RNA–Protein interactions for RNA: ENST00000452837.6

THUMPD3-206, Transcript of THUMP domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene THUMPD3, Length 2,877 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD3-206ENST00000452837 RAB17Q9H0T7 212 aa13.6□□□□□ -0.23
THUMPD3-206ENST00000452837 PABPC3Q9H361 631 aaKnown RBP13.6□□□□□ -0.23
THUMPD3-206ENST00000452837 AGPAT3Q9NRZ7 376 aa13.6□□□□□ -0.23
THUMPD3-206ENST00000452837 GREB1LQ9C091 1923 aaPredicted RBP13.6□□□□□ -0.23
THUMPD3-206ENST00000452837 CHUKO15111 745 aa13.6□□□□□ -0.23
THUMPD3-206ENST00000452837 NDUFB10O96000 172 aa13.6□□□□□ -0.23
THUMPD3-206ENST00000452837 MMEP08473 750 aa13.6□□□□□ -0.23
THUMPD3-206ENST00000452837 MAPK7Q13164 816 aa13.6□□□□□ -0.23
THUMPD3-206ENST00000452837 NBPF9Q3BBW0 867 aa13.6□□□□□ -0.23
THUMPD3-206ENST00000452837 CERKLQ49MI3 558 aaPredicted RBP13.6□□□□□ -0.23
THUMPD3-206ENST00000452837 CCDC38Q502W7 563 aa13.6□□□□□ -0.23
THUMPD3-206ENST00000452837 ARHGEF19Q8IW93 802 aa13.6□□□□□ -0.23
THUMPD3-206ENST00000452837 PARP9Q8IXQ6 854 aa13.6□□□□□ -0.23
THUMPD3-206ENST00000452837 LRRC34Q8IZ02 419 aa13.6□□□□□ -0.23
THUMPD3-206ENST00000452837 SPICE1Q8N0Z3 855 aa13.6□□□□□ -0.23
THUMPD3-206ENST00000452837 C3orf20Q8ND61 904 aa13.6□□□□□ -0.23
THUMPD3-206ENST00000452837 LMO3Q8TAP4 145 aa13.6□□□□□ -0.23
THUMPD3-206ENST00000452837 MKL1Q969V6 931 aa13.6□□□□□ -0.23
THUMPD3-206ENST00000452837 HOOK2Q96ED9 719 aa13.6□□□□□ -0.23
THUMPD3-206ENST00000452837 BTBD6Q96KE9 485 aa13.6□□□□□ -0.23
THUMPD3-206ENST00000452837 FAM20AQ96MK3 541 aa13.6□□□□□ -0.23
THUMPD3-206ENST00000452837 POLR3CQ9BUI4 534 aaPredicted RBP13.6□□□□□ -0.23
THUMPD3-206ENST00000452837 ACTR5Q9H9F9 607 aaPredicted RBP13.6□□□□□ -0.23
THUMPD3-206ENST00000452837 APEX2Q9UBZ4 518 aa13.6□□□□□ -0.23
THUMPD3-206ENST00000452837 PCDHA3Q9Y5H8 950 aa13.6□□□□□ -0.23
THUMPD3-206ENST00000452837 SRCAPQ6ZRS2 3230 aa13.6□□□□□ -0.23
THUMPD3-206ENST00000452837 FOXO6A8MYZ6 492 aa13.59□□□□□ -0.23
THUMPD3-206ENST00000452837 NUDT17P0C025 328 aa13.59□□□□□ -0.23
THUMPD3-206ENST00000452837 ZNF76P36508 570 aa13.59□□□□□ -0.23
THUMPD3-206ENST00000452837 OTOP1Q7RTM1 612 aa13.59□□□□□ -0.23
THUMPD3-206ENST00000452837 ZNF720Q7Z2F6 126 aa13.59□□□□□ -0.23
THUMPD3-206ENST00000452837 DCAF4Q8WV16 495 aa13.59□□□□□ -0.23
THUMPD3-206ENST00000452837 POP1Q99575 1024 aaKnown RBP13.59□□□□□ -0.23
THUMPD3-206ENST00000452837 GLT8D2Q9H1C3 349 aa13.59□□□□□ -0.23
THUMPD3-206ENST00000452837 CIITAP33076 1130 aa13.59□□□□□ -0.23
THUMPD3-206ENST00000452837 MMP13P45452 471 aa13.59□□□□□ -0.23
THUMPD3-206ENST00000452837 KCNJ1P48048 391 aa13.59□□□□□ -0.23
THUMPD3-206ENST00000452837 LACTB2Q53H82 288 aaPredicted RBP13.59□□□□□ -0.23
THUMPD3-206ENST00000452837 NEK9Q8TD19 979 aa13.59□□□□□ -0.23
THUMPD3-206ENST00000452837 CXorf56Q9H5V9 222 aa13.59□□□□□ -0.23
THUMPD3-206ENST00000452837 A1CFQ9NQ94 594 aaKnown RBP13.59□□□□□ -0.23
THUMPD3-206ENST00000452837 DMAC2Q9NW81 257 aa13.59□□□□□ -0.23
THUMPD3-206ENST00000452837 C10orf71Q711Q0 1435 aa13.59□□□□□ -0.23
THUMPD3-206ENST00000452837 ANKRD62A6NC57 917 aa13.58□□□□□ -0.23
THUMPD3-206ENST00000452837 FTLP02792 175 aaPredicted RBP13.58□□□□□ -0.23
THUMPD3-206ENST00000452837 SETQ01105 290 aaPredicted RBP13.58□□□□□ -0.23
THUMPD3-206ENST00000452837 MYL7Q01449 175 aa13.58□□□□□ -0.23
THUMPD3-206ENST00000452837 ICA1Q05084 483 aa13.58□□□□□ -0.23
THUMPD3-206ENST00000452837 RRP1BQ14684 758 aaKnown RBP13.58□□□□□ -0.23
THUMPD3-206ENST00000452837 MAEAQ7L5Y9 396 aa13.58□□□□□ -0.23
THUMPD3-206ENST00000452837 ELMO3Q96BJ8 720 aa13.58□□□□□ -0.23
THUMPD3-206ENST00000452837 SCLT1Q96NL6 688 aa13.58□□□□□ -0.23
THUMPD3-206ENST00000452837 PCDHB18PQ96TA0 734 aa13.58□□□□□ -0.23
THUMPD3-206ENST00000452837 PRMT1Q99873 361 aaKnown RBP13.58□□□□□ -0.23
THUMPD3-206ENST00000452837 COA1Q9GZY4 146 aa13.58□□□□□ -0.23
THUMPD3-206ENST00000452837 PCIF1Q9H4Z3 704 aa13.58□□□□□ -0.23
THUMPD3-206ENST00000452837 PARVGQ9HBI0 331 aa13.58□□□□□ -0.23
THUMPD3-206ENST00000452837 NYAP2Q9P242 653 aa13.58□□□□□ -0.23
THUMPD3-206ENST00000452837 FAM198AQ9UFP1 575 aa13.58□□□□□ -0.23
THUMPD3-206ENST00000452837 DBR1Q9UK59 544 aaKnown RBP13.58□□□□□ -0.23
THUMPD3-206ENST00000452837 PPEF1O14829 653 aaPredicted RBP13.58□□□□□ -0.24
THUMPD3-206ENST00000452837 EIF3DO15371 548 aaKnown RBP eCLIP13.58□□□□□ -0.24
THUMPD3-206ENST00000452837 HOXA10P31260 410 aaPredicted RBP13.58□□□□□ -0.24
THUMPD3-206ENST00000452837 IFNAR2P48551 515 aa13.58□□□□□ -0.24
THUMPD3-206ENST00000452837 EIF3BP55884 814 aaKnown RBP13.58□□□□□ -0.24
THUMPD3-206ENST00000452837 DENND2CQ68D51 928 aa13.58□□□□□ -0.24
THUMPD3-206ENST00000452837 SGSM3Q96HU1 749 aa13.58□□□□□ -0.24
THUMPD3-206ENST00000452837 AGPAT1Q99943 283 aa13.58□□□□□ -0.24
THUMPD3-206ENST00000452837 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.58□□□□□ -0.24
THUMPD3-206ENST00000452837 CTTNBP2NLQ9P2B4 639 aa13.58□□□□□ -0.24
THUMPD3-206ENST00000452837 GGT7Q9UJ14 662 aa13.58□□□□□ -0.24
THUMPD3-206ENST00000452837 PTPN22Q9Y2R2 807 aa13.58□□□□□ -0.24
THUMPD3-206ENST00000452837 PPIP5K2O43314 1243 aa13.57□□□□□ -0.24
THUMPD3-206ENST00000452837 TRIM37O94972 964 aa13.57□□□□□ -0.24
THUMPD3-206ENST00000452837 PYGMP11217 842 aa13.57□□□□□ -0.24
THUMPD3-206ENST00000452837 CREB1P16220 341 aa13.57□□□□□ -0.24
THUMPD3-206ENST00000452837 CRKP46108 304 aa13.57□□□□□ -0.24
THUMPD3-206ENST00000452837 MMP14P50281 582 aa13.57□□□□□ -0.24
THUMPD3-206ENST00000452837 E2F5Q15329 346 aa13.57□□□□□ -0.24
THUMPD3-206ENST00000452837 PREPLQ4J6C6 727 aaPredicted RBP13.57□□□□□ -0.24
THUMPD3-206ENST00000452837 SYDE2Q5VT97 1194 aa13.57□□□□□ -0.24
THUMPD3-206ENST00000452837 CEP57Q86XR8 500 aa13.57□□□□□ -0.24
THUMPD3-206ENST00000452837 NGLY1Q96IV0 654 aa13.57□□□□□ -0.24
THUMPD3-206ENST00000452837 CCDC17Q96LX7 622 aa13.57□□□□□ -0.24
THUMPD3-206ENST00000452837 UBE2TQ9NPD8 197 aaPredicted RBP13.57□□□□□ -0.24
THUMPD3-206ENST00000452837 A0A1W2PRG0 241 aa13.57□□□□□ -0.24
THUMPD3-206ENST00000452837 CCT8L1PA6NM43 557 aa13.57□□□□□ -0.24
THUMPD3-206ENST00000452837 PHF2O75151 1096 aa13.57□□□□□ -0.24
THUMPD3-206ENST00000452837 GAP43P17677 238 aa13.57□□□□□ -0.24
THUMPD3-206ENST00000452837 COMTP21964 271 aa13.57□□□□□ -0.24
THUMPD3-206ENST00000452837 PPP3CAQ08209 521 aa13.57□□□□□ -0.24
THUMPD3-206ENST00000452837 XRCC4Q13426 336 aa13.57□□□□□ -0.24
THUMPD3-206ENST00000452837 MESDQ14696 234 aa13.57□□□□□ -0.24
THUMPD3-206ENST00000452837 KIF22Q14807 665 aa13.57□□□□□ -0.24
THUMPD3-206ENST00000452837 ODR4Q5SWX8 454 aa13.57□□□□□ -0.24
THUMPD3-206ENST00000452837 KIAA0825Q8IV33 1275 aa13.57□□□□□ -0.24
THUMPD3-206ENST00000452837 FAM178BQ8IXR5 827 aa13.57□□□□□ -0.24
THUMPD3-206ENST00000452837 TEKT1Q969V4 418 aa13.57□□□□□ -0.24
THUMPD3-206ENST00000452837 ELAC2Q9BQ52 826 aaKnown RBP13.57□□□□□ -0.24
THUMPD3-206ENST00000452837 CNOT10Q9H9A5 744 aaKnown RBP13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms