RNA–Protein interactions for RNA: ENST00000452162.5

PKP4-206, Transcript of plakophilin 4, humanhuman

TSL 1 (best)

Gene PKP4, Length 2,359 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-206ENST00000452162 AGO4Q9HCK5 861 aaKnown RBP11.73□□□□□ -0.53
PKP4-206ENST00000452162 JADE2Q9NQC1 790 aa11.73□□□□□ -0.53
PKP4-206ENST00000452162 XPNPEP3Q9NQH7 507 aa11.73□□□□□ -0.53
PKP4-206ENST00000452162 SEL1LQ9UBV2 794 aa11.73□□□□□ -0.53
PKP4-206ENST00000452162 GNEQ9Y223 722 aaKnown RBP11.73□□□□□ -0.53
PKP4-206ENST00000452162 TNRC18O15417 2968 aaPredicted RBP11.73□□□□□ -0.53
PKP4-206ENST00000452162 UBE4BO95155 1302 aa11.73□□□□□ -0.53
PKP4-206ENST00000452162 SFI1A8K8P3 1242 aa11.72□□□□□ -0.53
PKP4-206ENST00000452162 SLC16A3O15427 465 aaKnown RBP11.72□□□□□ -0.53
PKP4-206ENST00000452162 TGFB1I1O43294 461 aa11.72□□□□□ -0.53
PKP4-206ENST00000452162 KRT86O43790 486 aa11.72□□□□□ -0.53
PKP4-206ENST00000452162 DUSP11O75319 330 aaKnown RBP11.72□□□□□ -0.53
PKP4-206ENST00000452162 NR3C1P04150 777 aa11.72□□□□□ -0.53
PKP4-206ENST00000452162 MYCNP04198 464 aaPredicted RBP11.72□□□□□ -0.53
PKP4-206ENST00000452162 KIF11P52732 1056 aa11.72□□□□□ -0.53
PKP4-206ENST00000452162 KCNA1Q09470 495 aa11.72□□□□□ -0.53
PKP4-206ENST00000452162 KCNH2Q12809 1159 aa11.72□□□□□ -0.53
PKP4-206ENST00000452162 ITGB3BPQ13352 177 aaPredicted RBP11.72□□□□□ -0.53
PKP4-206ENST00000452162 MAPK8IP2Q13387 824 aaPredicted RBP11.72□□□□□ -0.53
PKP4-206ENST00000452162 NFIL3Q16649 462 aa11.72□□□□□ -0.53
PKP4-206ENST00000452162 ASTE1Q2TB18 679 aaPredicted RBP11.72□□□□□ -0.53
PKP4-206ENST00000452162 HGSNATQ68CP4 663 aa11.72□□□□□ -0.53
PKP4-206ENST00000452162 CACNA2D4Q7Z3S7 1137 aa11.72□□□□□ -0.53
PKP4-206ENST00000452162 BANK1Q8NDB2 785 aa11.72□□□□□ -0.53
PKP4-206ENST00000452162 EHBP1Q8NDI1 1231 aa11.72□□□□□ -0.53
PKP4-206ENST00000452162 SCFD2Q8WU76 684 aa11.72□□□□□ -0.53
PKP4-206ENST00000452162 GOLGA1Q92805 767 aa11.72□□□□□ -0.53
PKP4-206ENST00000452162 COPS5Q92905 334 aa11.72□□□□□ -0.53
PKP4-206ENST00000452162 GANQ9H2C0 597 aa11.72□□□□□ -0.53
PKP4-206ENST00000452162 ZNF446Q9NWS9 450 aa11.72□□□□□ -0.53
PKP4-206ENST00000452162 ARMCX3Q9UH62 379 aaPredicted RBP11.72□□□□□ -0.53
PKP4-206ENST00000452162 DDX41Q9UJV9 622 aaKnown RBP11.72□□□□□ -0.53
PKP4-206ENST00000452162 ODF2LQ9ULJ1 636 aa11.72□□□□□ -0.53
PKP4-206ENST00000452162 PDE4DIPQ5VU43 2346 aa11.72□□□□□ -0.53
PKP4-206ENST00000452162 MYADML2A6NDP7 307 aa11.72□□□□□ -0.53
PKP4-206ENST00000452162 ADAMTS4O75173 837 aa11.72□□□□□ -0.53
PKP4-206ENST00000452162 AKAP3O75969 853 aa11.72□□□□□ -0.53
PKP4-206ENST00000452162 GUCY2CP25092 1073 aa11.72□□□□□ -0.53
PKP4-206ENST00000452162 NMT1P30419 496 aaKnown RBP11.72□□□□□ -0.53
PKP4-206ENST00000452162 CLCN6P51797 869 aa11.72□□□□□ -0.53
PKP4-206ENST00000452162 SPA17Q15506 151 aa11.72□□□□□ -0.53
PKP4-206ENST00000452162 WHAMMP3Q1A5X7 153 aa11.72□□□□□ -0.53
PKP4-206ENST00000452162 DUSP28Q4G0W2 176 aa11.72□□□□□ -0.53
PKP4-206ENST00000452162 TEX35Q5T0J7 233 aa11.72□□□□□ -0.53
PKP4-206ENST00000452162 DPY19L2P1Q6NXN4 242 aa11.72□□□□□ -0.53
PKP4-206ENST00000452162 CCDC62Q6P9F0 684 aa11.72□□□□□ -0.53
PKP4-206ENST00000452162 MYCT1Q8N699 235 aa11.72□□□□□ -0.53
PKP4-206ENST00000452162 GPR161Q8N6U8 529 aaKnown RBP11.72□□□□□ -0.53
PKP4-206ENST00000452162 CEP112Q8N8E3 955 aa11.72□□□□□ -0.53
PKP4-206ENST00000452162 RABGGTAQ92696 567 aa11.72□□□□□ -0.53
PKP4-206ENST00000452162 NUCKS1Q9H1E3 243 aaKnown RBP11.72□□□□□ -0.53
PKP4-206ENST00000452162 SSU72P8A0A1W2PR75 194 aa11.71□□□□□ -0.53
PKP4-206ENST00000452162 DDX39AO00148 427 aaKnown RBP11.71□□□□□ -0.53
PKP4-206ENST00000452162 TXNP10599 105 aaKnown RBP11.71□□□□□ -0.53
PKP4-206ENST00000452162 RPL13P26373 211 aaKnown RBP11.71□□□□□ -0.53
PKP4-206ENST00000452162 CHMP4BP1P59074 171 aa11.71□□□□□ -0.53
PKP4-206ENST00000452162 APBA1Q02410 837 aa11.71□□□□□ -0.53
PKP4-206ENST00000452162 MAPK7Q13164 816 aa11.71□□□□□ -0.53
PKP4-206ENST00000452162 LY6KQ17RY6 165 aa11.71□□□□□ -0.53
PKP4-206ENST00000452162 TRAPPC11Q7Z392 1133 aa11.71□□□□□ -0.53
PKP4-206ENST00000452162 MIER3Q7Z3K6 550 aa11.71□□□□□ -0.53
PKP4-206ENST00000452162 CRACR2AQ9BSW2 395 aa11.71□□□□□ -0.53
PKP4-206ENST00000452162 TSGA10Q9BZW7 698 aa11.71□□□□□ -0.53
PKP4-206ENST00000452162 NLRC4Q9NPP4 1024 aa11.71□□□□□ -0.53
PKP4-206ENST00000452162 PKD2L1Q9P0L9 805 aa11.71□□□□□ -0.53
PKP4-206ENST00000452162 PCDHA13Q9Y5I0 950 aa11.71□□□□□ -0.53
PKP4-206ENST00000452162 DYNC1LI2O43237 492 aaPredicted RBP11.71□□□□□ -0.54
PKP4-206ENST00000452162 FARP2O94887 1054 aaPredicted RBP11.71□□□□□ -0.54
PKP4-206ENST00000452162 AFPP02771 609 aaKnown RBP11.71□□□□□ -0.54
PKP4-206ENST00000452162 ZSCAN20P17040 1043 aaPredicted RBP11.71□□□□□ -0.54
PKP4-206ENST00000452162 CASP4P49662 377 aa11.71□□□□□ -0.54
PKP4-206ENST00000452162 POLR2FP61218 127 aaKnown RBP11.71□□□□□ -0.54
PKP4-206ENST00000452162 TTLL4Q14679 1199 aa11.71□□□□□ -0.54
PKP4-206ENST00000452162 ZNF720Q7Z2F6 126 aa11.71□□□□□ -0.54
PKP4-206ENST00000452162 UBE2Q1Q7Z7E8 422 aa11.71□□□□□ -0.54
PKP4-206ENST00000452162 TLK2Q86UE8 772 aa11.71□□□□□ -0.54
PKP4-206ENST00000452162 BORCS6Q96GS4 357 aa11.71□□□□□ -0.54
PKP4-206ENST00000452162 PAWRQ96IZ0 340 aaKnown RBP11.71□□□□□ -0.54
PKP4-206ENST00000452162 INPP4AQ96PE3 977 aaPredicted RBP11.71□□□□□ -0.54
PKP4-206ENST00000452162 METTL14Q9HCE5 456 aaKnown RBP11.71□□□□□ -0.54
PKP4-206ENST00000452162 MYO6Q9UM54 1294 aa11.71□□□□□ -0.54
PKP4-206ENST00000452162 ARHGEF35A5YM69 484 aa11.7□□□□□ -0.54
PKP4-206ENST00000452162 P4HBP07237 508 aaKnown RBP11.7□□□□□ -0.54
PKP4-206ENST00000452162 C6orf222P0C671 652 aaPredicted RBP11.7□□□□□ -0.54
PKP4-206ENST00000452162 EPB41P11171 864 aaKnown RBP11.7□□□□□ -0.54
PKP4-206ENST00000452162 GJA9P57773 515 aa11.7□□□□□ -0.54
PKP4-206ENST00000452162 BEX3Q00994 111 aa11.7□□□□□ -0.54
PKP4-206ENST00000452162 SP2Q02086 613 aa11.7□□□□□ -0.54
PKP4-206ENST00000452162 KIF5AQ12840 1032 aa11.7□□□□□ -0.54
PKP4-206ENST00000452162 MTMR1Q13613 665 aa11.7□□□□□ -0.54
PKP4-206ENST00000452162 ZC2HC1CQ53FD0 456 aaPredicted RBP11.7□□□□□ -0.54
PKP4-206ENST00000452162 SFMBT2Q5VUG0 894 aa11.7□□□□□ -0.54
PKP4-206ENST00000452162 PAPD7Q5XG87 772 aaKnown RBP11.7□□□□□ -0.54
PKP4-206ENST00000452162 DAW1Q8N136 415 aa11.7□□□□□ -0.54
PKP4-206ENST00000452162 ANKLE1Q8NAG6 615 aa11.7□□□□□ -0.54
PKP4-206ENST00000452162 ARRDC4Q8NCT1 418 aa11.7□□□□□ -0.54
PKP4-206ENST00000452162 STRA6Q9BX79 667 aa11.7□□□□□ -0.54
PKP4-206ENST00000452162 IFIH1Q9BYX4 1025 aaKnown RBP11.7□□□□□ -0.54
PKP4-206ENST00000452162 UPF3AQ9H1J1 476 aaKnown RBP11.7□□□□□ -0.54
PKP4-206ENST00000452162 EPC1Q9H2F5 836 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms