RNA–Protein interactions for RNA: ENST00000456150.5

CSPG5-203, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

TSL 1 (best) BASIC

Gene CSPG5, Length 2,089 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-203ENST00000456150 SRLQ86TD4 932 aa21.77■■□□□ 1.08
CSPG5-203ENST00000456150 SLC35G2Q8TBE7 412 aa21.77■■□□□ 1.08
CSPG5-203ENST00000456150 CLEC4DQ8WXI8 215 aa21.77■■□□□ 1.08
CSPG5-203ENST00000456150 TIPINQ9BVW5 301 aa21.77■■□□□ 1.08
CSPG5-203ENST00000456150 AGO4Q9HCK5 861 aaKnown RBP21.77■■□□□ 1.08
CSPG5-203ENST00000456150 MAP3K20Q9NYL2 800 aaKnown RBP21.77■■□□□ 1.08
CSPG5-203ENST00000456150 PKD2L1Q9P0L9 805 aa21.77■■□□□ 1.08
CSPG5-203ENST00000456150 COL20A1Q9P218 1284 aa21.77■■□□□ 1.08
CSPG5-203ENST00000456150 UBIAD1Q9Y5Z9 338 aa21.77■■□□□ 1.08
CSPG5-203ENST00000456150 ZHX2Q9Y6X8 837 aa21.77■■□□□ 1.08
CSPG5-203ENST00000456150 NFIBO00712 420 aa21.76■■□□□ 1.07
CSPG5-203ENST00000456150 DHX15O43143 795 aaKnown RBP21.76■■□□□ 1.07
CSPG5-203ENST00000456150 LYPLA2O95372 231 aa21.76■■□□□ 1.07
CSPG5-203ENST00000456150 PLS3P13797 630 aa21.76■■□□□ 1.07
CSPG5-203ENST00000456150 HSPA9P38646 679 aaKnown RBP21.76■■□□□ 1.07
CSPG5-203ENST00000456150 QARSP47897 775 aaKnown RBP21.76■■□□□ 1.07
CSPG5-203ENST00000456150 PLS1Q14651 629 aa21.76■■□□□ 1.07
CSPG5-203ENST00000456150 ARHGAP44Q17R89 818 aa21.76■■□□□ 1.07
CSPG5-203ENST00000456150 SAMD3Q8N6K7 520 aa21.76■■□□□ 1.07
CSPG5-203ENST00000456150 RDH13Q8NBN7 331 aa21.76■■□□□ 1.07
CSPG5-203ENST00000456150 LPAR1Q92633 364 aa21.76■■□□□ 1.07
CSPG5-203ENST00000456150 ARL8AQ96BM9 186 aa21.76■■□□□ 1.07
CSPG5-203ENST00000456150 TTC7AQ9ULT0 858 aaPredicted RBP21.76■■□□□ 1.07
CSPG5-203ENST00000456150 SAMM50Q9Y512 469 aa21.76■■□□□ 1.07
CSPG5-203ENST00000456150 SART1O43290 800 aaKnown RBP21.76■■□□□ 1.07
CSPG5-203ENST00000456150 RARRES1P49788 294 aa21.76■■□□□ 1.07
CSPG5-203ENST00000456150 SNRPFP62306 86 aaKnown RBP21.76■■□□□ 1.07
CSPG5-203ENST00000456150 ERVK-9P63128 1117 aa21.76■■□□□ 1.07
CSPG5-203ENST00000456150 SKOR1P84550 965 aa21.76■■□□□ 1.07
CSPG5-203ENST00000456150 HLTFQ14527 1009 aaKnown RBP eCLIP21.76■■□□□ 1.07
CSPG5-203ENST00000456150 PTPROQ16827 1216 aa21.76■■□□□ 1.07
CSPG5-203ENST00000456150 CCDC26Q8TAB7 109 aa21.76■■□□□ 1.07
CSPG5-203ENST00000456150 LMO3Q8TAP4 145 aa21.76■■□□□ 1.07
CSPG5-203ENST00000456150 AP1M1Q9BXS5 423 aa21.76■■□□□ 1.07
CSPG5-203ENST00000456150 TBC1D22BQ9NU19 505 aa21.76■■□□□ 1.07
CSPG5-203ENST00000456150 PGAP2Q9UHJ9 254 aa21.76■■□□□ 1.07
CSPG5-203ENST00000456150 RRP15Q9Y3B9 282 aaKnown RBP21.76■■□□□ 1.07
CSPG5-203ENST00000456150 EMSYQ7Z589 1322 aa21.75■■□□□ 1.07
CSPG5-203ENST00000456150 ANKRD62A6NC57 917 aa21.75■■□□□ 1.07
CSPG5-203ENST00000456150 BHMG1C9JSJ3 638 aaPredicted RBP21.75■■□□□ 1.07
CSPG5-203ENST00000456150 BUB1BO60566 1050 aaPredicted RBP21.75■■□□□ 1.07
CSPG5-203ENST00000456150 IRAK1P51617 712 aa21.75■■□□□ 1.07
CSPG5-203ENST00000456150 VAMP7P51809 220 aa21.75■■□□□ 1.07
CSPG5-203ENST00000456150 PPATQ06203 517 aa21.75■■□□□ 1.07
CSPG5-203ENST00000456150 PHLDB3Q6NSJ2 640 aa21.75■■□□□ 1.07
CSPG5-203ENST00000456150 MAEAQ7L5Y9 396 aa21.75■■□□□ 1.07
CSPG5-203ENST00000456150 MAATS1Q7Z4T9 603 aa21.75■■□□□ 1.07
CSPG5-203ENST00000456150 MICALL2Q8IY33 904 aa21.75■■□□□ 1.07
CSPG5-203ENST00000456150 C1orf131Q8NDD1 294 aaKnown RBP21.75■■□□□ 1.07
CSPG5-203ENST00000456150 IL31RAQ8NI17 732 aa21.75■■□□□ 1.07
CSPG5-203ENST00000456150 OSGEPQ9NPF4 335 aa21.75■■□□□ 1.07
CSPG5-203ENST00000456150 MAPK13O15264 365 aa21.75■■□□□ 1.07
CSPG5-203ENST00000456150 YBX3P16989 372 aaKnown RBP eCLIP21.75■■□□□ 1.07
CSPG5-203ENST00000456150 ZNF280AP59817 542 aaPredicted RBP21.75■■□□□ 1.07
CSPG5-203ENST00000456150 ITGB3BPQ13352 177 aaPredicted RBP21.75■■□□□ 1.07
CSPG5-203ENST00000456150 MTMR1Q13613 665 aa21.75■■□□□ 1.07
CSPG5-203ENST00000456150 SAMD7Q7Z3H4 446 aa21.75■■□□□ 1.07
CSPG5-203ENST00000456150 IWS1Q96ST2 819 aa21.75■■□□□ 1.07
CSPG5-203ENST00000456150 ST6GALNAC4Q9H4F1 302 aa21.75■■□□□ 1.07
CSPG5-203ENST00000456150 SEPT11Q9NVA2 429 aaKnown RBP21.75■■□□□ 1.07
CSPG5-203ENST00000456150 ABCB4P21439 1286 aa21.74■■□□□ 1.07
CSPG5-203ENST00000456150 CLUL1Q15846 466 aa21.74■■□□□ 1.07
CSPG5-203ENST00000456150 FOXR1Q6PIV2 292 aa21.74■■□□□ 1.07
CSPG5-203ENST00000456150 RHOT2Q8IXI1 618 aa21.74■■□□□ 1.07
CSPG5-203ENST00000456150 XXYLT1Q8NBI6 393 aa21.74■■□□□ 1.07
CSPG5-203ENST00000456150 SLC17A8Q8NDX2 589 aa21.74■■□□□ 1.07
CSPG5-203ENST00000456150 PIK3R5Q8WYR1 880 aa21.74■■□□□ 1.07
CSPG5-203ENST00000456150 LRRC45Q96CN5 670 aa21.74■■□□□ 1.07
CSPG5-203ENST00000456150 AGPAT1Q99943 283 aa21.74■■□□□ 1.07
CSPG5-203ENST00000456150 RSPH14Q9UHP6 348 aa21.74■■□□□ 1.07
CSPG5-203ENST00000456150 ZNF233A6NK53 670 aa21.73■■□□□ 1.07
CSPG5-203ENST00000456150 KRT14P02533 472 aa21.73■■□□□ 1.07
CSPG5-203ENST00000456150 ALAS1P13196 640 aa21.73■■□□□ 1.07
CSPG5-203ENST00000456150 RPS12P25398 132 aaKnown RBP21.73■■□□□ 1.07
CSPG5-203ENST00000456150 NAP1L3Q99457 506 aaPredicted RBP21.73■■□□□ 1.07
CSPG5-203ENST00000456150 DDX47Q9H0S4 455 aaKnown RBP21.73■■□□□ 1.07
CSPG5-203ENST00000456150 PCIF1Q9H4Z3 704 aa21.73■■□□□ 1.07
CSPG5-203ENST00000456150 CNOT7Q9UIV1 285 aaKnown RBP21.73■■□□□ 1.07
CSPG5-203ENST00000456150 ASTN2O75129 1339 aaPredicted RBP21.73■■□□□ 1.07
CSPG5-203ENST00000456150 FOXN3O00409 490 aaPredicted RBP21.73■■□□□ 1.07
CSPG5-203ENST00000456150 YWHABP31946 246 aaKnown RBP21.73■■□□□ 1.07
CSPG5-203ENST00000456150 GNGT1P63211 74 aa21.73■■□□□ 1.07
CSPG5-203ENST00000456150 GTF2BQ00403 316 aa21.73■■□□□ 1.07
CSPG5-203ENST00000456150 TRADDQ15628 312 aa21.73■■□□□ 1.07
CSPG5-203ENST00000456150 PPP2R5EQ16537 467 aa21.73■■□□□ 1.07
CSPG5-203ENST00000456150 LRIG3Q6UXM1 1119 aa21.73■■□□□ 1.07
CSPG5-203ENST00000456150 TRERF1Q96PN7 1200 aa21.73■■□□□ 1.07
CSPG5-203ENST00000456150 CARD9Q9H257 536 aa21.73■■□□□ 1.07
CSPG5-203ENST00000456150 UBE2TQ9NPD8 197 aaPredicted RBP21.73■■□□□ 1.07
CSPG5-203ENST00000456150 PNMA2Q9UL42 364 aa21.73■■□□□ 1.07
CSPG5-203ENST00000456150 IGSF9BQ9UPX0 1349 aa21.72■■□□□ 1.07
CSPG5-203ENST00000456150 MYO1CO00159 1063 aa21.72■■□□□ 1.07
CSPG5-203ENST00000456150 EIF3HO15372 352 aaKnown RBP eCLIP21.72■■□□□ 1.07
CSPG5-203ENST00000456150 LRRN2O75325 713 aa21.72■■□□□ 1.07
CSPG5-203ENST00000456150 ECHS1P30084 290 aa21.72■■□□□ 1.07
CSPG5-203ENST00000456150 HADHBP55084 474 aaKnown RBP21.72■■□□□ 1.07
CSPG5-203ENST00000456150 MRPS9P82933 396 aaKnown RBP21.72■■□□□ 1.07
CSPG5-203ENST00000456150 TBC1D10BQ4KMP7 808 aaPredicted RBP21.72■■□□□ 1.07
CSPG5-203ENST00000456150 EPC2Q52LR7 807 aa21.72■■□□□ 1.07
CSPG5-203ENST00000456150 CPXCR1Q8N123 301 aa21.72■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms