RNA–Protein interactions for RNA: ENST00000452322.2

LINC00339-205, long intergenic non-protein coding RNA 339, humanhuman

TSL 3

Gene LINC00339, Length 1,391 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-205ENST00000452322 HOOK1Q9UJC3 728 aaKnown RBP13.13□□□□□ -0.31
LINC00339-205ENST00000452322 NOC2LQ9Y3T9 749 aaKnown RBP13.13□□□□□ -0.31
LINC00339-205ENST00000452322 PHLPP2Q6ZVD8 1323 aa13.13□□□□□ -0.31
LINC00339-205ENST00000452322 ADGRA3Q8IWK6 1321 aa13.13□□□□□ -0.31
LINC00339-205ENST00000452322 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.12□□□□□ -0.31
LINC00339-205ENST00000452322 CCDC169A6NNP5 214 aa13.12□□□□□ -0.31
LINC00339-205ENST00000452322 H0YCG3 227 aa13.12□□□□□ -0.31
LINC00339-205ENST00000452322 TRAK2O60296 914 aa13.12□□□□□ -0.31
LINC00339-205ENST00000452322 MBD3O95983 291 aa13.12□□□□□ -0.31
LINC00339-205ENST00000452322 PRR29P0C7W0 189 aa13.12□□□□□ -0.31
LINC00339-205ENST00000452322 MAPTP10636 758 aaKnown RBP13.12□□□□□ -0.31
LINC00339-205ENST00000452322 SCP2P22307 547 aa13.12□□□□□ -0.31
LINC00339-205ENST00000452322 SFPQP23246 707 aaKnown RBP eCLIP13.12□□□□□ -0.31
LINC00339-205ENST00000452322 EFNA5P52803 228 aa13.12□□□□□ -0.31
LINC00339-205ENST00000452322 NCKAP1LP55160 1127 aa13.12□□□□□ -0.31
LINC00339-205ENST00000452322 MDM2Q00987 491 aaPredicted RBP13.12□□□□□ -0.31
LINC00339-205ENST00000452322 MBTD1Q05BQ5 628 aa13.12□□□□□ -0.31
LINC00339-205ENST00000452322 DPYDQ12882 1025 aa13.12□□□□□ -0.31
LINC00339-205ENST00000452322 PAK2Q13177 524 aa13.12□□□□□ -0.31
LINC00339-205ENST00000452322 PLEKHG4Q58EX7 1191 aa13.12□□□□□ -0.31
LINC00339-205ENST00000452322 HERC4Q5GLZ8 1057 aaPredicted RBP13.12□□□□□ -0.31
LINC00339-205ENST00000452322 FAM43BQ6ZT52 329 aaPredicted RBP13.12□□□□□ -0.31
LINC00339-205ENST00000452322 FAM228AQ86W67 206 aa13.12□□□□□ -0.31
LINC00339-205ENST00000452322 FAM178BQ8IXR5 827 aa13.12□□□□□ -0.31
LINC00339-205ENST00000452322 SLC17A8Q8NDX2 589 aa13.12□□□□□ -0.31
LINC00339-205ENST00000452322 APBB2Q92870 758 aa13.12□□□□□ -0.31
LINC00339-205ENST00000452322 KCNN1Q92952 543 aa13.12□□□□□ -0.31
LINC00339-205ENST00000452322 FIZ1Q96SL8 496 aa13.12□□□□□ -0.31
LINC00339-205ENST00000452322 KIFC3Q9BVG8 833 aa13.12□□□□□ -0.31
LINC00339-205ENST00000452322 IFIH1Q9BYX4 1025 aaKnown RBP13.12□□□□□ -0.31
LINC00339-205ENST00000452322 OSBPL7Q9BZF2 842 aa13.12□□□□□ -0.31
LINC00339-205ENST00000452322 MINDY3Q9H8M7 445 aa13.12□□□□□ -0.31
LINC00339-205ENST00000452322 AGO3Q9H9G7 860 aaKnown RBP13.12□□□□□ -0.31
LINC00339-205ENST00000452322 IL23AQ9NPF7 189 aa13.12□□□□□ -0.31
LINC00339-205ENST00000452322 PCDH10Q9P2E7 1040 aa13.12□□□□□ -0.31
LINC00339-205ENST00000452322 ARHGAP28Q9P2N2 729 aa13.12□□□□□ -0.31
LINC00339-205ENST00000452322 PDE4DIPQ5VU43 2346 aa13.11□□□□□ -0.31
LINC00339-205ENST00000452322 INO80B-WBP1J3KQ70 363 aa13.11□□□□□ -0.31
LINC00339-205ENST00000452322 GPR182O15218 404 aa13.11□□□□□ -0.31
LINC00339-205ENST00000452322 KLRC4O43908 158 aa13.11□□□□□ -0.31
LINC00339-205ENST00000452322 PTMSP20962 102 aa13.11□□□□□ -0.31
LINC00339-205ENST00000452322 CD52P31358 61 aa13.11□□□□□ -0.31
LINC00339-205ENST00000452322 ABCD1P33897 745 aa13.11□□□□□ -0.31
LINC00339-205ENST00000452322 EHHADHQ08426 723 aa13.11□□□□□ -0.31
LINC00339-205ENST00000452322 COASYQ13057 564 aa13.11□□□□□ -0.31
LINC00339-205ENST00000452322 DEFB128Q7Z7B8 93 aa13.11□□□□□ -0.31
LINC00339-205ENST00000452322 SFR1Q86XK3 245 aa13.11□□□□□ -0.31
LINC00339-205ENST00000452322 TMEM161BQ8NDZ6 487 aa13.11□□□□□ -0.31
LINC00339-205ENST00000452322 GPT2Q8TD30 523 aa13.11□□□□□ -0.31
LINC00339-205ENST00000452322 SEPT8Q92599 483 aa13.11□□□□□ -0.31
LINC00339-205ENST00000452322 VWCEQ96DN2 955 aa13.11□□□□□ -0.31
LINC00339-205ENST00000452322 PRIMPOLQ96LW4 560 aa13.11□□□□□ -0.31
LINC00339-205ENST00000452322 CCDC113Q9H0I3 377 aa13.11□□□□□ -0.31
LINC00339-205ENST00000452322 ST6GALNAC4Q9H4F1 302 aa13.11□□□□□ -0.31
LINC00339-205ENST00000452322 TMEM134Q9H6X4 195 aa13.11□□□□□ -0.31
LINC00339-205ENST00000452322 ERVK-5Q9HDB9 667 aa13.11□□□□□ -0.31
LINC00339-205ENST00000452322 PRMT7Q9NVM4 692 aaPredicted RBP13.11□□□□□ -0.31
LINC00339-205ENST00000452322 PADI3Q9ULW8 664 aa13.11□□□□□ -0.31
LINC00339-205ENST00000452322 CEP290O15078 2479 aa13.11□□□□□ -0.31
LINC00339-205ENST00000452322 H0YGN5 161 aa13.1□□□□□ -0.31
LINC00339-205ENST00000452322 K7ENM7 598 aa13.1□□□□□ -0.31
LINC00339-205ENST00000452322 SLC16A4O15374 487 aa13.1□□□□□ -0.31
LINC00339-205ENST00000452322 CSDE1O75534 798 aaKnown RBP13.1□□□□□ -0.31
LINC00339-205ENST00000452322 MAGEA10P43363 369 aaPredicted RBP13.1□□□□□ -0.31
LINC00339-205ENST00000452322 NFX1Q12986 1120 aaKnown RBP13.1□□□□□ -0.31
LINC00339-205ENST00000452322 PNOCQ13519 176 aa13.1□□□□□ -0.31
LINC00339-205ENST00000452322 MAPK6Q16659 721 aa13.1□□□□□ -0.31
LINC00339-205ENST00000452322 FAM187BQ17R55 369 aa13.1□□□□□ -0.31
LINC00339-205ENST00000452322 CNKSR3Q6P9H4 555 aa13.1□□□□□ -0.31
LINC00339-205ENST00000452322 PSRC1Q6PGN9 363 aaPredicted RBP13.1□□□□□ -0.31
LINC00339-205ENST00000452322 CATSPER4Q7RTX7 472 aa13.1□□□□□ -0.31
LINC00339-205ENST00000452322 DBF4BQ8NFT6 615 aa13.1□□□□□ -0.31
LINC00339-205ENST00000452322 TET1Q8NFU7 2136 aa13.1□□□□□ -0.31
LINC00339-205ENST00000452322 CCDC47Q96A33 483 aaKnown RBP13.1□□□□□ -0.31
LINC00339-205ENST00000452322 FTHL17Q9BXU8 183 aa13.1□□□□□ -0.31
LINC00339-205ENST00000452322 FZD8Q9H461 694 aa13.1□□□□□ -0.31
LINC00339-205ENST00000452322 MRPL44Q9H9J2 332 aaKnown RBP13.1□□□□□ -0.31
LINC00339-205ENST00000452322 ST3GAL5Q9UNP4 418 aa13.1□□□□□ -0.31
LINC00339-205ENST00000452322 DENND3A2RUS2 1198 aa13.09□□□□□ -0.31
LINC00339-205ENST00000452322 K7ERI5 159 aa13.09□□□□□ -0.31
LINC00339-205ENST00000452322 ERLIN2O94905 339 aa13.09□□□□□ -0.31
LINC00339-205ENST00000452322 SMC2O95347 1197 aa13.09□□□□□ -0.31
LINC00339-205ENST00000452322 RPN1P04843 607 aaKnown RBP13.09□□□□□ -0.31
LINC00339-205ENST00000452322 PRKCBP05771 671 aa13.09□□□□□ -0.31
LINC00339-205ENST00000452322 FGFR4P22455 802 aa13.09□□□□□ -0.31
LINC00339-205ENST00000452322 NMT1P30419 496 aaKnown RBP13.09□□□□□ -0.31
LINC00339-205ENST00000452322 GTF2BQ00403 316 aa13.09□□□□□ -0.31
LINC00339-205ENST00000452322 ALCAMQ13740 583 aa13.09□□□□□ -0.31
LINC00339-205ENST00000452322 KCNB1Q14721 858 aa13.09□□□□□ -0.31
LINC00339-205ENST00000452322 AMHR2Q16671 573 aa13.09□□□□□ -0.31
LINC00339-205ENST00000452322 KMT5BQ4FZB7 885 aa13.09□□□□□ -0.31
LINC00339-205ENST00000452322 FAM26FQ5R3K3 315 aa13.09□□□□□ -0.31
LINC00339-205ENST00000452322 ZNF720Q7Z2F6 126 aa13.09□□□□□ -0.31
LINC00339-205ENST00000452322 HAUS6Q7Z4H7 955 aa13.09□□□□□ -0.31
LINC00339-205ENST00000452322 SPATA20Q8TB22 786 aa13.09□□□□□ -0.31
LINC00339-205ENST00000452322 GDF15Q99988 308 aa13.09□□□□□ -0.31
LINC00339-205ENST00000452322 CLSTN2Q9H4D0 955 aa13.09□□□□□ -0.31
LINC00339-205ENST00000452322 AGPAT5Q9NUQ2 364 aa13.09□□□□□ -0.31
LINC00339-205ENST00000452322 EXOC1Q9NV70 894 aa13.09□□□□□ -0.31
LINC00339-205ENST00000452322 ACKR2O00590 384 aa13.08□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms