.61■□□□□ 0.09
SMPD4-215ENST00000457039 CSPP1Q1MSJ5 1256 aa15.61■□□□□ 0.09
SMPD4-215ENST00000457039 LRIT3Q3SXY7 679 aa15.61■□□□□ 0.09
SMPD4-215ENST00000457039 FAM109BQ6ICB4 259 aaPredicted RBP15.61■□□□□ 0.09
SMPD4-215ENST00000457039 CNNM4Q6P4Q7 775 aa15.61■□□□□ 0.09
SMPD4-215ENST00000457039 PPP4R3CPQ6ZMV5 832 aa15.61■□□□□ 0.09
SMPD4-215ENST00000457039 CATSPER4Q7RTX7 472 aa15.61■□□□□ 0.09
SMPD4-215ENST00000457039 CRIPAKQ8N1N5 446 aa15.61■□□□□ 0.09
SMPD4-215ENST00000457039 PHOSPHO2Q8TCD6 241 aa15.61■□□□□ 0.09
SMPD4-215ENST00000457039 STAMQ92783 540 aa15.61■□□□□ 0.09
SMPD4-215ENST00000457039 KCNN1Q92952 543 aa15.61■□□□□ 0.09
SMPD4-215ENST00000457039 FIZ1Q96SL8 496 aa15.61■□□□□ 0.09
SMPD4-215ENST00000457039 SLC9A7Q96T83 725 aa15.61■□□□□ 0.09
SMPD4-215ENST00000457039 FZD8Q9H461 694 aa15.61■□□□□ 0.09
SMPD4-215ENST00000457039 RGS18Q9NS28 235 aa15.61■□□□□ 0.09
SMPD4-215ENST00000457039 AGPAT5Q9NUQ2 364 aa15.61■□□□□ 0.09
SMPD4-215ENST00000457039 SERTAD1Q9UHV2 236 aa15.61■□□□□ 0.09
SMPD4-215ENST00000457039 SLC4A7Q9Y6M7 1214 aa15.61■□□□□ 0.09
SMPD4-215ENST00000457039 INO80B-WBP1J3KQ70 363 aa15.6■□□□□ 0.09
SMPD4-215ENST00000457039 TSPAN1O60635 241 aa15.6■□□□□ 0.09
SMPD4-215ENST00000457039 KRT18P05783 430 aaKnown RBP15.6■□□□□ 0.09
SMPD4-215ENST00000457039 HOXA11P31270 313 aaPredicted RBP15.6■□□□□ 0.09
SMPD4-215ENST00000457039 KCNJ6P48051 423 aa15.6■□□□□ 0.09
SMPD4-215ENST00000457039 FAM187BQ17R55 369 aa15.6■□□□□ 0.09
SMPD4-215ENST00000457039 LONRF3Q496Y0 759 aa15.6■□□□□ 0.09
SMPD4-215ENST00000457039 DYMQ7RTS9 669 aa15.6■□□□□ 0.09
SMPD4-215ENST00000457039 ZBTB8OSQ8IWT0 167 aa15.6■□□□□ 0.09
SMPD4-215ENST00000457039 ENGASEQ8NFI3 743 aa15.6■□□□□ 0.09
SMPD4-215ENST00000457039 DEPTORQ8TB45 409 aa15.6■□□□□ 0.09
SMPD4-215ENST00000457039 ADAM2Q99965 735 aa15.6■□□□□ 0.09
SMPD4-215ENST00000457039 C7orf25Q9BPX7 421 aa15.6■□□□□ 0.09
SMPD4-215ENST00000457039 TRIM9Q9C026 710 aa15.6■□□□□ 0.09
SMPD4-215ENST00000457039 PARVGQ9HBI0 331 aa15.6■□□□□ 0.09
SMPD4-215ENST00000457039 KMT5AQ9NQR1 393 aa15.6■□□□□ 0.09
SMPD4-215ENST00000457039 CHST12Q9NRB3 414 aa15.6■□□□□ 0.09
SMPD4-215ENST00000457039 LARSQ9P2J5 1176 aaKnown RBP15.6■□□□□ 0.09
SMPD4-215ENST00000457039 USP25Q9UHP3 1055 aa15.6■□□□□ 0.09
SMPD4-215ENST00000457039 KCNG1Q9UIX4 513 aa15.6■□□□□ 0.09
SMPD4-215ENST00000457039 TRIOBPQ9H2D6 2365 aa15.6■□□□□ 0.09
SMPD4-215ENST00000457039 CCDC169A6NNP5 214 aa15.59■□□□□ 0.09
SMPD4-215ENST00000457039 C9IYK1 514 aa15.59■□□□□ 0.09
SMPD4-215ENST00000457039 GADD45BO75293 160 aaPredicted RBP15.59■□□□□ 0.09
SMPD4-215ENST00000457039 TBCAO75347 108 aaKnown RBP15.59■□□□□ 0.09
SMPD4-215ENST00000457039 FAM13AO94988 1023 aa15.59■□□□□ 0.09
SMPD4-215ENST00000457039 AMHP03971 560 aa15.59■□□□□ 0.09
SMPD4-215ENST00000457039 EDN1P05305 212 aa15.59■□□□□ 0.09
SMPD4-215ENST00000457039 ATP2A2P16615 1042 aaKnown RBP15.59■□□□□ 0.09
SMPD4-215ENST00000457039 EFNA5P52803 228 aa15.59■□□□□ 0.09
SMPD4-215ENST00000457039 NCKAP1LP55160 1127 aa15.59■□□□□ 0.09
SMPD4-215ENST00000457039 FAM189BP81408 668 aa15.59■□□□□ 0.09
SMPD4-215ENST00000457039 TAS1R3Q7RTX0 852 aa15.59■□□□□ 0.09
SMPD4-215ENST00000457039 FMR1NBQ8N0W7 255 aaPredicted RBP15.59■□□□□ 0.09
SMPD4-215ENST00000457039 TMEM161BQ8NDZ6 487 aa15.59■□□□□ 0.09
SMPD4-215ENST00000457039 TOP1MTQ969P6 601 aa15.59■□□□□ 0.09
SMPD4-215ENST00000457039 PAGE5Q96GU1 130 aa15.59■□□□□ 0.09
SMPD4-215ENST00000457039 PRIMPOLQ96LW4 560 aa15.59■□□□□ 0.09
SMPD4-215ENST00000457039 TRAIPQ9BWF2 469 aa15.59■□□□□ 0.09
SMPD4-215ENST00000457039 LRRC27Q9C0I9 530 aa15.59■□□□□ 0.09
SMPD4-215ENST00000457039 TMEM134Q9H6X4 195 aa15.59■□□□□ 0.09
SMPD4-215ENST00000457039 C1orf112Q9NSG2 853 aa15.59■□□□□ 0.09
SMPD4-215ENST00000457039 PRMT7Q9NVM4 692 aaPredicted RBP15.59■□□□□ 0.09
SMPD4-215ENST00000457039 HSFX4A0A1B0GTS1 333 aaPredicted RBP15.58■□□□□ 0.08
SMPD4-215ENST00000457039 HSFX3A0A1B0GWH4 333 aaPredicted RBP15.58■□□□□ 0.08
SMPD4-215ENST00000457039 DENND3A2RUS2 1198 aa15.58■□□□□ 0.08
SMPD4-215ENST00000457039 GOLGA6L4A6NEF3 574 aa15.58■□□□□ 0.08
SMPD4-215ENST00000457039 TTLL13PA6NNM8 815 aa15.58■□□□□ 0.08
SMPD4-215ENST00000457039 GRXCR1A8MXD5 290 aa15.58■□□□□ 0.08
SMPD4-215ENST00000457039 ACKR2O00590 384 aa15.58■□□□□ 0.08
SMPD4-215ENST00000457039 SLC16A4O15374 487 aa15.58■□□□□ 0.08
SMPD4-215ENST00000457039 B4GALT5O43286 388 aa15.58■□□□□ 0.08
SMPD4-215ENST00000457039 ERLIN2O94905 339 aa15.58■□□□□ 0.08
SMPD4-215ENST00000457039 ZNF202O95125 648 aa15.58■□□□□ 0.08
SMPD4-215ENST00000457039 MAPTP10636 758 aaKnown RBP15.58■□□□□ 0.08
SMPD4-215ENST00000457039 ZSCAN20P17040 1043 aaPredicted RBP15.58■□□□□ 0.08
SMPD4-215ENST00000457039 ARF4P18085 180 aaPredicted RBP15.58■□□□□ 0.08
SMPD4-215ENST00000457039 AXLP30530 894 aa15.58■□□□□ 0.08
SMPD4-215ENST00000457039 SARSP49591 514 aaKnown RBP15.58■□□□□ 0.08
SMPD4-215ENST00000457039 AMPD3Q01432 767 aa15.58■□□□□ 0.08
SMPD4-215ENST00000457039 SNW1Q13573 536 aaKnown RBP15.58■□□□□ 0.08
SMPD4-215ENST00000457039 MAPK6Q16659 721 aa15.58■□□□□ 0.08
SMPD4-215ENST00000457039 TPRNQ4KMQ1 711 aa15.58■□□□□ 0.08
SMPD4-215ENST00000457039 HABP4Q5JVS0 413 aaKnown RBP15.58■□□□□ 0.08
SMPD4-215ENST00000457039 SLC24A5Q71RS6 500 aa15.58■□□□□ 0.08
SMPD4-215ENST00000457039 TMCO2Q7Z6W1 182 aaPredicted RBP15.58■□□□□ 0.08
SMPD4-215ENST00000457039 HERC6Q8IVU3 1022 aa15.58■□□□□ 0.08
SMPD4-215ENST00000457039 CEP57L1Q8IYX8 460 aa15.58■□□□□ 0.08
SMPD4-215ENST00000457039 MYOCDQ8IZQ8 938 aa15.58■□□□□ 0.08
SMPD4-215ENST00000457039 MYCT1Q8N699 235 aa15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms