RNA–Protein interactions for RNA: ENST00000456581.1

LINC00959-201, Transcript of HCG1648656, isoform CRA_a, humanhuman

TSL 2

Gene LINC00959, Length 2,843 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00959-201ENST00000456581 TNFRSF8P28908 595 aa13.48□□□□□ -0.25
LINC00959-201ENST00000456581 BACE1P56817 501 aa13.48□□□□□ -0.25
LINC00959-201ENST00000456581 AADACL2Q6P093 401 aa13.48□□□□□ -0.25
LINC00959-201ENST00000456581 ALKBH5Q6P6C2 394 aaKnown RBP13.48□□□□□ -0.25
LINC00959-201ENST00000456581 KDM7AQ6ZMT4 941 aa13.48□□□□□ -0.25
LINC00959-201ENST00000456581 MYCBPAPQ8TBZ2 947 aa13.48□□□□□ -0.25
LINC00959-201ENST00000456581 CNKSR2Q8WXI2 1034 aa13.48□□□□□ -0.25
LINC00959-201ENST00000456581 TAF4BQ92750 862 aa13.48□□□□□ -0.25
LINC00959-201ENST00000456581 TEKT3Q9BXF9 490 aa13.48□□□□□ -0.25
LINC00959-201ENST00000456581 NAGPAQ9UK23 515 aa13.48□□□□□ -0.25
LINC00959-201ENST00000456581 MYH11P35749 1972 aa13.47□□□□□ -0.25
LINC00959-201ENST00000456581 PPP1R37O75864 691 aa13.47□□□□□ -0.25
LINC00959-201ENST00000456581 ECM2O94769 699 aaPredicted RBP13.47□□□□□ -0.25
LINC00959-201ENST00000456581 GFPT2O94808 682 aa13.47□□□□□ -0.25
LINC00959-201ENST00000456581 ABCB4P21439 1286 aa13.47□□□□□ -0.25
LINC00959-201ENST00000456581 BAATQ14032 418 aaPredicted RBP13.47□□□□□ -0.25
LINC00959-201ENST00000456581 B3GNT9Q6UX72 402 aa13.47□□□□□ -0.25
LINC00959-201ENST00000456581 NLRP14Q86W24 1093 aa13.47□□□□□ -0.25
LINC00959-201ENST00000456581 RMDN3Q96TC7 470 aa13.47□□□□□ -0.25
LINC00959-201ENST00000456581 FBXL5Q9UKA1 691 aa13.47□□□□□ -0.25
LINC00959-201ENST00000456581 CTDP1Q9Y5B0 961 aaPredicted RBP13.47□□□□□ -0.25
LINC00959-201ENST00000456581 TISP43B9A030 160 aa13.47□□□□□ -0.25
LINC00959-201ENST00000456581 CETN3O15182 167 aa13.47□□□□□ -0.25
LINC00959-201ENST00000456581 TGFB1I1O43294 461 aa13.47□□□□□ -0.25
LINC00959-201ENST00000456581 CTNNA1P35221 906 aaKnown RBP13.47□□□□□ -0.25
LINC00959-201ENST00000456581 ZNF844Q08AG5 666 aa13.47□□□□□ -0.25
LINC00959-201ENST00000456581 UGCGQ16739 394 aa13.47□□□□□ -0.25
LINC00959-201ENST00000456581 SCYL3Q8IZE3 742 aa13.47□□□□□ -0.25
LINC00959-201ENST00000456581 OTUD6BQ8N6M0 293 aa13.47□□□□□ -0.25
LINC00959-201ENST00000456581 LRRC57Q8N9N7 239 aa13.47□□□□□ -0.25
LINC00959-201ENST00000456581 IQCDQ96DY2 449 aa13.47□□□□□ -0.25
LINC00959-201ENST00000456581 EPN3Q9H201 632 aa13.47□□□□□ -0.25
LINC00959-201ENST00000456581 TAF1DQ9H5J8 278 aaPredicted RBP13.47□□□□□ -0.25
LINC00959-201ENST00000456581 TUFT1Q9NNX1 390 aa13.47□□□□□ -0.25
LINC00959-201ENST00000456581 AIPL1Q9NZN9 384 aa13.47□□□□□ -0.25
LINC00959-201ENST00000456581 IGSF9BQ9UPX0 1349 aa13.47□□□□□ -0.25
LINC00959-201ENST00000456581 RPTORQ8N122 1335 aa13.46□□□□□ -0.25
LINC00959-201ENST00000456581 TESPA1A2RU30 521 aaPredicted RBP13.46□□□□□ -0.25
LINC00959-201ENST00000456581 DNM1LO00429 736 aa13.46□□□□□ -0.25
LINC00959-201ENST00000456581 LRRN2O75325 713 aa13.46□□□□□ -0.25
LINC00959-201ENST00000456581 MDH1P40925 334 aaKnown RBP13.46□□□□□ -0.25
LINC00959-201ENST00000456581 ZNF211Q13398 564 aaPredicted RBP13.46□□□□□ -0.25
LINC00959-201ENST00000456581 PRPF4BQ13523 1007 aaKnown RBP13.46□□□□□ -0.25
LINC00959-201ENST00000456581 LLGL1Q15334 1064 aa13.46□□□□□ -0.25
LINC00959-201ENST00000456581 GLE1Q53GS7 698 aaKnown RBP13.46□□□□□ -0.25
LINC00959-201ENST00000456581 MIER3Q7Z3K6 550 aa13.46□□□□□ -0.25
LINC00959-201ENST00000456581 DAAM2Q86T65 1068 aa13.46□□□□□ -0.25
LINC00959-201ENST00000456581 PALB2Q86YC2 1186 aa13.46□□□□□ -0.25
LINC00959-201ENST00000456581 ZNF280CQ8ND82 737 aa13.46□□□□□ -0.25
LINC00959-201ENST00000456581 U2AF1L4Q8WU68 220 aaKnown RBP13.46□□□□□ -0.25
LINC00959-201ENST00000456581 CEP63Q96MT8 703 aa13.46□□□□□ -0.25
LINC00959-201ENST00000456581 FIZ1Q96SL8 496 aa13.46□□□□□ -0.25
LINC00959-201ENST00000456581 EHMT1Q9H9B1 1298 aa13.46□□□□□ -0.25
LINC00959-201ENST00000456581 SPON1Q9HCB6 807 aa13.46□□□□□ -0.25
LINC00959-201ENST00000456581 PICK1Q9NRD5 415 aa13.46□□□□□ -0.25
LINC00959-201ENST00000456581 H0YHG0 523 aa13.46□□□□□ -0.25
LINC00959-201ENST00000456581 KRIT1O00522 736 aa13.46□□□□□ -0.25
LINC00959-201ENST00000456581 MEFVO15553 781 aaPredicted RBP13.46□□□□□ -0.25
LINC00959-201ENST00000456581 DDNO94850 711 aaPredicted RBP13.46□□□□□ -0.25
LINC00959-201ENST00000456581 NR3C1P04150 777 aa13.46□□□□□ -0.25
LINC00959-201ENST00000456581 SP4Q02446 784 aa13.46□□□□□ -0.25
LINC00959-201ENST00000456581 MTMR1Q13613 665 aa13.46□□□□□ -0.25
LINC00959-201ENST00000456581 PGM5Q15124 567 aa13.46□□□□□ -0.25
LINC00959-201ENST00000456581 EXOC3L4Q17RC7 722 aa13.46□□□□□ -0.25
LINC00959-201ENST00000456581 DAW1Q8N136 415 aa13.46□□□□□ -0.25
LINC00959-201ENST00000456581 UHMK1Q8TAS1 419 aaKnown RBP13.46□□□□□ -0.25
LINC00959-201ENST00000456581 RNF146Q9NTX7 359 aa13.46□□□□□ -0.25
LINC00959-201ENST00000456581 GPRC5DQ9NZD1 345 aa13.46□□□□□ -0.25
LINC00959-201ENST00000456581 ARMCX3Q9UH62 379 aaPredicted RBP13.46□□□□□ -0.25
LINC00959-201ENST00000456581 TSKSQ9UJT2 592 aa13.46□□□□□ -0.25
LINC00959-201ENST00000456581 TMEM59LQ9UK28 342 aa13.46□□□□□ -0.25
LINC00959-201ENST00000456581 COL11A1P12107 1806 aaPredicted RBP13.46□□□□□ -0.26
LINC00959-201ENST00000456581 ZMYM2Q9UBW7 1377 aa13.45□□□□□ -0.26
LINC00959-201ENST00000456581 H0YGN5 161 aa13.45□□□□□ -0.26
LINC00959-201ENST00000456581 DDX3XO00571 662 aaKnown RBP eCLIP13.45□□□□□ -0.26
LINC00959-201ENST00000456581 EPHA7Q15375 998 aa13.45□□□□□ -0.26
LINC00959-201ENST00000456581 ODR4Q5SWX8 454 aa13.45□□□□□ -0.26
LINC00959-201ENST00000456581 SNRNP48Q6IEG0 339 aaKnown RBP13.45□□□□□ -0.26
LINC00959-201ENST00000456581 RNF207Q6ZRF8 634 aa13.45□□□□□ -0.26
LINC00959-201ENST00000456581 KIRREL3Q8IZU9 778 aa13.45□□□□□ -0.26
LINC00959-201ENST00000456581 AGO4Q9HCK5 861 aaKnown RBP13.45□□□□□ -0.26
LINC00959-201ENST00000456581 GCNT4Q9P109 453 aa13.45□□□□□ -0.26
LINC00959-201ENST00000456581 NFS1Q9Y697 457 aa13.45□□□□□ -0.26
LINC00959-201ENST00000456581 SMIM23A6NLE4 172 aa13.45□□□□□ -0.26
LINC00959-201ENST00000456581 SLC26A4O43511 780 aa13.45□□□□□ -0.26
LINC00959-201ENST00000456581 ZBTB48P10074 688 aaPredicted RBP13.45□□□□□ -0.26
LINC00959-201ENST00000456581 TNNC1P63316 161 aa13.45□□□□□ -0.26
LINC00959-201ENST00000456581 SETQ01105 290 aaPredicted RBP13.45□□□□□ -0.26
LINC00959-201ENST00000456581 ODF2Q5BJF6 829 aa13.45□□□□□ -0.26
LINC00959-201ENST00000456581 PEX26Q7Z412 305 aa13.45□□□□□ -0.26
LINC00959-201ENST00000456581 GLYCTKQ8IVS8 523 aa13.45□□□□□ -0.26
LINC00959-201ENST00000456581 TPCN2Q8NHX9 752 aa13.45□□□□□ -0.26
LINC00959-201ENST00000456581 SYN2Q92777 582 aaPredicted RBP13.45□□□□□ -0.26
LINC00959-201ENST00000456581 NACC1Q96RE7 527 aa13.45□□□□□ -0.26
LINC00959-201ENST00000456581 PDCD2LQ9BRP1 358 aa13.45□□□□□ -0.26
LINC00959-201ENST00000456581 PARVGQ9HBI0 331 aa13.45□□□□□ -0.26
LINC00959-201ENST00000456581 TMBIM4Q9HC24 238 aa13.45□□□□□ -0.26
LINC00959-201ENST00000456581 SIX2Q9NPC8 291 aa13.45□□□□□ -0.26
LINC00959-201ENST00000456581 GPRC5CQ9NQ84 441 aa13.45□□□□□ -0.26
LINC00959-201ENST00000456581 TAS2R14Q9NYV8 317 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 108.7 ms