RNA–Protein interactions for RNA: ENST00000453796.1

HSPG2-207, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 621 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-207ENST00000453796 NFKBIZQ9BYH8 718 aa16.2■□□□□ 0.18
HSPG2-207ENST00000453796 NSUN3Q9H649 340 aaKnown RBP16.2■□□□□ 0.18
HSPG2-207ENST00000453796 ALG13Q9NP73 1137 aaKnown RBP16.2■□□□□ 0.18
HSPG2-207ENST00000453796 FAM105AQ9NUU6 356 aa16.2■□□□□ 0.18
HSPG2-207ENST00000453796 LRWD1Q9UFC0 647 aa16.2■□□□□ 0.18
HSPG2-207ENST00000453796 GTF3C3Q9Y5Q9 886 aa16.2■□□□□ 0.18
HSPG2-207ENST00000453796 TCEAL5Q5H9L2 206 aa16.19■□□□□ 0.18
HSPG2-207ENST00000453796 UBXN11Q5T124 520 aa16.19■□□□□ 0.18
HSPG2-207ENST00000453796 TWF2Q6IBS0 349 aaKnown RBP16.19■□□□□ 0.18
HSPG2-207ENST00000453796 CCDC43Q96MW1 224 aaKnown RBP16.19■□□□□ 0.18
HSPG2-207ENST00000453796 MMTAG2Q9BU76 263 aaKnown RBP16.19■□□□□ 0.18
HSPG2-207ENST00000453796 POLR3FQ9H1D9 316 aaPredicted RBP16.19■□□□□ 0.18
HSPG2-207ENST00000453796 GPRC5CQ9NQ84 441 aa16.19■□□□□ 0.18
HSPG2-207ENST00000453796 CUL9Q8IWT3 2517 aa16.18■□□□□ 0.18
HSPG2-207ENST00000453796 MEIS3P2A8K0S8 358 aa16.18■□□□□ 0.18
HSPG2-207ENST00000453796 SKIP12755 728 aa16.18■□□□□ 0.18
HSPG2-207ENST00000453796 BMP1P13497 986 aa16.18■□□□□ 0.18
HSPG2-207ENST00000453796 CCT6AP40227 531 aaKnown RBP16.18■□□□□ 0.18
HSPG2-207ENST00000453796 RAB27AP51159 221 aa16.18■□□□□ 0.18
HSPG2-207ENST00000453796 MBTD1Q05BQ5 628 aa16.18■□□□□ 0.18
HSPG2-207ENST00000453796 TFDP1Q14186 410 aa16.18■□□□□ 0.18
HSPG2-207ENST00000453796 PCBP1Q15365 356 aaKnown RBP eCLIP16.18■□□□□ 0.183e-6■■■■□ 19.6
HSPG2-207ENST00000453796 AMHR2Q16671 573 aa16.18■□□□□ 0.18
HSPG2-207ENST00000453796 MCPH1Q8NEM0 835 aa16.18■□□□□ 0.18
HSPG2-207ENST00000453796 HELQQ8TDG4 1101 aa16.18■□□□□ 0.18
HSPG2-207ENST00000453796 SYMPKQ92797 1274 aaKnown RBP16.18■□□□□ 0.18
HSPG2-207ENST00000453796 RAB34Q9BZG1 259 aa16.18■□□□□ 0.18
HSPG2-207ENST00000453796 UBE2ZQ9H832 354 aaPredicted RBP16.18■□□□□ 0.18
HSPG2-207ENST00000453796 STK24Q9Y6E0 443 aa16.18■□□□□ 0.18
HSPG2-207ENST00000453796 MYH11P35749 1972 aa16.18■□□□□ 0.18
HSPG2-207ENST00000453796 TDRD15B5MCY1 1934 aaKnown RBP16.17■□□□□ 0.18
HSPG2-207ENST00000453796 PP2D1A8MPX8 630 aa16.17■□□□□ 0.18
HSPG2-207ENST00000453796 TSPAN1O60635 241 aa16.17■□□□□ 0.18
HSPG2-207ENST00000453796 LAG3P18627 525 aa16.17■□□□□ 0.18
HSPG2-207ENST00000453796 CYP11B2P19099 503 aa16.17■□□□□ 0.18
HSPG2-207ENST00000453796 KCNQ1P51787 676 aa16.17■□□□□ 0.18
HSPG2-207ENST00000453796 AAK1Q2M2I8 961 aa16.17■□□□□ 0.18
HSPG2-207ENST00000453796 SPOUT1Q5T280 376 aaKnown RBP16.17■□□□□ 0.18
HSPG2-207ENST00000453796 PADI6Q6TGC4 694 aa16.17■□□□□ 0.18
HSPG2-207ENST00000453796 DTHD1Q6ZMT9 781 aa16.17■□□□□ 0.18
HSPG2-207ENST00000453796 MRPL10Q7Z7H8 261 aaKnown RBP16.17■□□□□ 0.18
HSPG2-207ENST00000453796 ABI1Q8IZP0 508 aa16.17■□□□□ 0.18
HSPG2-207ENST00000453796 LRRC43Q8N309 656 aa16.17■□□□□ 0.18
HSPG2-207ENST00000453796 RNF169Q8NCN4 708 aa16.17■□□□□ 0.18
HSPG2-207ENST00000453796 SNX29Q8TEQ0 813 aa16.17■□□□□ 0.18
HSPG2-207ENST00000453796 POF1BQ8WVV4 589 aa16.17■□□□□ 0.18
HSPG2-207ENST00000453796 RSPH1Q8WYR4 309 aa16.17■□□□□ 0.18
HSPG2-207ENST00000453796 LPPQ93052 612 aa16.17■□□□□ 0.18
HSPG2-207ENST00000453796 AAASQ9NRG9 546 aa16.17■□□□□ 0.18
HSPG2-207ENST00000453796 PCDHB12Q9Y5F1 795 aa16.17■□□□□ 0.18
HSPG2-207ENST00000453796 MYH15Q9Y2K3 1946 aa16.16■□□□□ 0.18
HSPG2-207ENST00000453796 ARHGEF35A5YM69 484 aa16.16■□□□□ 0.18
HSPG2-207ENST00000453796 FGF18O76093 207 aa16.16■□□□□ 0.18
HSPG2-207ENST00000453796 CDC25AP30304 524 aa16.16■□□□□ 0.18
HSPG2-207ENST00000453796 AXLP30530 894 aa16.16■□□□□ 0.18
HSPG2-207ENST00000453796 IRS1P35568 1242 aa16.16■□□□□ 0.18
HSPG2-207ENST00000453796 UBE3AQ05086 875 aa16.16■□□□□ 0.18
HSPG2-207ENST00000453796 HYAL1Q12794 435 aa16.16■□□□□ 0.18
HSPG2-207ENST00000453796 CSPP1Q1MSJ5 1256 aa16.16■□□□□ 0.18
HSPG2-207ENST00000453796 HYIQ5T013 277 aa16.16■□□□□ 0.18
HSPG2-207ENST00000453796 ARL6IP4Q66PJ3 421 aaKnown RBP16.16■□□□□ 0.18
HSPG2-207ENST00000453796 CDCA2Q69YH5 1023 aaPredicted RBP16.16■□□□□ 0.18
HSPG2-207ENST00000453796 KCNT2Q6UVM3 1135 aa16.16■□□□□ 0.18
HSPG2-207ENST00000453796 AGMOQ6ZNB7 445 aa16.16■□□□□ 0.18
HSPG2-207ENST00000453796 MAEAQ7L5Y9 396 aa16.16■□□□□ 0.18
HSPG2-207ENST00000453796 BRAPQ7Z569 592 aa16.16■□□□□ 0.18
HSPG2-207ENST00000453796 BSNDQ8WZ55 320 aa16.16■□□□□ 0.18
HSPG2-207ENST00000453796 INTS4Q96HW7 963 aaKnown RBP16.16■□□□□ 0.18
HSPG2-207ENST00000453796 BHMT2Q9H2M3 363 aa16.16■□□□□ 0.18
HSPG2-207ENST00000453796 DDX19AQ9NUU7 478 aaKnown RBP16.16■□□□□ 0.18
HSPG2-207ENST00000453796 KIAA1024Q9UPX6 916 aa16.16■□□□□ 0.18
HSPG2-207ENST00000453796 PCDHB2Q9Y5E7 798 aa16.16■□□□□ 0.18
HSPG2-207ENST00000453796 INO80B-WBP1J3KQ70 363 aa16.15■□□□□ 0.18
HSPG2-207ENST00000453796 OFD1O75665 1012 aa16.15■□□□□ 0.18
HSPG2-207ENST00000453796 ERLIN2O94905 339 aa16.15■□□□□ 0.18
HSPG2-207ENST00000453796 NCLP19338 710 aaKnown RBP16.15■□□□□ 0.18
HSPG2-207ENST00000453796 PLCB3Q01970 1234 aa16.15■□□□□ 0.18
HSPG2-207ENST00000453796 CTC1Q2NKJ3 1217 aa16.15■□□□□ 0.18
HSPG2-207ENST00000453796 KRT79Q5XKE5 535 aa16.15■□□□□ 0.18
HSPG2-207ENST00000453796 KCNK18Q7Z418 384 aa16.15■□□□□ 0.18
HSPG2-207ENST00000453796 SMG8Q8ND04 991 aaKnown RBP16.15■□□□□ 0.18
HSPG2-207ENST00000453796 TTC28Q96AY4 2481 aa16.15■□□□□ 0.18
HSPG2-207ENST00000453796 PABPC5Q96DU9 382 aaKnown RBP16.15■□□□□ 0.18
HSPG2-207ENST00000453796 CPB2Q96IY4 423 aa16.15■□□□□ 0.18
HSPG2-207ENST00000453796 MRPL9Q9BYD2 267 aaKnown RBP16.15■□□□□ 0.18
HSPG2-207ENST00000453796 LZTS1Q9Y250 596 aa16.15■□□□□ 0.18
HSPG2-207ENST00000453796 E9PMD0 336 aa16.14■□□□□ 0.17
HSPG2-207ENST00000453796 K7ELQ4 463 aaPredicted RBP16.14■□□□□ 0.17
HSPG2-207ENST00000453796 B4GALT5O43286 388 aa16.14■□□□□ 0.17
HSPG2-207ENST00000453796 EYA4O95677 639 aa16.14■□□□□ 0.17
HSPG2-207ENST00000453796 ARF4P18085 180 aaPredicted RBP16.14■□□□□ 0.17
HSPG2-207ENST00000453796 PBX3P40426 434 aa16.14■□□□□ 0.17
HSPG2-207ENST00000453796 LEXMQ3ZCV2 418 aa16.14■□□□□ 0.17
HSPG2-207ENST00000453796 LONRF3Q496Y0 759 aa16.14■□□□□ 0.17
HSPG2-207ENST00000453796 NOTUMQ6P988 496 aa16.14■□□□□ 0.17
HSPG2-207ENST00000453796 PPP4R3CPQ6ZMV5 832 aa16.14■□□□□ 0.17
HSPG2-207ENST00000453796 ADGRD2Q7Z7M1 963 aa16.14■□□□□ 0.17
HSPG2-207ENST00000453796 THNSL1Q8IYQ7 743 aa16.14■□□□□ 0.17
HSPG2-207ENST00000453796 PGBD4Q96DM1 585 aa16.14■□□□□ 0.17
HSPG2-207ENST00000453796 CCDC51Q96ER9 411 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms