RNA–Protein interactions for RNA: ENST00000454952.1

NIF3L1-209, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 5

Gene NIF3L1, Length 719 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-209ENST00000454952 RNF19AQ9NV58 838 aa9.03□□□□□ -0.96
NIF3L1-209ENST00000454952 HCSTQ9UBK5 93 aa9.03□□□□□ -0.96
NIF3L1-209ENST00000454952 USTQ9Y2C2 406 aa9.03□□□□□ -0.96
NIF3L1-209ENST00000454952 HCFC2Q9Y5Z7 792 aa9.03□□□□□ -0.96
NIF3L1-209ENST00000454952 MSH4O15457 936 aa9.02□□□□□ -0.97
NIF3L1-209ENST00000454952 DKC1O60832 514 aaKnown RBP eCLIP9.02□□□□□ -0.97
NIF3L1-209ENST00000454952 CLASP2O75122 1294 aaKnown RBP9.02□□□□□ -0.97
NIF3L1-209ENST00000454952 CXCL14O95715 111 aa9.02□□□□□ -0.97
NIF3L1-209ENST00000454952 CA8P35219 290 aa9.02□□□□□ -0.97
NIF3L1-209ENST00000454952 MLLT3P42568 568 aaPredicted RBP9.02□□□□□ -0.97
NIF3L1-209ENST00000454952 BCAR1P56945 870 aa9.02□□□□□ -0.97
NIF3L1-209ENST00000454952 RBM10P98175 930 aaKnown RBP9.02□□□□□ -0.97
NIF3L1-209ENST00000454952 TARBP2Q15633 366 aaKnown RBP9.02□□□□□ -0.97
NIF3L1-209ENST00000454952 ADCK5Q3MIX3 580 aa9.02□□□□□ -0.97
NIF3L1-209ENST00000454952 TWF2Q6IBS0 349 aaKnown RBP9.02□□□□□ -0.97
NIF3L1-209ENST00000454952 GALNT17Q6IS24 598 aa9.02□□□□□ -0.97
NIF3L1-209ENST00000454952 KIAA1841Q6NSI8 718 aa9.02□□□□□ -0.97
NIF3L1-209ENST00000454952 ELMSAN1Q6PJG2 1045 aa9.02□□□□□ -0.97
NIF3L1-209ENST00000454952 Q6ZUG5 572 aa9.02□□□□□ -0.97
NIF3L1-209ENST00000454952 CENPQQ7L2Z9 268 aaPredicted RBP9.02□□□□□ -0.97
NIF3L1-209ENST00000454952 MIER3Q7Z3K6 550 aa9.02□□□□□ -0.97
NIF3L1-209ENST00000454952 DDX53Q86TM3 631 aaKnown RBP9.02□□□□□ -0.97
NIF3L1-209ENST00000454952 ZDHHC14Q8IZN3 488 aa9.02□□□□□ -0.97
NIF3L1-209ENST00000454952 HELQQ8TDG4 1101 aa9.02□□□□□ -0.97
NIF3L1-209ENST00000454952 ATOH1Q92858 354 aaPredicted RBP9.02□□□□□ -0.97
NIF3L1-209ENST00000454952 SLC5A5Q92911 643 aa9.02□□□□□ -0.97
NIF3L1-209ENST00000454952 BRF1Q92994 677 aa9.02□□□□□ -0.97
NIF3L1-209ENST00000454952 LENG9Q96B70 501 aa9.02□□□□□ -0.97
NIF3L1-209ENST00000454952 PGBD4Q96DM1 585 aa9.02□□□□□ -0.97
NIF3L1-209ENST00000454952 SEPT9Q9UHD8 586 aaPredicted RBP9.02□□□□□ -0.97
NIF3L1-209ENST00000454952 PPME1Q9Y570 386 aa9.02□□□□□ -0.97
NIF3L1-209ENST00000454952 IRAK3Q9Y616 596 aa9.02□□□□□ -0.97
NIF3L1-209ENST00000454952 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP9.01□□□□□ -0.97
NIF3L1-209ENST00000454952 CHMP2AO43633 222 aa9.01□□□□□ -0.97
NIF3L1-209ENST00000454952 ZNF862O60290 1169 aa9.01□□□□□ -0.97
NIF3L1-209ENST00000454952 GFRA3O60609 400 aa9.01□□□□□ -0.97
NIF3L1-209ENST00000454952 ZNF623O75123 536 aa9.01□□□□□ -0.97
NIF3L1-209ENST00000454952 ZC3H11AO75152 810 aaKnown RBP eCLIP9.01□□□□□ -0.97
NIF3L1-209ENST00000454952 CTSAP10619 480 aa9.01□□□□□ -0.97
NIF3L1-209ENST00000454952 IFNAR1P17181 557 aa9.01□□□□□ -0.97
NIF3L1-209ENST00000454952 PBX3P40426 434 aa9.01□□□□□ -0.97
NIF3L1-209ENST00000454952 PHKA2P46019 1235 aa9.01□□□□□ -0.97
NIF3L1-209ENST00000454952 VCPP55072 806 aaKnown RBP9.01□□□□□ -0.97
NIF3L1-209ENST00000454952 NLRP5P59047 1200 aa9.01□□□□□ -0.97
NIF3L1-209ENST00000454952 IRX6P78412 446 aaPredicted RBP9.01□□□□□ -0.97
NIF3L1-209ENST00000454952 RNASELQ05823 741 aaKnown RBP9.01□□□□□ -0.97
NIF3L1-209ENST00000454952 Q4G0T1 1027 aa9.01□□□□□ -0.97
NIF3L1-209ENST00000454952 NOMO2Q5JPE7 1267 aa9.01□□□□□ -0.97
NIF3L1-209ENST00000454952 CPLX2Q6PUV4 134 aaKnown RBP9.01□□□□□ -0.97
NIF3L1-209ENST00000454952 MOXD1Q6UVY6 613 aa9.01□□□□□ -0.97
NIF3L1-209ENST00000454952 CABP7Q86V35 215 aa9.01□□□□□ -0.97
NIF3L1-209ENST00000454952 VPS52Q8N1B4 723 aa9.01□□□□□ -0.97
NIF3L1-209ENST00000454952 URGCPQ8TCY9 931 aa9.01□□□□□ -0.97
NIF3L1-209ENST00000454952 KCNB2Q92953 911 aa9.01□□□□□ -0.97
NIF3L1-209ENST00000454952 ACSF2Q96CM8 615 aaPredicted RBP9.01□□□□□ -0.97
NIF3L1-209ENST00000454952 JAKMIP1Q96N16 626 aaKnown RBP9.01□□□□□ -0.97
NIF3L1-209ENST00000454952 APOL5Q9BWW9 433 aa9.01□□□□□ -0.97
NIF3L1-209ENST00000454952 SLC26A6Q9BXS9 759 aa9.01□□□□□ -0.97
NIF3L1-209ENST00000454952 EMILIN2Q9BXX0 1053 aa9.01□□□□□ -0.97
NIF3L1-209ENST00000454952 ZBP1Q9H171 429 aa9.01□□□□□ -0.97
NIF3L1-209ENST00000454952 UNC45AQ9H3U1 944 aa9.01□□□□□ -0.97
NIF3L1-209ENST00000454952 POMKQ9H5K3 350 aa9.01□□□□□ -0.97
NIF3L1-209ENST00000454952 KANSL3Q9P2N6 904 aa9.01□□□□□ -0.97
NIF3L1-209ENST00000454952 DPP7Q9UHL4 492 aa9.01□□□□□ -0.97
NIF3L1-209ENST00000454952 DBR1Q9UK59 544 aaKnown RBP9.01□□□□□ -0.97
NIF3L1-209ENST00000454952 SSX2IPQ9Y2D8 614 aa9.01□□□□□ -0.97
NIF3L1-209ENST00000454952 PTPRZ1P23471 2315 aaPredicted RBP9□□□□□ -0.97
NIF3L1-209ENST00000454952 TRIOO75962 3097 aa9□□□□□ -0.97
NIF3L1-209ENST00000454952 CYP3A7-CYP3A51PA0A087WV96 503 aa9□□□□□ -0.97
NIF3L1-209ENST00000454952 IGKV6-21A0A0C4DH24 114 aa9□□□□□ -0.97
NIF3L1-209ENST00000454952 C2CD4DB7Z1M9 353 aa9□□□□□ -0.97
NIF3L1-209ENST00000454952 PROB1E7EW31 1015 aa9□□□□□ -0.97
NIF3L1-209ENST00000454952 REC8O95072 547 aa9□□□□□ -0.97
NIF3L1-209ENST00000454952 RPS6KB1P23443 525 aa9□□□□□ -0.97
NIF3L1-209ENST00000454952 CYP3A7P24462 503 aa9□□□□□ -0.97
NIF3L1-209ENST00000454952 HSPA4P34932 840 aa9□□□□□ -0.97
NIF3L1-209ENST00000454952 PSMC5P62195 406 aa9□□□□□ -0.97
NIF3L1-209ENST00000454952 FOXK2Q01167 660 aa9□□□□□ -0.97
NIF3L1-209ENST00000454952 PCBP1Q15365 356 aaKnown RBP eCLIP9□□□□□ -0.97
NIF3L1-209ENST00000454952 MTERF2Q49AM1 385 aa9□□□□□ -0.97
NIF3L1-209ENST00000454952 RARS2Q5T160 578 aaKnown RBP9□□□□□ -0.97
NIF3L1-209ENST00000454952 OTOP3Q7RTS5 596 aa9□□□□□ -0.97
NIF3L1-209ENST00000454952 CATSPER4Q7RTX7 472 aa9□□□□□ -0.97
NIF3L1-209ENST00000454952 SLC7A3Q8WY07 619 aa9□□□□□ -0.97
NIF3L1-209ENST00000454952 PHKBQ93100 1093 aa9□□□□□ -0.97
NIF3L1-209ENST00000454952 IGSF21Q96ID5 467 aa9□□□□□ -0.97
NIF3L1-209ENST00000454952 FAM193BQ96PV7 902 aaPredicted RBP9□□□□□ -0.97
NIF3L1-209ENST00000454952 AGXT2Q9BYV1 514 aa9□□□□□ -0.97
NIF3L1-209ENST00000454952 MFSD1Q9H3U5 465 aa9□□□□□ -0.97
NIF3L1-209ENST00000454952 SFXN1Q9H9B4 322 aa9□□□□□ -0.97
NIF3L1-209ENST00000454952 FAM105AQ9NUU6 356 aa9□□□□□ -0.97
NIF3L1-209ENST00000454952 VPS54Q9P1Q0 977 aa9□□□□□ -0.97
NIF3L1-209ENST00000454952 SUCLA2Q9P2R7 463 aaPredicted RBP9□□□□□ -0.97
NIF3L1-209ENST00000454952 PCDHA4Q9UN74 947 aa9□□□□□ -0.97
NIF3L1-209ENST00000454952 PIN4Q9Y237 131 aaKnown RBP9□□□□□ -0.97
NIF3L1-209ENST00000454952 CNTNAP2Q9UHC6 1331 aa9□□□□□ -0.97
NIF3L1-209ENST00000454952 A0A087WZ62 844 aa8.99□□□□□ -0.97
NIF3L1-209ENST00000454952 DDX11L8A8MPP1 907 aa8.99□□□□□ -0.97
NIF3L1-209ENST00000454952 CPLX1O14810 134 aa8.99□□□□□ -0.97
NIF3L1-209ENST00000454952 GAS2O43903 313 aaKnown RBP8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms