RNA–Protein interactions for RNA: ENST00000455240.1

PTPA-225, Transcript of protein phosphatase 2 phosphatase activator, humanhuman

TSL 3

Gene PTPA, Length 645 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPA-225ENST00000455240 ADAM7Q9H2U9 754 aa18.13■□□□□ 0.49
PTPA-225ENST00000455240 CYP26B1Q9NR63 512 aa18.13■□□□□ 0.49
PTPA-225ENST00000455240 FAM105AQ9NUU6 356 aa18.13■□□□□ 0.49
PTPA-225ENST00000455240 TBC1D13Q9NVG8 400 aa18.13■□□□□ 0.49
PTPA-225ENST00000455240 CDH22Q9UJ99 828 aa18.13■□□□□ 0.49
PTPA-225ENST00000455240 VAV3Q9UKW4 847 aa18.13■□□□□ 0.49
PTPA-225ENST00000455240 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP18.12■□□□□ 0.49
PTPA-225ENST00000455240 EML1O00423 815 aa18.12■□□□□ 0.49
PTPA-225ENST00000455240 ZNF623O75123 536 aa18.12■□□□□ 0.49
PTPA-225ENST00000455240 CXCL14O95715 111 aa18.12■□□□□ 0.49
PTPA-225ENST00000455240 QARSP47897 775 aaKnown RBP18.12■□□□□ 0.49
PTPA-225ENST00000455240 POLGP54098 1239 aaPredicted RBP18.12■□□□□ 0.49
PTPA-225ENST00000455240 LETM2Q2VYF4 491 aa18.12■□□□□ 0.49
PTPA-225ENST00000455240 LONRF3Q496Y0 759 aa18.12■□□□□ 0.49
PTPA-225ENST00000455240 NOMO2Q5JPE7 1267 aa18.12■□□□□ 0.49
PTPA-225ENST00000455240 KSR1Q8IVT5 923 aa18.12■□□□□ 0.49
PTPA-225ENST00000455240 SLC7A3Q8WY07 619 aa18.12■□□□□ 0.49
PTPA-225ENST00000455240 IGSF21Q96ID5 467 aa18.12■□□□□ 0.49
PTPA-225ENST00000455240 FAM20AQ96MK3 541 aa18.12■□□□□ 0.49
PTPA-225ENST00000455240 POMKQ9H5K3 350 aa18.12■□□□□ 0.49
PTPA-225ENST00000455240 KCNMB3Q9NPA1 279 aa18.12■□□□□ 0.49
PTPA-225ENST00000455240 TSHZ2Q9NRE2 1034 aa18.12■□□□□ 0.49
PTPA-225ENST00000455240 AGPAT5Q9NUQ2 364 aa18.12■□□□□ 0.49
PTPA-225ENST00000455240 DZANK1Q9NVP4 752 aa18.12■□□□□ 0.49
PTPA-225ENST00000455240 KCNJ14Q9UNX9 436 aa18.12■□□□□ 0.49
PTPA-225ENST00000455240 INPP5FQ9Y2H2 1132 aa18.12■□□□□ 0.49
PTPA-225ENST00000455240 IRAK3Q9Y616 596 aa18.12■□□□□ 0.49
PTPA-225ENST00000455240 MYO10Q9HD67 2058 aa18.11■□□□□ 0.49
PTPA-225ENST00000455240 CCDC194A0A1B0GVG4 234 aa18.11■□□□□ 0.49
PTPA-225ENST00000455240 MEIS3P2A8K0S8 358 aa18.11■□□□□ 0.49
PTPA-225ENST00000455240 DKC1O60832 514 aaKnown RBP eCLIP18.11■□□□□ 0.49
PTPA-225ENST00000455240 CDKL5O76039 1030 aa18.11■□□□□ 0.49
PTPA-225ENST00000455240 CTSAP10619 480 aa18.11■□□□□ 0.49
PTPA-225ENST00000455240 GCFC2P16383 781 aaKnown RBP18.11■□□□□ 0.49
PTPA-225ENST00000455240 MTHFRP42898 656 aa18.11■□□□□ 0.49
PTPA-225ENST00000455240 RNASELQ05823 741 aaKnown RBP18.11■□□□□ 0.49
PTPA-225ENST00000455240 GIT2Q14161 759 aa18.11■□□□□ 0.49
PTPA-225ENST00000455240 DDX53Q86TM3 631 aaKnown RBP18.11■□□□□ 0.49
PTPA-225ENST00000455240 TMEM87AQ8NBN3 555 aa18.11■□□□□ 0.49
PTPA-225ENST00000455240 PHF20Q9BVI0 1012 aa18.11■□□□□ 0.49
PTPA-225ENST00000455240 NRDE2Q9H7Z3 1164 aa18.11■□□□□ 0.49
PTPA-225ENST00000455240 IFT122Q9HBG6 1241 aa18.11■□□□□ 0.49
PTPA-225ENST00000455240 PPME1Q9Y570 386 aa18.11■□□□□ 0.49
PTPA-225ENST00000455240 COL4A3BPQ9Y5P4 624 aa18.11■□□□□ 0.49
PTPA-225ENST00000455240 OFD1O75665 1012 aa18.1■□□□□ 0.49
PTPA-225ENST00000455240 GALTP07902 379 aa18.1■□□□□ 0.49
PTPA-225ENST00000455240 NPEPPSP55786 919 aa18.1■□□□□ 0.49
PTPA-225ENST00000455240 RARS2Q5T160 578 aaKnown RBP18.1■□□□□ 0.49
PTPA-225ENST00000455240 PPP4R3AQ6IN85 833 aa18.1■□□□□ 0.49
PTPA-225ENST00000455240 NEK8Q86SG6 692 aa18.1■□□□□ 0.49
PTPA-225ENST00000455240 EXOC8Q8IYI6 725 aa18.1■□□□□ 0.49
PTPA-225ENST00000455240 BCL7CQ8WUZ0 217 aaPredicted RBP18.1■□□□□ 0.49
PTPA-225ENST00000455240 AUTS2Q8WXX7 1259 aa18.1■□□□□ 0.49
PTPA-225ENST00000455240 PGBD4Q96DM1 585 aa18.1■□□□□ 0.49
PTPA-225ENST00000455240 CEP170P1Q96L14 293 aa18.1■□□□□ 0.49
PTPA-225ENST00000455240 RIPOR3Q96MK2 946 aa18.1■□□□□ 0.49
PTPA-225ENST00000455240 SLKQ9H2G2 1235 aaPredicted RBP18.1■□□□□ 0.49
PTPA-225ENST00000455240 PDRG1Q9NUG6 133 aa18.1■□□□□ 0.49
PTPA-225ENST00000455240 PCDHB2Q9Y5E7 798 aa18.1■□□□□ 0.49
PTPA-225ENST00000455240 ARID2Q68CP9 1835 aa18.09■□□□□ 0.49
PTPA-225ENST00000455240 STK36Q9NRP7 1315 aa18.09■□□□□ 0.49
PTPA-225ENST00000455240 C2CD4DB7Z1M9 353 aa18.09■□□□□ 0.49
PTPA-225ENST00000455240 P4HBP07237 508 aaKnown RBP18.09■□□□□ 0.49
PTPA-225ENST00000455240 RFC5P40937 340 aa18.09■□□□□ 0.49
PTPA-225ENST00000455240 SLC11A1P49279 550 aa18.09■□□□□ 0.49
PTPA-225ENST00000455240 VCPP55072 806 aaKnown RBP18.09■□□□□ 0.49
PTPA-225ENST00000455240 TCF15Q12870 199 aa18.09■□□□□ 0.49
PTPA-225ENST00000455240 MTMR3Q13615 1198 aa18.09■□□□□ 0.49
PTPA-225ENST00000455240 KIAA1841Q6NSI8 718 aa18.09■□□□□ 0.49
PTPA-225ENST00000455240 KREMEN2Q8NCW0 462 aa18.09■□□□□ 0.49
PTPA-225ENST00000455240 URGCPQ8TCY9 931 aa18.09■□□□□ 0.49
PTPA-225ENST00000455240 PSPC1Q8WXF1 523 aaKnown RBP18.09■□□□□ 0.49
PTPA-225ENST00000455240 PHOX2BQ99453 314 aa18.09■□□□□ 0.49
PTPA-225ENST00000455240 GBP3Q9H0R5 595 aa18.09■□□□□ 0.49
PTPA-225ENST00000455240 DHX33Q9H6R0 707 aaKnown RBP18.09■□□□□ 0.49
PTPA-225ENST00000455240 WRAP73Q9P2S5 460 aaPredicted RBP18.09■□□□□ 0.49
PTPA-225ENST00000455240 DNAJB4Q9UDY4 337 aa18.09■□□□□ 0.49
PTPA-225ENST00000455240 SORCS3Q9UPU3 1222 aa18.09■□□□□ 0.49
PTPA-225ENST00000455240 DENND4AQ7Z401 1863 aa18.08■□□□□ 0.49
PTPA-225ENST00000455240 TBX3O15119 743 aa18.08■□□□□ 0.48
PTPA-225ENST00000455240 B4GALT3O60512 393 aa18.08■□□□□ 0.48
PTPA-225ENST00000455240 WEE2P0C1S8 567 aa18.08■□□□□ 0.48
PTPA-225ENST00000455240 EPCAMP16422 314 aa18.08■□□□□ 0.48
PTPA-225ENST00000455240 XBP1P17861 261 aa18.08■□□□□ 0.48
PTPA-225ENST00000455240 SCRN1Q12765 414 aa18.08■□□□□ 0.48
PTPA-225ENST00000455240 AGMOQ6ZNB7 445 aa18.08■□□□□ 0.48
PTPA-225ENST00000455240 SRGAP1Q7Z6B7 1085 aa18.08■□□□□ 0.48
PTPA-225ENST00000455240 UBALD2Q8IYN6 164 aa18.08■□□□□ 0.48
PTPA-225ENST00000455240 C12orf76Q8N812 135 aaPredicted RBP18.08■□□□□ 0.48
PTPA-225ENST00000455240 ZNF579Q8NAF0 562 aaKnown RBP18.08■□□□□ 0.48
PTPA-225ENST00000455240 TDRD5Q8NAT2 981 aaKnown RBP18.08■□□□□ 0.48
PTPA-225ENST00000455240 SLC22A17Q8WUG5 538 aa18.08■□□□□ 0.48
PTPA-225ENST00000455240 PRPF31Q8WWY3 499 aaKnown RBP18.08■□□□□ 0.48
PTPA-225ENST00000455240 TMEM143Q96AN5 459 aa18.08■□□□□ 0.48
PTPA-225ENST00000455240 NAP1L4Q99733 375 aaKnown RBP18.08■□□□□ 0.48
PTPA-225ENST00000455240 LXNQ9BS40 222 aa18.08■□□□□ 0.48
PTPA-225ENST00000455240 VN1R3Q9BXE9 311 aa18.08■□□□□ 0.48
PTPA-225ENST00000455240 STK39Q9UEW8 545 aa18.08■□□□□ 0.48
PTPA-225ENST00000455240 CNTNAP2Q9UHC6 1331 aa18.07■□□□□ 0.48
PTPA-225ENST00000455240 GAS2O43903 313 aaKnown RBP18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms