RNA–Protein interactions for RNA: ENST00000451964.5

CSNK1E-211, Transcript of casein kinase 1 epsilon, humanhuman

TSL 3

Gene CSNK1E, Length 873 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-211ENST00000451964 PBX3P40426 434 aa13.73□□□□□ -0.21
CSNK1E-211ENST00000451964 PDIA5Q14554 519 aa13.73□□□□□ -0.21
CSNK1E-211ENST00000451964 MXD4Q14582 209 aaPredicted RBP13.73□□□□□ -0.21
CSNK1E-211ENST00000451964 AAK1Q2M2I8 961 aa13.73□□□□□ -0.21
CSNK1E-211ENST00000451964 SPOUT1Q5T280 376 aaKnown RBP13.73□□□□□ -0.21
CSNK1E-211ENST00000451964 IFNLR1Q8IU57 520 aaPredicted RBP13.73□□□□□ -0.21
CSNK1E-211ENST00000451964 IGSF22Q8N9C0 903 aa13.73□□□□□ -0.21
CSNK1E-211ENST00000451964 COLGALT1Q8NBJ5 622 aa13.73□□□□□ -0.21
CSNK1E-211ENST00000451964 ERMNQ8TAM6 284 aa13.73□□□□□ -0.21
CSNK1E-211ENST00000451964 ADAMTS19Q8TE59 1207 aa13.73□□□□□ -0.21
CSNK1E-211ENST00000451964 POF1BQ8WVV4 589 aa13.73□□□□□ -0.21
CSNK1E-211ENST00000451964 NECAB3Q96P71 396 aaPredicted RBP13.73□□□□□ -0.21
CSNK1E-211ENST00000451964 POLR3FQ9H1D9 316 aaPredicted RBP13.73□□□□□ -0.21
CSNK1E-211ENST00000451964 FAM105AQ9NUU6 356 aa13.73□□□□□ -0.21
CSNK1E-211ENST00000451964 PCDHB12Q9Y5F1 795 aa13.73□□□□□ -0.21
CSNK1E-211ENST00000451964 PCDHGC5Q9Y5F6 944 aa13.73□□□□□ -0.21
CSNK1E-211ENST00000451964 TSPAN1O60635 241 aa13.72□□□□□ -0.21
CSNK1E-211ENST00000451964 FGF18O76093 207 aa13.72□□□□□ -0.21
CSNK1E-211ENST00000451964 KCNA5P22460 613 aa13.72□□□□□ -0.21
CSNK1E-211ENST00000451964 CDC25AP30304 524 aa13.72□□□□□ -0.21
CSNK1E-211ENST00000451964 LTBRP36941 435 aa13.72□□□□□ -0.21
CSNK1E-211ENST00000451964 CCT6AP40227 531 aaKnown RBP13.72□□□□□ -0.21
CSNK1E-211ENST00000451964 MBTD1Q05BQ5 628 aa13.72□□□□□ -0.21
CSNK1E-211ENST00000451964 POU5F1BQ06416 359 aa13.72□□□□□ -0.21
CSNK1E-211ENST00000451964 HYAL1Q12794 435 aa13.72□□□□□ -0.21
CSNK1E-211ENST00000451964 AMHR2Q16671 573 aa13.72□□□□□ -0.21
CSNK1E-211ENST00000451964 RILPL1Q5EBL4 403 aa13.72□□□□□ -0.21
CSNK1E-211ENST00000451964 LARP1BQ659C4 914 aaKnown RBP13.72□□□□□ -0.21
CSNK1E-211ENST00000451964 PADI6Q6TGC4 694 aa13.72□□□□□ -0.21
CSNK1E-211ENST00000451964 MRPL10Q7Z7H8 261 aaKnown RBP13.72□□□□□ -0.21
CSNK1E-211ENST00000451964 ABI1Q8IZP0 508 aa13.72□□□□□ -0.21
CSNK1E-211ENST00000451964 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.72□□□□□ -0.21
CSNK1E-211ENST00000451964 CCDC43Q96MW1 224 aaKnown RBP13.72□□□□□ -0.21
CSNK1E-211ENST00000451964 POLD4Q9HCU8 107 aa13.72□□□□□ -0.21
CSNK1E-211ENST00000451964 AAASQ9NRG9 546 aa13.72□□□□□ -0.21
CSNK1E-211ENST00000451964 KIAA1024Q9UPX6 916 aa13.72□□□□□ -0.21
CSNK1E-211ENST00000451964 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.72□□□□□ -0.21
CSNK1E-211ENST00000451964 PCDHB2Q9Y5E7 798 aa13.72□□□□□ -0.21
CSNK1E-211ENST00000451964 BDP1A6H8Y1 2624 aa13.72□□□□□ -0.21
CSNK1E-211ENST00000451964 H3BQ06 376 aaPredicted RBP13.71□□□□□ -0.21
CSNK1E-211ENST00000451964 INO80B-WBP1J3KQ70 363 aa13.71□□□□□ -0.21
CSNK1E-211ENST00000451964 OFD1O75665 1012 aa13.71□□□□□ -0.21
CSNK1E-211ENST00000451964 LAG3P18627 525 aa13.71□□□□□ -0.21
CSNK1E-211ENST00000451964 CYP11B2P19099 503 aa13.71□□□□□ -0.21
CSNK1E-211ENST00000451964 PRPHP41219 470 aa13.71□□□□□ -0.21
CSNK1E-211ENST00000451964 AFF1P51825 1210 aaKnown RBP13.71□□□□□ -0.21
CSNK1E-211ENST00000451964 ERVFC1P60507 584 aa13.71□□□□□ -0.21
CSNK1E-211ENST00000451964 TFDP1Q14186 410 aa13.71□□□□□ -0.21
CSNK1E-211ENST00000451964 CTC1Q2NKJ3 1217 aa13.71□□□□□ -0.21
CSNK1E-211ENST00000451964 KCNT2Q6UVM3 1135 aa13.71□□□□□ -0.21
CSNK1E-211ENST00000451964 AGMOQ6ZNB7 445 aa13.71□□□□□ -0.21
CSNK1E-211ENST00000451964 ADGRD2Q7Z7M1 963 aa13.71□□□□□ -0.21
CSNK1E-211ENST00000451964 THNSL1Q8IYQ7 743 aa13.71□□□□□ -0.21
CSNK1E-211ENST00000451964 LRRC43Q8N309 656 aa13.71□□□□□ -0.21
CSNK1E-211ENST00000451964 BSNDQ8WZ55 320 aa13.71□□□□□ -0.21
CSNK1E-211ENST00000451964 PABPC5Q96DU9 382 aaKnown RBP13.71□□□□□ -0.21
CSNK1E-211ENST00000451964 UHRF1Q96T88 793 aaPredicted RBP13.71□□□□□ -0.21
CSNK1E-211ENST00000451964 MMTAG2Q9BU76 263 aaKnown RBP13.71□□□□□ -0.21
CSNK1E-211ENST00000451964 EIF2AQ9BY44 585 aaKnown RBP13.71□□□□□ -0.21
CSNK1E-211ENST00000451964 ARHGEF35A5YM69 484 aa13.7□□□□□ -0.22
CSNK1E-211ENST00000451964 LAD1O00515 517 aa13.7□□□□□ -0.22
CSNK1E-211ENST00000451964 LINC01565O15544 149 aa13.7□□□□□ -0.22
CSNK1E-211ENST00000451964 B4GALT5O43286 388 aa13.7□□□□□ -0.22
CSNK1E-211ENST00000451964 SKIP12755 728 aa13.7□□□□□ -0.22
CSNK1E-211ENST00000451964 MUTP22033 750 aa13.7□□□□□ -0.22
CSNK1E-211ENST00000451964 RAB27AP51159 221 aa13.7□□□□□ -0.22
CSNK1E-211ENST00000451964 ATP2C1P98194 919 aaPredicted RBP13.7□□□□□ -0.22
CSNK1E-211ENST00000451964 PLCB3Q01970 1234 aa13.7□□□□□ -0.22
CSNK1E-211ENST00000451964 DLX2Q07687 328 aaPredicted RBP13.7□□□□□ -0.22
CSNK1E-211ENST00000451964 LEXMQ3ZCV2 418 aa13.7□□□□□ -0.22
CSNK1E-211ENST00000451964 HAUS3Q68CZ6 603 aa13.7□□□□□ -0.22
CSNK1E-211ENST00000451964 DTHD1Q6ZMT9 781 aa13.7□□□□□ -0.22
CSNK1E-211ENST00000451964 SMG8Q8ND04 991 aaKnown RBP13.7□□□□□ -0.22
CSNK1E-211ENST00000451964 MCPH1Q8NEM0 835 aa13.7□□□□□ -0.22
CSNK1E-211ENST00000451964 SNX29Q8TEQ0 813 aa13.7□□□□□ -0.22
CSNK1E-211ENST00000451964 CPB2Q96IY4 423 aa13.7□□□□□ -0.22
CSNK1E-211ENST00000451964 ZNF558Q96NG5 402 aa13.7□□□□□ -0.22
CSNK1E-211ENST00000451964 NFKBIZQ9BYH8 718 aa13.7□□□□□ -0.22
CSNK1E-211ENST00000451964 BHMT2Q9H2M3 363 aa13.7□□□□□ -0.22
CSNK1E-211ENST00000451964 RNF39Q9H2S5 420 aa13.7□□□□□ -0.22
CSNK1E-211ENST00000451964 IGFLR1Q9H665 355 aa13.7□□□□□ -0.22
CSNK1E-211ENST00000451964 DDX19AQ9NUU7 478 aaKnown RBP13.7□□□□□ -0.22
CSNK1E-211ENST00000451964 GTF3C3Q9Y5Q9 886 aa13.7□□□□□ -0.22
CSNK1E-211ENST00000451964 NCOR1O75376 2440 aa13.69□□□□□ -0.22
CSNK1E-211ENST00000451964 NT5C1B-RDH14C9J2C7 533 aa13.69□□□□□ -0.22
CSNK1E-211ENST00000451964 E9PMD0 336 aa13.69□□□□□ -0.22
CSNK1E-211ENST00000451964 B4GALT3O60512 393 aa13.69□□□□□ -0.22
CSNK1E-211ENST00000451964 ERLIN2O94905 339 aa13.69□□□□□ -0.22
CSNK1E-211ENST00000451964 ARF4P18085 180 aaPredicted RBP13.69□□□□□ -0.22
CSNK1E-211ENST00000451964 UBE3AQ05086 875 aa13.69□□□□□ -0.22
CSNK1E-211ENST00000451964 PCBP1Q15365 356 aaKnown RBP eCLIP13.69□□□□□ -0.22
CSNK1E-211ENST00000451964 CSPP1Q1MSJ5 1256 aa13.69□□□□□ -0.22
CSNK1E-211ENST00000451964 NOMO2Q5JPE7 1267 aa13.69□□□□□ -0.22
CSNK1E-211ENST00000451964 GLB1LQ6UWU2 654 aa13.69□□□□□ -0.22
CSNK1E-211ENST00000451964 KCNK18Q7Z418 384 aa13.69□□□□□ -0.22
CSNK1E-211ENST00000451964 SLC39A11Q8N1S5 342 aa13.69□□□□□ -0.22
CSNK1E-211ENST00000451964 TBC1D13Q9NVG8 400 aa13.69□□□□□ -0.22
CSNK1E-211ENST00000451964 CLDND1Q9NY35 253 aa13.69□□□□□ -0.22
CSNK1E-211ENST00000451964 INPP5FQ9Y2H2 1132 aa13.69□□□□□ -0.22
CSNK1E-211ENST00000451964 RALGAPA2Q2PPJ7 1873 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms