RNA–Protein interactions for RNA: ENST00000451716.5

COL27A1-202, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL27A1, Length 2,865 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-202ENST00000451716 TCEAL9Q9UHQ7 104 aa13.12□□□□□ -0.31
COL27A1-202ENST00000451716 ADAM21Q9UKJ8 722 aa13.12□□□□□ -0.31
COL27A1-202ENST00000451716 BZW2Q9Y6E2 419 aaKnown RBP13.12□□□□□ -0.31
COL27A1-202ENST00000451716 GOLGA8IPA6NC78 632 aa13.11□□□□□ -0.31
COL27A1-202ENST00000451716 GOLGA8JA6NMD2 632 aa13.11□□□□□ -0.31
COL27A1-202ENST00000451716 F8VZ95 297 aa13.11□□□□□ -0.31
COL27A1-202ENST00000451716 ZBED4O75132 1171 aa13.11□□□□□ -0.31
COL27A1-202ENST00000451716 SCP2P22307 547 aa13.11□□□□□ -0.31
COL27A1-202ENST00000451716 PRKCIP41743 596 aa13.11□□□□□ -0.31
COL27A1-202ENST00000451716 STAT1P42224 750 aa13.11□□□□□ -0.31
COL27A1-202ENST00000451716 MYL7Q01449 175 aa13.11□□□□□ -0.31
COL27A1-202ENST00000451716 ZSCAN26Q16670 478 aa13.11□□□□□ -0.31
COL27A1-202ENST00000451716 CFAP221Q4G0U5 840 aa13.11□□□□□ -0.31
COL27A1-202ENST00000451716 LNX1Q8TBB1 728 aaPredicted RBP13.11□□□□□ -0.31
COL27A1-202ENST00000451716 MKNK1Q9BUB5 465 aa13.11□□□□□ -0.31
COL27A1-202ENST00000451716 RNF146Q9NTX7 359 aa13.11□□□□□ -0.31
COL27A1-202ENST00000451716 ESYT3A0FGR9 886 aa13.11□□□□□ -0.31
COL27A1-202ENST00000451716 GTPBP10A4D1E9 387 aaKnown RBP13.11□□□□□ -0.31
COL27A1-202ENST00000451716 KCNK3O14649 394 aa13.11□□□□□ -0.31
COL27A1-202ENST00000451716 GCLMP48507 274 aa13.11□□□□□ -0.31
COL27A1-202ENST00000451716 GPS2Q13227 327 aa13.11□□□□□ -0.31
COL27A1-202ENST00000451716 XKR9Q5GH70 373 aa13.11□□□□□ -0.31
COL27A1-202ENST00000451716 FAM102BQ5T8I3 360 aa13.11□□□□□ -0.31
COL27A1-202ENST00000451716 PHLDB3Q6NSJ2 640 aa13.11□□□□□ -0.31
COL27A1-202ENST00000451716 CCDC70Q6NSX1 233 aa13.11□□□□□ -0.31
COL27A1-202ENST00000451716 NEK9Q8TD19 979 aa13.11□□□□□ -0.31
COL27A1-202ENST00000451716 GPR88Q9GZN0 384 aa13.11□□□□□ -0.31
COL27A1-202ENST00000451716 SEPT11Q9NVA2 429 aaKnown RBP13.11□□□□□ -0.31
COL27A1-202ENST00000451716 CWC15Q9P013 229 aaKnown RBP13.11□□□□□ -0.31
COL27A1-202ENST00000451716 EMSYQ7Z589 1322 aa13.11□□□□□ -0.31
COL27A1-202ENST00000451716 ABCB4P21439 1286 aa13.1□□□□□ -0.31
COL27A1-202ENST00000451716 SOX5P35711 763 aa13.1□□□□□ -0.31
COL27A1-202ENST00000451716 PPP3CAQ08209 521 aa13.1□□□□□ -0.31
COL27A1-202ENST00000451716 NFIL3Q16649 462 aa13.1□□□□□ -0.31
COL27A1-202ENST00000451716 ZNF572Q7Z3I7 529 aaPredicted RBP13.1□□□□□ -0.31
COL27A1-202ENST00000451716 HAUS6Q7Z4H7 955 aa13.1□□□□□ -0.31
COL27A1-202ENST00000451716 PALB2Q86YC2 1186 aa13.1□□□□□ -0.31
COL27A1-202ENST00000451716 PROCA1Q8NCQ7 364 aaPredicted RBP13.1□□□□□ -0.31
COL27A1-202ENST00000451716 ELMO3Q96BJ8 720 aa13.1□□□□□ -0.31
COL27A1-202ENST00000451716 HPCAL4Q9UM19 191 aa13.1□□□□□ -0.31
COL27A1-202ENST00000451716 PLS3P13797 630 aa13.1□□□□□ -0.31
COL27A1-202ENST00000451716 MCM3P25205 808 aa13.1□□□□□ -0.31
COL27A1-202ENST00000451716 BACE1P56817 501 aa13.1□□□□□ -0.31
COL27A1-202ENST00000451716 ANGEL2Q5VTE6 544 aaKnown RBP13.1□□□□□ -0.31
COL27A1-202ENST00000451716 NAIF1Q69YI7 327 aaPredicted RBP13.1□□□□□ -0.31
COL27A1-202ENST00000451716 SNRNP48Q6IEG0 339 aaKnown RBP13.1□□□□□ -0.31
COL27A1-202ENST00000451716 C8orf74Q6P047 294 aa13.1□□□□□ -0.31
COL27A1-202ENST00000451716 SND1Q7KZF4 910 aaKnown RBP eCLIP13.1□□□□□ -0.31
COL27A1-202ENST00000451716 NIPA1Q7RTP0 329 aa13.1□□□□□ -0.31
COL27A1-202ENST00000451716 OSGEPQ9NPF4 335 aa13.1□□□□□ -0.31
COL27A1-202ENST00000451716 TBC1D22BQ9NU19 505 aa13.1□□□□□ -0.31
COL27A1-202ENST00000451716 FBXL5Q9UKA1 691 aa13.1□□□□□ -0.31
COL27A1-202ENST00000451716 UBE4BO95155 1302 aa13.1□□□□□ -0.31
COL27A1-202ENST00000451716 FOXN3O00409 490 aaPredicted RBP13.1□□□□□ -0.31
COL27A1-202ENST00000451716 PEX10O60683 326 aa13.1□□□□□ -0.31
COL27A1-202ENST00000451716 GLI1P08151 1106 aa13.1□□□□□ -0.31
COL27A1-202ENST00000451716 H2AFZP0C0S5 128 aa13.1□□□□□ -0.31
COL27A1-202ENST00000451716 HSP90B2PQ58FF3 399 aa13.1□□□□□ -0.31
COL27A1-202ENST00000451716 DLK2Q6UY11 383 aa13.1□□□□□ -0.31
COL27A1-202ENST00000451716 H2AFVQ71UI9 128 aa13.1□□□□□ -0.31
COL27A1-202ENST00000451716 VPS36Q86VN1 386 aa13.1□□□□□ -0.31
COL27A1-202ENST00000451716 OLIG1Q8TAK6 271 aa13.1□□□□□ -0.31
COL27A1-202ENST00000451716 PLEKHO2Q8TD55 490 aa13.1□□□□□ -0.31
COL27A1-202ENST00000451716 KRT12Q99456 494 aa13.1□□□□□ -0.31
COL27A1-202ENST00000451716 STK33Q9BYT3 514 aa13.1□□□□□ -0.31
COL27A1-202ENST00000451716 TAS2R14Q9NYV8 317 aa13.1□□□□□ -0.31
COL27A1-202ENST00000451716 APEX2Q9UBZ4 518 aa13.1□□□□□ -0.31
COL27A1-202ENST00000451716 TSKSQ9UJT2 592 aa13.1□□□□□ -0.31
COL27A1-202ENST00000451716 CCDC169A6NNP5 214 aa13.09□□□□□ -0.31
COL27A1-202ENST00000451716 COQ9O75208 318 aa13.09□□□□□ -0.31
COL27A1-202ENST00000451716 FERP16591 822 aa13.09□□□□□ -0.31
COL27A1-202ENST00000451716 PTPRAP18433 802 aa13.09□□□□□ -0.31
COL27A1-202ENST00000451716 PAX7P23759 505 aa13.09□□□□□ -0.31
COL27A1-202ENST00000451716 GALCP54803 685 aa13.09□□□□□ -0.31
COL27A1-202ENST00000451716 RPS6KA1Q15418 735 aa13.09□□□□□ -0.31
COL27A1-202ENST00000451716 TRADDQ15628 312 aa13.09□□□□□ -0.31
COL27A1-202ENST00000451716 SUGP1Q8IWZ8 645 aaKnown RBP13.09□□□□□ -0.31
COL27A1-202ENST00000451716 INPP4AQ96PE3 977 aaPredicted RBP13.09□□□□□ -0.31
COL27A1-202ENST00000451716 ACCSQ96QU6 501 aa13.09□□□□□ -0.31
COL27A1-202ENST00000451716 UBE2TQ9NPD8 197 aaPredicted RBP13.09□□□□□ -0.31
COL27A1-202ENST00000451716 HSPBP1Q9NZL4 362 aa13.09□□□□□ -0.31
COL27A1-202ENST00000451716 STIM2Q9P246 746 aa13.09□□□□□ -0.31
COL27A1-202ENST00000451716 DBR1Q9UK59 544 aaKnown RBP13.09□□□□□ -0.31
COL27A1-202ENST00000451716 NR3C2P08235 984 aa13.09□□□□□ -0.31
COL27A1-202ENST00000451716 KRT13P13646 458 aa13.09□□□□□ -0.31
COL27A1-202ENST00000451716 LMAN1P49257 510 aa13.09□□□□□ -0.31
COL27A1-202ENST00000451716 GHRHRQ02643 423 aa13.09□□□□□ -0.31
COL27A1-202ENST00000451716 ITIH3Q06033 890 aa13.09□□□□□ -0.31
COL27A1-202ENST00000451716 ANO5Q75V66 913 aa13.09□□□□□ -0.31
COL27A1-202ENST00000451716 ARHGEF19Q8IW93 802 aa13.09□□□□□ -0.31
COL27A1-202ENST00000451716 KLHL7Q8IXQ5 586 aa13.09□□□□□ -0.31
COL27A1-202ENST00000451716 LRRC57Q8N9N7 239 aa13.09□□□□□ -0.31
COL27A1-202ENST00000451716 ZNF280CQ8ND82 737 aa13.09□□□□□ -0.31
COL27A1-202ENST00000451716 TPCN2Q8NHX9 752 aa13.09□□□□□ -0.31
COL27A1-202ENST00000451716 LMO3Q8TAP4 145 aa13.09□□□□□ -0.31
COL27A1-202ENST00000451716 GOLGA5Q8TBA6 731 aa13.09□□□□□ -0.31
COL27A1-202ENST00000451716 AENQ8WTP8 325 aaKnown RBP13.09□□□□□ -0.31
COL27A1-202ENST00000451716 SAAL1Q96ER3 474 aa13.09□□□□□ -0.31
COL27A1-202ENST00000451716 PICK1Q9NRD5 415 aa13.09□□□□□ -0.31
COL27A1-202ENST00000451716 ZNF541Q9H0D2 1346 aa13.08□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms