RNA–Protein interactions for RNA: ENST00000456173.6

NEDD4L-208, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4L, Length 4,978 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-208ENST00000456173 PP2D1A8MPX8 630 aa13.13□□□□□ -0.31
NEDD4L-208ENST00000456173 E2F6O75461 281 aa13.13□□□□□ -0.31
NEDD4L-208ENST00000456173 KRT38O76015 456 aa13.13□□□□□ -0.31
NEDD4L-208ENST00000456173 CDC27P30260 824 aa13.13□□□□□ -0.31
NEDD4L-208ENST00000456173 FAM102BQ5T8I3 360 aa13.13□□□□□ -0.31
NEDD4L-208ENST00000456173 ARL6IP4Q66PJ3 421 aaKnown RBP13.13□□□□□ -0.31
NEDD4L-208ENST00000456173 RINLQ6ZS11 566 aa13.13□□□□□ -0.31
NEDD4L-208ENST00000456173 OMA1Q96E52 524 aa13.13□□□□□ -0.31
NEDD4L-208ENST00000456173 DTNAQ9Y4J8 743 aa13.13□□□□□ -0.31
NEDD4L-208ENST00000456173 ARIH1Q9Y4X5 557 aaPredicted RBP13.13□□□□□ -0.31
NEDD4L-208ENST00000456173 STRNO43815 780 aa13.13□□□□□ -0.31
NEDD4L-208ENST00000456173 SERPINB10P48595 397 aa13.13□□□□□ -0.31
NEDD4L-208ENST00000456173 UBE3CQ15386 1083 aa13.13□□□□□ -0.31
NEDD4L-208ENST00000456173 ANKRD40Q6AI12 368 aa13.13□□□□□ -0.31
NEDD4L-208ENST00000456173 ANKMY2Q8IV38 441 aa13.13□□□□□ -0.31
NEDD4L-208ENST00000456173 EZH1Q92800 747 aaPredicted RBP13.13□□□□□ -0.31
NEDD4L-208ENST00000456173 RNF25Q96BH1 459 aaPredicted RBP13.13□□□□□ -0.31
NEDD4L-208ENST00000456173 BRD8Q9H0E9 1235 aa13.13□□□□□ -0.31
NEDD4L-208ENST00000456173 TEKT2Q9UIF3 430 aa13.13□□□□□ -0.31
NEDD4L-208ENST00000456173 CCPG1Q9ULG6 757 aa13.13□□□□□ -0.31
NEDD4L-208ENST00000456173 CORO1CQ9ULV4 474 aaPredicted RBP13.13□□□□□ -0.31
NEDD4L-208ENST00000456173 SMG5Q9UPR3 1016 aaKnown RBP13.13□□□□□ -0.31
NEDD4L-208ENST00000456173 PCDHB4Q9Y5E5 795 aa13.13□□□□□ -0.31
NEDD4L-208ENST00000456173 LOC100653049A0A140TA62 436 aa13.13□□□□□ -0.31
NEDD4L-208ENST00000456173 KRT34O76011 436 aa13.13□□□□□ -0.31
NEDD4L-208ENST00000456173 GPC5P78333 572 aa13.13□□□□□ -0.31
NEDD4L-208ENST00000456173 MORF4L2Q15014 288 aa13.13□□□□□ -0.31
NEDD4L-208ENST00000456173 CCDC85BQ15834 202 aaPredicted RBP13.13□□□□□ -0.31
NEDD4L-208ENST00000456173 ACCSLQ4AC99 568 aa13.13□□□□□ -0.31
NEDD4L-208ENST00000456173 ZNF804AQ7Z570 1209 aa13.13□□□□□ -0.31
NEDD4L-208ENST00000456173 ERICH1Q86X53 443 aa13.13□□□□□ -0.31
NEDD4L-208ENST00000456173 TGFBRAP1Q8WUH2 860 aa13.13□□□□□ -0.31
NEDD4L-208ENST00000456173 TRIM11Q96F44 468 aa13.13□□□□□ -0.31
NEDD4L-208ENST00000456173 PPP1R36Q96LQ0 422 aa13.13□□□□□ -0.31
NEDD4L-208ENST00000456173 APOL6Q9BWW8 343 aa13.13□□□□□ -0.31
NEDD4L-208ENST00000456173 GLI1P08151 1106 aa13.12□□□□□ -0.31
NEDD4L-208ENST00000456173 SRGNP10124 158 aa13.12□□□□□ -0.31
NEDD4L-208ENST00000456173 FCER1AP12319 257 aa13.12□□□□□ -0.31
NEDD4L-208ENST00000456173 PIK3CAP42336 1068 aa13.12□□□□□ -0.31
NEDD4L-208ENST00000456173 SMAD1Q15797 465 aaKnown RBP13.12□□□□□ -0.31
NEDD4L-208ENST00000456173 CLEC4GQ6UXB4 293 aa13.12□□□□□ -0.31
NEDD4L-208ENST00000456173 ACAD11Q709F0 780 aa13.12□□□□□ -0.31
NEDD4L-208ENST00000456173 USP49Q70CQ1 688 aa13.12□□□□□ -0.31
NEDD4L-208ENST00000456173 JAMLQ86YT9 394 aa13.12□□□□□ -0.31
NEDD4L-208ENST00000456173 ZCRB1Q8TBF4 217 aaKnown RBP13.12□□□□□ -0.31
NEDD4L-208ENST00000456173 SCG3Q8WXD2 468 aaKnown RBP13.12□□□□□ -0.31
NEDD4L-208ENST00000456173 ZNF496Q96IT1 587 aaPredicted RBP13.12□□□□□ -0.31
NEDD4L-208ENST00000456173 ZFYVE19Q96K21 471 aa13.12□□□□□ -0.31
NEDD4L-208ENST00000456173 ANKRD27Q96NW4 1050 aa13.12□□□□□ -0.31
NEDD4L-208ENST00000456173 SHCBP1LQ9BZQ2 653 aa13.12□□□□□ -0.31
NEDD4L-208ENST00000456173 VPS11Q9H270 941 aa13.12□□□□□ -0.31
NEDD4L-208ENST00000456173 PRPF3O43395 683 aaKnown RBP13.12□□□□□ -0.31
NEDD4L-208ENST00000456173 PLEKHA8P1O95397 391 aa13.12□□□□□ -0.31
NEDD4L-208ENST00000456173 TCN1P20061 433 aaPredicted RBP13.12□□□□□ -0.31
NEDD4L-208ENST00000456173 ICA1Q05084 483 aa13.12□□□□□ -0.31
NEDD4L-208ENST00000456173 KIF19Q2TAC6 998 aa13.12□□□□□ -0.31
NEDD4L-208ENST00000456173 LRRC8EQ6NSJ5 796 aa13.12□□□□□ -0.31
NEDD4L-208ENST00000456173 ISLR2Q6UXK2 745 aa13.12□□□□□ -0.31
NEDD4L-208ENST00000456173 RBM43Q6ZSC3 357 aaKnown RBP13.12□□□□□ -0.31
NEDD4L-208ENST00000456173 TMEM237Q96Q45 408 aa13.12□□□□□ -0.31
NEDD4L-208ENST00000456173 TFCP2L1Q9NZI6 479 aa13.12□□□□□ -0.31
NEDD4L-208ENST00000456173 SUCLA2Q9P2R7 463 aaPredicted RBP13.12□□□□□ -0.31
NEDD4L-208ENST00000456173 CNOT8Q9UFF9 292 aaKnown RBP13.12□□□□□ -0.31
NEDD4L-208ENST00000456173 PHTF1Q9UMS5 762 aa13.12□□□□□ -0.31
NEDD4L-208ENST00000456173 CFAP43Q8NDM7 1665 aa13.12□□□□□ -0.31
NEDD4L-208ENST00000456173 ZSCAN5CA6NGD5 496 aaPredicted RBP13.12□□□□□ -0.31
NEDD4L-208ENST00000456173 LIFRP42702 1097 aa13.12□□□□□ -0.31
NEDD4L-208ENST00000456173 SF3B3Q15393 1217 aaKnown RBP13.12□□□□□ -0.31
NEDD4L-208ENST00000456173 PLEKHA7Q6IQ23 1121 aa13.12□□□□□ -0.31
NEDD4L-208ENST00000456173 IRGCQ6NXR0 463 aa13.12□□□□□ -0.31
NEDD4L-208ENST00000456173 CYGBQ8WWM9 190 aa13.12□□□□□ -0.31
NEDD4L-208ENST00000456173 PAIP1Q9H074 479 aaKnown RBP13.12□□□□□ -0.31
NEDD4L-208ENST00000456173 CAPN6Q9Y6Q1 641 aa13.12□□□□□ -0.31
NEDD4L-208ENST00000456173 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.12□□□□□ -0.31
NEDD4L-208ENST00000456173 DUOX2Q9NRD8 1548 aa13.12□□□□□ -0.31
NEDD4L-208ENST00000456173 HNRNPCL2B2RXH8 293 aa13.12□□□□□ -0.31
NEDD4L-208ENST00000456173 TRIM16O95361 564 aa13.12□□□□□ -0.31
NEDD4L-208ENST00000456173 POLR2BP30876 1174 aaKnown RBP13.12□□□□□ -0.31
NEDD4L-208ENST00000456173 PHKA1P46020 1223 aa13.12□□□□□ -0.31
NEDD4L-208ENST00000456173 ANO4Q32M45 955 aa13.12□□□□□ -0.31
NEDD4L-208ENST00000456173 PAPD7Q5XG87 772 aaKnown RBP13.12□□□□□ -0.31
NEDD4L-208ENST00000456173 NLRP9Q7RTR0 991 aa13.12□□□□□ -0.31
NEDD4L-208ENST00000456173 FAF2Q96CS3 445 aa13.12□□□□□ -0.31
NEDD4L-208ENST00000456173 LACRTQ9GZZ8 138 aa13.12□□□□□ -0.31
NEDD4L-208ENST00000456173 MRPL47Q9HD33 250 aaKnown RBP13.12□□□□□ -0.31
NEDD4L-208ENST00000456173 PKD2L2Q9NZM6 624 aa13.12□□□□□ -0.31
NEDD4L-208ENST00000456173 FBXO2Q9UK22 296 aaPredicted RBP13.12□□□□□ -0.31
NEDD4L-208ENST00000456173 LSM1O15116 133 aaKnown RBP13.11□□□□□ -0.31
NEDD4L-208ENST00000456173 PLEKP08567 350 aaPredicted RBP13.11□□□□□ -0.31
NEDD4L-208ENST00000456173 HIBADHP31937 336 aaKnown RBP13.11□□□□□ -0.31
NEDD4L-208ENST00000456173 BPIFB4P59827 614 aa13.11□□□□□ -0.31
NEDD4L-208ENST00000456173 KBTBD12Q3ZCT8 623 aa13.11□□□□□ -0.31
NEDD4L-208ENST00000456173 LVRNQ6Q4G3 990 aa13.11□□□□□ -0.31
NEDD4L-208ENST00000456173 PRPF39Q86UA1 669 aaKnown RBP13.11□□□□□ -0.31
NEDD4L-208ENST00000456173 RSPH3Q86UC2 560 aa13.11□□□□□ -0.31
NEDD4L-208ENST00000456173 DNAAF3Q8N9W5 541 aa13.11□□□□□ -0.31
NEDD4L-208ENST00000456173 GLG1Q92896 1179 aa13.11□□□□□ -0.31
NEDD4L-208ENST00000456173 HEY2Q9UBP5 337 aa13.11□□□□□ -0.31
NEDD4L-208ENST00000456173 H0Y626 953 aa13.11□□□□□ -0.31
NEDD4L-208ENST00000456173 WBP4O75554 376 aaKnown RBP13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms