RNA–Protein interactions for RNA: ENST00000451053.2

VPS33A-202, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 3 BASIC

Gene VPS33A, Length 1,154 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-202ENST00000451053 PARVGQ9HBI0 331 aa14.39□□□□□ -0.11
VPS33A-202ENST00000451053 SQORQ9Y6N5 450 aa14.39□□□□□ -0.11
VPS33A-202ENST00000451053 FRMD3A2A2Y4 597 aa14.38□□□□□ -0.11
VPS33A-202ENST00000451053 SLC16A4O15374 487 aa14.38□□□□□ -0.11
VPS33A-202ENST00000451053 GTPBP6O43824 516 aaPredicted RBP14.38□□□□□ -0.11
VPS33A-202ENST00000451053 RPS6KA5O75582 802 aa14.38□□□□□ -0.11
VPS33A-202ENST00000451053 MBTD1Q05BQ5 628 aa14.38□□□□□ -0.11
VPS33A-202ENST00000451053 PAK2Q13177 524 aa14.38□□□□□ -0.11
VPS33A-202ENST00000451053 PLEKHG4Q58EX7 1191 aa14.38□□□□□ -0.11
VPS33A-202ENST00000451053 ODR4Q5SWX8 454 aa14.38□□□□□ -0.11
VPS33A-202ENST00000451053 SRGAP1Q7Z6B7 1085 aa14.38□□□□□ -0.11
VPS33A-202ENST00000451053 USP38Q8NB14 1042 aa14.38□□□□□ -0.11
VPS33A-202ENST00000451053 DBF4BQ8NFT6 615 aa14.38□□□□□ -0.11
VPS33A-202ENST00000451053 SPIRE2Q8WWL2 714 aa14.38□□□□□ -0.11
VPS33A-202ENST00000451053 NFKBIZQ9BYH8 718 aa14.38□□□□□ -0.11
VPS33A-202ENST00000451053 IFIH1Q9BYX4 1025 aaKnown RBP14.38□□□□□ -0.11
VPS33A-202ENST00000451053 C17orf75Q9HAS0 396 aa14.38□□□□□ -0.11
VPS33A-202ENST00000451053 ERVK-5Q9HDB9 667 aa14.38□□□□□ -0.11
VPS33A-202ENST00000451053 KMT5AQ9NQR1 393 aa14.38□□□□□ -0.11
VPS33A-202ENST00000451053 PANK4Q9NVE7 773 aa14.38□□□□□ -0.11
VPS33A-202ENST00000451053 TMEM63CQ9P1W3 806 aa14.38□□□□□ -0.11
VPS33A-202ENST00000451053 LARSQ9P2J5 1176 aaKnown RBP14.38□□□□□ -0.11
VPS33A-202ENST00000451053 PADI3Q9ULW8 664 aa14.38□□□□□ -0.11
VPS33A-202ENST00000451053 MYH11P35749 1972 aa14.38□□□□□ -0.11
VPS33A-202ENST00000451053 INO80B-WBP1J3KQ70 363 aa14.37□□□□□ -0.11
VPS33A-202ENST00000451053 KLRC4O43908 158 aa14.37□□□□□ -0.11
VPS33A-202ENST00000451053 GAP43P17677 238 aa14.37□□□□□ -0.11
VPS33A-202ENST00000451053 SFPQP23246 707 aaKnown RBP eCLIP14.37□□□□□ -0.11
VPS33A-202ENST00000451053 NCKAP1LP55160 1127 aa14.37□□□□□ -0.11
VPS33A-202ENST00000451053 DPYDQ12882 1025 aa14.37□□□□□ -0.11
VPS33A-202ENST00000451053 NFX1Q12986 1120 aaKnown RBP14.37□□□□□ -0.11
VPS33A-202ENST00000451053 COASYQ13057 564 aa14.37□□□□□ -0.11
VPS33A-202ENST00000451053 PNOCQ13519 176 aa14.37□□□□□ -0.11
VPS33A-202ENST00000451053 ZNF365Q70YC5 407 aa14.37□□□□□ -0.11
VPS33A-202ENST00000451053 ZBTB8OSQ8IWT0 167 aa14.37□□□□□ -0.11
VPS33A-202ENST00000451053 CCDC65Q8IXS2 484 aa14.37□□□□□ -0.11
VPS33A-202ENST00000451053 RPUSD2Q8IZ73 545 aaKnown RBP14.37□□□□□ -0.11
VPS33A-202ENST00000451053 TET1Q8NFU7 2136 aa14.37□□□□□ -0.11
VPS33A-202ENST00000451053 SEPT8Q92599 483 aa14.37□□□□□ -0.11
VPS33A-202ENST00000451053 FIZ1Q96SL8 496 aa14.37□□□□□ -0.11
VPS33A-202ENST00000451053 GDF15Q99988 308 aa14.37□□□□□ -0.11
VPS33A-202ENST00000451053 NTPCRQ9BSD7 190 aaKnown RBP14.37□□□□□ -0.11
VPS33A-202ENST00000451053 INO80BQ9C086 356 aaPredicted RBP14.37□□□□□ -0.11
VPS33A-202ENST00000451053 CCDC113Q9H0I3 377 aa14.37□□□□□ -0.11
VPS33A-202ENST00000451053 TMX1Q9H3N1 280 aa14.37□□□□□ -0.11
VPS33A-202ENST00000451053 TBC1D7Q9P0N9 293 aa14.37□□□□□ -0.11
VPS33A-202ENST00000451053 ARHGAP28Q9P2N2 729 aa14.37□□□□□ -0.11
VPS33A-202ENST00000451053 ST3GAL5Q9UNP4 418 aa14.37□□□□□ -0.11
VPS33A-202ENST00000451053 K7ENM7 598 aa14.36□□□□□ -0.11
VPS33A-202ENST00000451053 EDN1P05305 212 aa14.36□□□□□ -0.11
VPS33A-202ENST00000451053 MYL1P05976 194 aa14.36□□□□□ -0.11
VPS33A-202ENST00000451053 PFKMP08237 780 aa14.36□□□□□ -0.11
VPS33A-202ENST00000451053 NMT1P30419 496 aaKnown RBP14.36□□□□□ -0.11
VPS33A-202ENST00000451053 SMTNP53814 917 aa14.36□□□□□ -0.11
VPS33A-202ENST00000451053 POSTNQ15063 836 aa14.36□□□□□ -0.11
VPS33A-202ENST00000451053 AMHR2Q16671 573 aa14.36□□□□□ -0.11
VPS33A-202ENST00000451053 ZSCAN23Q3MJ62 389 aa14.36□□□□□ -0.11
VPS33A-202ENST00000451053 HERC4Q5GLZ8 1057 aaPredicted RBP14.36□□□□□ -0.11
VPS33A-202ENST00000451053 TMEM240Q5SV17 173 aa14.36□□□□□ -0.11
VPS33A-202ENST00000451053 CNKSR3Q6P9H4 555 aa14.36□□□□□ -0.11
VPS33A-202ENST00000451053 UNC13DQ70J99 1090 aa14.36□□□□□ -0.11
VPS33A-202ENST00000451053 TAS1R3Q7RTX0 852 aa14.36□□□□□ -0.11
VPS33A-202ENST00000451053 CATSPER4Q7RTX7 472 aa14.36□□□□□ -0.11
VPS33A-202ENST00000451053 TMEM161BQ8NDZ6 487 aa14.36□□□□□ -0.11
VPS33A-202ENST00000451053 ERCC4Q92889 916 aaPredicted RBP14.36□□□□□ -0.11
VPS33A-202ENST00000451053 HPS3Q969F9 1004 aa14.36□□□□□ -0.11
VPS33A-202ENST00000451053 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.36□□□□□ -0.11
VPS33A-202ENST00000451053 FGFBP2Q9BYJ0 223 aa14.36□□□□□ -0.11
VPS33A-202ENST00000451053 C2orf40Q9H1Z8 148 aa14.36□□□□□ -0.11
VPS33A-202ENST00000451053 SEL1LQ9UBV2 794 aa14.36□□□□□ -0.11
VPS33A-202ENST00000451053 USP20Q9Y2K6 914 aa14.36□□□□□ -0.11
VPS33A-202ENST00000451053 PVALEFA0A1B0GWK0 134 aa14.35□□□□□ -0.11
VPS33A-202ENST00000451053 TTLL13PA6NNM8 815 aa14.35□□□□□ -0.11
VPS33A-202ENST00000451053 GPR182O15218 404 aa14.35□□□□□ -0.11
VPS33A-202ENST00000451053 B4GALT5O43286 388 aa14.35□□□□□ -0.11
VPS33A-202ENST00000451053 MGEA5O60502 916 aa14.35□□□□□ -0.11
VPS33A-202ENST00000451053 TSPAN1O60635 241 aa14.35□□□□□ -0.11
VPS33A-202ENST00000451053 FGBP02675 491 aa14.35□□□□□ -0.11
VPS33A-202ENST00000451053 PRKCBP05771 671 aa14.35□□□□□ -0.11
VPS33A-202ENST00000451053 MAPTP10636 758 aaKnown RBP14.35□□□□□ -0.11
VPS33A-202ENST00000451053 EFNA5P52803 228 aa14.35□□□□□ -0.11
VPS33A-202ENST00000451053 EHHADHQ08426 723 aa14.35□□□□□ -0.11
VPS33A-202ENST00000451053 PSRC1Q6PGN9 363 aaPredicted RBP14.35□□□□□ -0.11
VPS33A-202ENST00000451053 OTOP2Q7RTS6 562 aa14.35□□□□□ -0.11
VPS33A-202ENST00000451053 HAUS6Q7Z4H7 955 aa14.35□□□□□ -0.11
VPS33A-202ENST00000451053 FAM178BQ8IXR5 827 aa14.35□□□□□ -0.11
VPS33A-202ENST00000451053 LINC01599Q8WXQ3 324 aa14.35□□□□□ -0.11
VPS33A-202ENST00000451053 APBB2Q92870 758 aa14.35□□□□□ -0.11
VPS33A-202ENST00000451053 UBE2OQ9C0C9 1292 aaKnown RBP14.35□□□□□ -0.11
VPS33A-202ENST00000451053 FZD8Q9H461 694 aa14.35□□□□□ -0.11
VPS33A-202ENST00000451053 PHLPP2Q6ZVD8 1323 aa14.35□□□□□ -0.11
VPS33A-202ENST00000451053 DENND3A2RUS2 1198 aa14.34□□□□□ -0.11
VPS33A-202ENST00000451053 K7ERI5 159 aa14.34□□□□□ -0.11
VPS33A-202ENST00000451053 ERLIN2O94905 339 aa14.34□□□□□ -0.11
VPS33A-202ENST00000451053 RPN1P04843 607 aaKnown RBP14.34□□□□□ -0.11
VPS33A-202ENST00000451053 CASP5P51878 434 aa14.34□□□□□ -0.11
VPS33A-202ENST00000451053 DSC3Q14574 896 aa14.34□□□□□ -0.11
VPS33A-202ENST00000451053 CAMK4Q16566 473 aa14.34□□□□□ -0.11
VPS33A-202ENST00000451053 MAPK6Q16659 721 aa14.34□□□□□ -0.11
VPS33A-202ENST00000451053 FAM187BQ17R55 369 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms